Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC0.23□□□□□ -2.37
Trav3-1Q5R1I8 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC0.23□□□□□ -2.37
Trav3-1Q5R1I8 Mir6406-201ENSMUST00000183592 120 ntBASIC0.23□□□□□ -2.37
Trav3-1Q5R1I8 Trav15d-3-201ENSMUST00000198604 167 ntBASIC0.23□□□□□ -2.37
Trav3-1Q5R1I8 Trav15n-3-201ENSMUST00000200498 168 ntBASIC0.23□□□□□ -2.37
Trav3-1Q5R1I8 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC0.23□□□□□ -2.37
Trav3-1Q5R1I8 Gm45226-201ENSMUST00000206602 288 ntBASIC0.23□□□□□ -2.37
Trav3-1Q5R1I8 Gm17990-201ENSMUST00000211728 553 ntBASIC0.23□□□□□ -2.37
Trav3-1Q5R1I8 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC0.23□□□□□ -2.37
Trav3-1Q5R1I8 Gm14823-201ENSMUST00000117698 238 ntBASIC0.22□□□□□ -2.37
Trav3-1Q5R1I8 Gm16218-201ENSMUST00000155424 388 ntBASIC0.22□□□□□ -2.37
Trav3-1Q5R1I8 Gm26150-201ENSMUST00000157426 151 ntBASIC0.22□□□□□ -2.37
Trav3-1Q5R1I8 Gm24773-201ENSMUST00000158513 99 ntBASIC0.22□□□□□ -2.37
Trav3-1Q5R1I8 Gm23963-201ENSMUST00000179603 77 ntBASIC0.22□□□□□ -2.37
Trav3-1Q5R1I8 Gm18667-201ENSMUST00000186523 484 ntBASIC0.22□□□□□ -2.37
Trav3-1Q5R1I8 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC0.22□□□□□ -2.37
Trav3-1Q5R1I8 Gm43898-201ENSMUST00000204456 424 ntBASIC0.22□□□□□ -2.37
Trav3-1Q5R1I8 Gm10297-201ENSMUST00000207136 651 ntBASIC0.22□□□□□ -2.37
Trav3-1Q5R1I8 Olfr1488-ps1-201ENSMUST00000207436 136 ntBASIC0.22□□□□□ -2.37
Trav3-1Q5R1I8 AC112274.2-201ENSMUST00000218436 170 ntBASIC0.22□□□□□ -2.37
Trav3-1Q5R1I8 Gm30738-201ENSMUST00000221346 502 ntBASIC0.22□□□□□ -2.37
Trav3-1Q5R1I8 AC173482.5-201ENSMUST00000224181 327 ntBASIC0.22□□□□□ -2.37
Trav3-1Q5R1I8 AC167977.2-201ENSMUST00000225676 682 ntBASIC0.22□□□□□ -2.37
Trav3-1Q5R1I8 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC0.22□□□□□ -2.37
Trav3-1Q5R1I8 Gm24536-201ENSMUST00000083144 107 ntBASIC0.22□□□□□ -2.37
Trav3-1Q5R1I8 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC0.22□□□□□ -2.37
Trav3-1Q5R1I8 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC0.22□□□□□ -2.37
Trav3-1Q5R1I8 AC125532.1-201ENSMUST00000216210 2334 ntBASIC0.22□□□□□ -2.37
Trav3-1Q5R1I8 Mir467h-201ENSMUST00000116759 121 ntBASIC0.21□□□□□ -2.38
Trav3-1Q5R1I8 Gm26303-201ENSMUST00000116845 119 ntBASIC0.21□□□□□ -2.38
Trav3-1Q5R1I8 Gm12806-201ENSMUST00000119384 268 ntBASIC0.21□□□□□ -2.38
Trav3-1Q5R1I8 Gm13396-201ENSMUST00000120617 271 ntBASIC0.21□□□□□ -2.38
Trav3-1Q5R1I8 Gm23317-201ENSMUST00000157999 129 ntBASIC0.21□□□□□ -2.38
Trav3-1Q5R1I8 Gm25334-201ENSMUST00000158036 110 ntBASIC0.21□□□□□ -2.38
Trav3-1Q5R1I8 Gm24942-201ENSMUST00000158328 114 ntBASIC0.21□□□□□ -2.38
Trav3-1Q5R1I8 Mir5104-201ENSMUST00000175319 94 ntBASIC0.21□□□□□ -2.38
Trav3-1Q5R1I8 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC0.21□□□□□ -2.38
Trav3-1Q5R1I8 Gm20257-202ENSMUST00000188643 130 ntBASIC0.21□□□□□ -2.38
Trav3-1Q5R1I8 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC0.21□□□□□ -2.38
Trav3-1Q5R1I8 Gm37869-201ENSMUST00000193385 595 ntBASIC0.21□□□□□ -2.38
Trav3-1Q5R1I8 Gm38060-201ENSMUST00000194822 464 ntBASIC0.21□□□□□ -2.38
Trav3-1Q5R1I8 Gm37089-201ENSMUST00000195616 129 ntBASIC0.21□□□□□ -2.38
Trav3-1Q5R1I8 Gm44396-201ENSMUST00000199843 114 ntBASIC0.21□□□□□ -2.38
Trav3-1Q5R1I8 AC120383.1-201ENSMUST00000221123 573 ntTSL 3 BASIC0.21□□□□□ -2.38
Trav3-1Q5R1I8 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.21□□□□□ -2.38
Trav3-1Q5R1I8 Gm23462-201ENSMUST00000083264 104 ntBASIC0.21□□□□□ -2.38
Trav3-1Q5R1I8 Gm25378-201ENSMUST00000104333 129 ntBASIC0.2□□□□□ -2.38
Trav3-1Q5R1I8 Gm11363-201ENSMUST00000121672 548 ntBASIC0.2□□□□□ -2.38
Trav3-1Q5R1I8 Gm23829-201ENSMUST00000157392 270 ntBASIC0.2□□□□□ -2.38
Trav3-1Q5R1I8 Gm24678-201ENSMUST00000158756 104 ntBASIC0.2□□□□□ -2.38
Trav3-1Q5R1I8 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC0.2□□□□□ -2.38
Trav3-1Q5R1I8 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC0.2□□□□□ -2.38
Trav3-1Q5R1I8 Gm44429-201ENSMUST00000203542 186 ntBASIC0.2□□□□□ -2.38
Trav3-1Q5R1I8 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC0.2□□□□□ -2.38
Trav3-1Q5R1I8 AC168056.1-201ENSMUST00000225270 180 ntBASIC0.2□□□□□ -2.38
Trav3-1Q5R1I8 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC0.2□□□□□ -2.38
Trav3-1Q5R1I8 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC0.19□□□□□ -2.38
Trav3-1Q5R1I8 AC127302.3-201ENSMUST00000215480 2791 ntBASIC0.19□□□□□ -2.38
Trav3-1Q5R1I8 Gm14359-201ENSMUST00000118883 424 ntBASIC0.19□□□□□ -2.38
Trav3-1Q5R1I8 Gm24892-201ENSMUST00000122747 104 ntBASIC0.19□□□□□ -2.38
Trav3-1Q5R1I8 Gm15274-201ENSMUST00000131442 291 ntBASIC0.19□□□□□ -2.38
Trav3-1Q5R1I8 Gm21979-201ENSMUST00000139887 291 ntBASIC0.19□□□□□ -2.38
Trav3-1Q5R1I8 Gm9498-201ENSMUST00000140849 291 ntBASIC0.19□□□□□ -2.38
Trav3-1Q5R1I8 Gm14368-201ENSMUST00000145305 415 ntBASIC0.19□□□□□ -2.38
Trav3-1Q5R1I8 Gm15259-201ENSMUST00000151262 291 ntBASIC0.19□□□□□ -2.38
Trav3-1Q5R1I8 Gm15279-201ENSMUST00000155593 288 ntBASIC0.19□□□□□ -2.38
Trav3-1Q5R1I8 Gm22403-201ENSMUST00000174919 84 ntBASIC0.19□□□□□ -2.38
Trav3-1Q5R1I8 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC0.19□□□□□ -2.38
Trav3-1Q5R1I8 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC0.19□□□□□ -2.38
Trav3-1Q5R1I8 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC0.19□□□□□ -2.38
Trav3-1Q5R1I8 Gm44358-201ENSMUST00000196301 98 ntBASIC0.19□□□□□ -2.38
Trav3-1Q5R1I8 Gm43602-201ENSMUST00000196772 300 ntBASIC0.19□□□□□ -2.38
Trav3-1Q5R1I8 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC0.19□□□□□ -2.38
Trav3-1Q5R1I8 AC134334.1-201ENSMUST00000214277 255 ntBASIC0.19□□□□□ -2.38
Trav3-1Q5R1I8 Olfr1005-ps1-201ENSMUST00000216207 488 ntBASIC0.19□□□□□ -2.38
Trav3-1Q5R1I8 Gm5955-201ENSMUST00000222712 219 ntBASIC0.19□□□□□ -2.38
Trav3-1Q5R1I8 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.18□□□□□ -2.38
Trav3-1Q5R1I8 Gm23010-201ENSMUST00000104151 126 ntBASIC0.18□□□□□ -2.38
Trav3-1Q5R1I8 Gm26487-201ENSMUST00000158022 94 ntBASIC0.18□□□□□ -2.38
Trav3-1Q5R1I8 Gm22765-201ENSMUST00000158371 128 ntBASIC0.18□□□□□ -2.38
Trav3-1Q5R1I8 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC0.18□□□□□ -2.38
Trav3-1Q5R1I8 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC0.18□□□□□ -2.38
Trav3-1Q5R1I8 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC0.18□□□□□ -2.38
Trav3-1Q5R1I8 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC0.18□□□□□ -2.38
Trav3-1Q5R1I8 Gm24137-201ENSMUST00000180055 79 ntBASIC0.18□□□□□ -2.38
Trav3-1Q5R1I8 Gm22391-201ENSMUST00000180356 79 ntBASIC0.18□□□□□ -2.38
Trav3-1Q5R1I8 Gm27342-201ENSMUST00000183530 109 ntBASIC0.18□□□□□ -2.38
Trav3-1Q5R1I8 Gm37713-201ENSMUST00000191746 198 ntBASIC0.18□□□□□ -2.38
Trav3-1Q5R1I8 Gm42719-201ENSMUST00000197393 355 ntBASIC0.18□□□□□ -2.38
Trav3-1Q5R1I8 Gm43026-201ENSMUST00000202972 325 ntBASIC0.18□□□□□ -2.38
Trav3-1Q5R1I8 Gm44088-201ENSMUST00000204595 237 ntBASIC0.18□□□□□ -2.38
Trav3-1Q5R1I8 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC0.18□□□□□ -2.38
Trav3-1Q5R1I8 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC0.18□□□□□ -2.38
Trav3-1Q5R1I8 AC154747.1-201ENSMUST00000225265 239 ntBASIC0.18□□□□□ -2.38
Trav3-1Q5R1I8 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC0.18□□□□□ -2.38
Trav3-1Q5R1I8 Mir19b-2-201ENSMUST00000083539 84 ntBASIC0.18□□□□□ -2.38
Trav3-1Q5R1I8 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC0.18□□□□□ -2.38
Trav3-1Q5R1I8 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC0.18□□□□□ -2.38
Trav3-1Q5R1I8 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC0.17□□□□□ -2.38
Trav3-1Q5R1I8 Gm26377-201ENSMUST00000102184 108 ntBASIC0.17□□□□□ -2.38
Retrieved 100 of 76,532 protein–RNA pairs in 75.6 ms