Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm22510-201ENSMUST00000179304 79 ntBASIC0.83□□□□□ -2.28
Trav5d-4Q5R1F6 Gm26336-201ENSMUST00000179449 79 ntBASIC0.83□□□□□ -2.28
Trav5d-4Q5R1F6 Gm26390-201ENSMUST00000179628 79 ntBASIC0.83□□□□□ -2.28
Trav5d-4Q5R1F6 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
Trav5d-4Q5R1F6 Gm29037-201ENSMUST00000189092 313 ntBASIC0.83□□□□□ -2.28
Trav5d-4Q5R1F6 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC0.83□□□□□ -2.28
Trav5d-4Q5R1F6 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC0.83□□□□□ -2.28
Trav5d-4Q5R1F6 AC160550.1-201ENSMUST00000228659 181 ntBASIC0.83□□□□□ -2.28
Trav5d-4Q5R1F6 Gm37061-201ENSMUST00000195066 3243 ntBASIC0.83□□□□□ -2.28
Trav5d-4Q5R1F6 Gm14914-201ENSMUST00000117576 2031 ntBASIC0.82□□□□□ -2.28
Trav5d-4Q5R1F6 Gm25088-201ENSMUST00000101803 79 ntBASIC0.82□□□□□ -2.28
Trav5d-4Q5R1F6 Gm23705-201ENSMUST00000104370 130 ntBASIC0.82□□□□□ -2.28
Trav5d-4Q5R1F6 Fau-ps1-201ENSMUST00000119675 252 ntBASIC0.82□□□□□ -2.28
Trav5d-4Q5R1F6 Gm14937-201ENSMUST00000119709 208 ntBASIC0.82□□□□□ -2.28
Trav5d-4Q5R1F6 Gm6568-201ENSMUST00000122274 697 ntBASIC0.82□□□□□ -2.28
Trav5d-4Q5R1F6 Gm22027-201ENSMUST00000122737 127 ntBASIC0.82□□□□□ -2.28
Trav5d-4Q5R1F6 Gm20438-201ENSMUST00000174441 329 ntBASIC0.82□□□□□ -2.28
Trav5d-4Q5R1F6 Gm20118-201ENSMUST00000187207 162 ntBASIC0.82□□□□□ -2.28
Trav5d-4Q5R1F6 Gm5116-201ENSMUST00000187732 463 ntBASIC0.82□□□□□ -2.28
Trav5d-4Q5R1F6 Gm29627-201ENSMUST00000187984 463 ntBASIC0.82□□□□□ -2.28
Trav5d-4Q5R1F6 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC0.82□□□□□ -2.28
Trav5d-4Q5R1F6 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC0.82□□□□□ -2.28
Trav5d-4Q5R1F6 Gm43004-201ENSMUST00000201872 703 ntBASIC0.82□□□□□ -2.28
Trav5d-4Q5R1F6 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC0.82□□□□□ -2.28
Trav5d-4Q5R1F6 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC0.82□□□□□ -2.28
Trav5d-4Q5R1F6 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
Trav5d-4Q5R1F6 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC0.82□□□□□ -2.28
Trav5d-4Q5R1F6 Gm45872-201ENSMUST00000209804 1584 ntBASIC0.82□□□□□ -2.28
Trav5d-4Q5R1F6 AC161250.2-201ENSMUST00000215114 3107 ntBASIC0.81□□□□□ -2.28
Trav5d-4Q5R1F6 Gm14599-201ENSMUST00000120469 474 ntBASIC0.81□□□□□ -2.28
Trav5d-4Q5R1F6 n-R5s80-201ENSMUST00000122596 111 ntBASIC0.81□□□□□ -2.28
Trav5d-4Q5R1F6 Gm12823-201ENSMUST00000134494 318 ntTSL 5 BASIC0.81□□□□□ -2.28
Trav5d-4Q5R1F6 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC0.81□□□□□ -2.28
Trav5d-4Q5R1F6 Gm26004-201ENSMUST00000158804 116 ntBASIC0.81□□□□□ -2.28
Trav5d-4Q5R1F6 Igkv17-134-201ENSMUST00000168310 348 ntBASIC0.81□□□□□ -2.28
Trav5d-4Q5R1F6 Gm24020-201ENSMUST00000180156 108 ntBASIC0.81□□□□□ -2.28
Trav5d-4Q5R1F6 Gm27894-201ENSMUST00000184177 92 ntBASIC0.81□□□□□ -2.28
Trav5d-4Q5R1F6 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC0.81□□□□□ -2.28
Trav5d-4Q5R1F6 Gm21673-201ENSMUST00000186640 436 ntBASIC0.81□□□□□ -2.28
Trav5d-4Q5R1F6 Gm21135-201ENSMUST00000189023 436 ntBASIC0.81□□□□□ -2.28
Trav5d-4Q5R1F6 Gm43529-201ENSMUST00000199178 412 ntBASIC0.81□□□□□ -2.28
Trav5d-4Q5R1F6 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC0.81□□□□□ -2.28
Trav5d-4Q5R1F6 Gm25589-201ENSMUST00000082502 166 ntBASIC0.81□□□□□ -2.28
Trav5d-4Q5R1F6 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC0.81□□□□□ -2.28
Trav5d-4Q5R1F6 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
Trav5d-4Q5R1F6 Mir544-201ENSMUST00000103813 78 ntBASIC0.8□□□□□ -2.28
Trav5d-4Q5R1F6 Gm14923-201ENSMUST00000118270 155 ntBASIC0.8□□□□□ -2.28
Trav5d-4Q5R1F6 Gm2003-201ENSMUST00000118537 636 ntBASIC0.8□□□□□ -2.28
Trav5d-4Q5R1F6 Gm15807-201ENSMUST00000119880 1128 ntBASIC0.8□□□□□ -2.28
Trav5d-4Q5R1F6 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC0.8□□□□□ -2.28
Trav5d-4Q5R1F6 Gm25059-201ENSMUST00000157367 117 ntBASIC0.8□□□□□ -2.28
Trav5d-4Q5R1F6 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
Trav5d-4Q5R1F6 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC0.8□□□□□ -2.28
Trav5d-4Q5R1F6 Gm24754-201ENSMUST00000177997 107 ntBASIC0.8□□□□□ -2.28
Trav5d-4Q5R1F6 Mir7059-201ENSMUST00000184825 59 ntBASIC0.8□□□□□ -2.28
Trav5d-4Q5R1F6 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC0.8□□□□□ -2.28
Trav5d-4Q5R1F6 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC0.8□□□□□ -2.28
Trav5d-4Q5R1F6 Gm28912-201ENSMUST00000189001 234 ntBASIC0.8□□□□□ -2.28
Trav5d-4Q5R1F6 Gm42834-201ENSMUST00000196845 256 ntBASIC0.8□□□□□ -2.28
Trav5d-4Q5R1F6 Gm43914-201ENSMUST00000203592 594 ntBASIC0.8□□□□□ -2.28
Trav5d-4Q5R1F6 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC0.8□□□□□ -2.28
Trav5d-4Q5R1F6 Gm19032-201ENSMUST00000208584 592 ntBASIC0.8□□□□□ -2.28
Trav5d-4Q5R1F6 AC153957.1-201ENSMUST00000215235 229 ntBASIC0.8□□□□□ -2.28
Trav5d-4Q5R1F6 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
Trav5d-4Q5R1F6 Gm25698-201ENSMUST00000082897 107 ntBASIC0.8□□□□□ -2.28
Trav5d-4Q5R1F6 Gm16412-201ENSMUST00000121602 273 ntBASIC0.79□□□□□ -2.28
Trav5d-4Q5R1F6 Gm23118-201ENSMUST00000122657 187 ntBASIC0.79□□□□□ -2.28
Trav5d-4Q5R1F6 Gm24892-201ENSMUST00000122747 104 ntBASIC0.79□□□□□ -2.28
Trav5d-4Q5R1F6 Gm26038-201ENSMUST00000158151 106 ntBASIC0.79□□□□□ -2.28
Trav5d-4Q5R1F6 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC0.79□□□□□ -2.28
Trav5d-4Q5R1F6 Mir6355-201ENSMUST00000183687 106 ntBASIC0.79□□□□□ -2.28
Trav5d-4Q5R1F6 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC0.79□□□□□ -2.28
Trav5d-4Q5R1F6 Gm37599-201ENSMUST00000193067 489 ntBASIC0.79□□□□□ -2.28
Trav5d-4Q5R1F6 AL450317.1-201ENSMUST00000213941 291 ntBASIC0.79□□□□□ -2.28
Trav5d-4Q5R1F6 Gm23299-201ENSMUST00000082708 79 ntBASIC0.79□□□□□ -2.28
Trav5d-4Q5R1F6 Gm25683-201ENSMUST00000083940 131 ntBASIC0.79□□□□□ -2.28
Trav5d-4Q5R1F6 Gm24431-201ENSMUST00000104073 66 ntBASIC0.78□□□□□ -2.28
Trav5d-4Q5R1F6 Gm8858-201ENSMUST00000118259 342 ntBASIC0.78□□□□□ -2.28
Trav5d-4Q5R1F6 Gm23184-201ENSMUST00000122594 131 ntBASIC0.78□□□□□ -2.28
Trav5d-4Q5R1F6 Gm23893-201ENSMUST00000158106 134 ntBASIC0.78□□□□□ -2.28
Trav5d-4Q5R1F6 Gm24942-201ENSMUST00000158328 114 ntBASIC0.78□□□□□ -2.28
Trav5d-4Q5R1F6 Gm3025-201ENSMUST00000163454 489 ntBASIC0.78□□□□□ -2.28
Trav5d-4Q5R1F6 Gm3111-201ENSMUST00000167426 490 ntBASIC0.78□□□□□ -2.28
Trav5d-4Q5R1F6 Gm24366-201ENSMUST00000175383 86 ntBASIC0.78□□□□□ -2.28
Trav5d-4Q5R1F6 Gm22290-201ENSMUST00000177655 107 ntBASIC0.78□□□□□ -2.28
Trav5d-4Q5R1F6 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC0.78□□□□□ -2.28
Trav5d-4Q5R1F6 Gm22583-201ENSMUST00000178031 107 ntBASIC0.78□□□□□ -2.28
Trav5d-4Q5R1F6 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC0.78□□□□□ -2.28
Trav5d-4Q5R1F6 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC0.78□□□□□ -2.28
Trav5d-4Q5R1F6 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC0.78□□□□□ -2.28
Trav5d-4Q5R1F6 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC0.78□□□□□ -2.28
Trav5d-4Q5R1F6 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC0.78□□□□□ -2.28
Trav5d-4Q5R1F6 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC0.78□□□□□ -2.28
Trav5d-4Q5R1F6 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC0.78□□□□□ -2.28
Trav5d-4Q5R1F6 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC0.78□□□□□ -2.28
Trav5d-4Q5R1F6 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC0.78□□□□□ -2.28
Trav5d-4Q5R1F6 Mir6380-201ENSMUST00000184334 81 ntBASIC0.78□□□□□ -2.28
Trav5d-4Q5R1F6 Gm27640-201ENSMUST00000184580 147 ntBASIC0.78□□□□□ -2.28
Trav5d-4Q5R1F6 Gm28344-201ENSMUST00000185704 279 ntBASIC0.78□□□□□ -2.28
Trav5d-4Q5R1F6 Gm28409-201ENSMUST00000187064 103 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms