Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Gm11849-201ENSMUST00000121293 261 ntBASIC1.17□□□□□ -2.22
Col27a1Q5QNQ9 Gm26102-201ENSMUST00000157251 284 ntBASIC1.17□□□□□ -2.22
Col27a1Q5QNQ9 Gm22817-201ENSMUST00000157448 356 ntBASIC1.17□□□□□ -2.22
Col27a1Q5QNQ9 Gm24997-201ENSMUST00000157910 105 ntBASIC1.17□□□□□ -2.22
Col27a1Q5QNQ9 Ear-ps8-201ENSMUST00000161935 354 ntBASIC1.17□□□□□ -2.22
Col27a1Q5QNQ9 Gm17085-201ENSMUST00000165425 502 ntBASIC1.17□□□□□ -2.22
Col27a1Q5QNQ9 Gm2966-201ENSMUST00000166052 481 ntBASIC1.17□□□□□ -2.22
Col27a1Q5QNQ9 Gm17113-201ENSMUST00000170118 171 ntBASIC1.17□□□□□ -2.22
Col27a1Q5QNQ9 Gm25020-201ENSMUST00000178071 107 ntBASIC1.17□□□□□ -2.22
Col27a1Q5QNQ9 Gm24168-201ENSMUST00000178825 107 ntBASIC1.17□□□□□ -2.22
Col27a1Q5QNQ9 Gm27722-201ENSMUST00000183908 76 ntBASIC1.17□□□□□ -2.22
Col27a1Q5QNQ9 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC1.17□□□□□ -2.22
Col27a1Q5QNQ9 Gm44825-201ENSMUST00000207557 150 ntBASIC1.17□□□□□ -2.22
Col27a1Q5QNQ9 Gm44598-201ENSMUST00000207566 150 ntBASIC1.17□□□□□ -2.22
Col27a1Q5QNQ9 CT025689.4-201ENSMUST00000225926 601 ntBASIC1.17□□□□□ -2.22
Col27a1Q5QNQ9 Gm26493-201ENSMUST00000083155 136 ntBASIC1.17□□□□□ -2.22
Col27a1Q5QNQ9 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
Col27a1Q5QNQ9 Gm22831-201ENSMUST00000102473 109 ntBASIC1.17□□□□□ -2.22
Col27a1Q5QNQ9 Gm23429-201ENSMUST00000122486 149 ntBASIC1.17□□□□□ -2.22
Col27a1Q5QNQ9 Gm25325-201ENSMUST00000122559 86 ntBASIC1.17□□□□□ -2.22
Col27a1Q5QNQ9 Gm23589-201ENSMUST00000157660 105 ntBASIC1.17□□□□□ -2.22
Col27a1Q5QNQ9 Gm26271-201ENSMUST00000158349 104 ntBASIC1.17□□□□□ -2.22
Col27a1Q5QNQ9 Gm24348-201ENSMUST00000158710 130 ntBASIC1.17□□□□□ -2.22
Col27a1Q5QNQ9 Gm15914-201ENSMUST00000161922 309 ntBASIC1.17□□□□□ -2.22
Col27a1Q5QNQ9 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC1.17□□□□□ -2.22
Col27a1Q5QNQ9 Gm25312-201ENSMUST00000178972 107 ntBASIC1.17□□□□□ -2.22
Col27a1Q5QNQ9 Gm21978-201ENSMUST00000179696 377 ntBASIC1.17□□□□□ -2.22
Col27a1Q5QNQ9 Gm27711-201ENSMUST00000183802 118 ntBASIC1.17□□□□□ -2.22
Col27a1Q5QNQ9 Gm28560-201ENSMUST00000186091 315 ntBASIC1.17□□□□□ -2.22
Col27a1Q5QNQ9 Gm28334-201ENSMUST00000186653 315 ntBASIC1.17□□□□□ -2.22
Col27a1Q5QNQ9 Gm28495-201ENSMUST00000188452 315 ntBASIC1.17□□□□□ -2.22
Col27a1Q5QNQ9 Gm28232-201ENSMUST00000188683 315 ntBASIC1.17□□□□□ -2.22
Col27a1Q5QNQ9 Gm28481-201ENSMUST00000189231 315 ntBASIC1.17□□□□□ -2.22
Col27a1Q5QNQ9 Gm28299-201ENSMUST00000189908 339 ntBASIC1.17□□□□□ -2.22
Col27a1Q5QNQ9 Gm29059-201ENSMUST00000191534 315 ntBASIC1.17□□□□□ -2.22
Col27a1Q5QNQ9 Gm37765-201ENSMUST00000192395 315 ntBASIC1.17□□□□□ -2.22
Col27a1Q5QNQ9 Gm37237-201ENSMUST00000192893 315 ntBASIC1.17□□□□□ -2.22
Col27a1Q5QNQ9 Gm36968-201ENSMUST00000193737 315 ntBASIC1.17□□□□□ -2.22
Col27a1Q5QNQ9 Gm38290-201ENSMUST00000195238 315 ntBASIC1.17□□□□□ -2.22
Col27a1Q5QNQ9 Gm9402-201ENSMUST00000196849 388 ntBASIC1.17□□□□□ -2.22
Col27a1Q5QNQ9 Gm18160-201ENSMUST00000214279 827 ntBASIC1.17□□□□□ -2.22
Col27a1Q5QNQ9 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC1.17□□□□□ -2.22
Col27a1Q5QNQ9 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
Col27a1Q5QNQ9 Gm23422-201ENSMUST00000102000 107 ntBASIC1.16□□□□□ -2.22
Col27a1Q5QNQ9 Mir582-201ENSMUST00000103758 81 ntBASIC1.16□□□□□ -2.22
Col27a1Q5QNQ9 Xlr4d-ps-201ENSMUST00000118894 646 ntBASIC1.16□□□□□ -2.22
Col27a1Q5QNQ9 Gm12309-201ENSMUST00000119889 182 ntBASIC1.16□□□□□ -2.22
Col27a1Q5QNQ9 Gm23000-201ENSMUST00000157083 139 ntBASIC1.16□□□□□ -2.22
Col27a1Q5QNQ9 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
Col27a1Q5QNQ9 Gm28283-201ENSMUST00000185509 178 ntBASIC1.16□□□□□ -2.22
Col27a1Q5QNQ9 Gm44142-201ENSMUST00000203358 311 ntBASIC1.16□□□□□ -2.22
Col27a1Q5QNQ9 Gm44794-201ENSMUST00000206550 411 ntBASIC1.16□□□□□ -2.22
Col27a1Q5QNQ9 Olfr575-201ENSMUST00000084812 957 ntBASIC1.16□□□□□ -2.22
Col27a1Q5QNQ9 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.22
Col27a1Q5QNQ9 Gm23126-201ENSMUST00000104260 134 ntBASIC1.15□□□□□ -2.22
Col27a1Q5QNQ9 Gm11359-201ENSMUST00000120039 567 ntBASIC1.15□□□□□ -2.22
Col27a1Q5QNQ9 Gm23829-201ENSMUST00000157392 270 ntBASIC1.15□□□□□ -2.22
Col27a1Q5QNQ9 Gm24288-201ENSMUST00000157630 144 ntBASIC1.15□□□□□ -2.22
Col27a1Q5QNQ9 Gm27396-201ENSMUST00000157708 58 ntBASIC1.15□□□□□ -2.22
Col27a1Q5QNQ9 Gm22315-201ENSMUST00000158010 143 ntBASIC1.15□□□□□ -2.22
Col27a1Q5QNQ9 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC1.15□□□□□ -2.22
Col27a1Q5QNQ9 Snora24-201ENSMUST00000174989 130 ntBASIC1.15□□□□□ -2.22
Col27a1Q5QNQ9 Mup-ps11-201ENSMUST00000178040 545 ntBASIC1.15□□□□□ -2.22
Col27a1Q5QNQ9 Mup-ps3-201ENSMUST00000178315 545 ntBASIC1.15□□□□□ -2.22
Col27a1Q5QNQ9 Gm24897-201ENSMUST00000179033 107 ntBASIC1.15□□□□□ -2.22
Col27a1Q5QNQ9 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC1.15□□□□□ -2.22
Col27a1Q5QNQ9 Gm42475-201ENSMUST00000201212 295 ntBASIC1.15□□□□□ -2.22
Col27a1Q5QNQ9 Gm44830-201ENSMUST00000207667 584 ntBASIC1.15□□□□□ -2.22
Col27a1Q5QNQ9 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC1.15□□□□□ -2.22
Col27a1Q5QNQ9 Gm42942-201ENSMUST00000196086 1328 ntBASIC1.15□□□□□ -2.23
Col27a1Q5QNQ9 Gm14887-201ENSMUST00000119522 663 ntBASIC1.15□□□□□ -2.23
Col27a1Q5QNQ9 Gm15266-201ENSMUST00000119635 255 ntBASIC1.15□□□□□ -2.23
Col27a1Q5QNQ9 Gm14629-201ENSMUST00000122428 144 ntBASIC1.15□□□□□ -2.23
Col27a1Q5QNQ9 Gm25102-201ENSMUST00000122479 112 ntBASIC1.15□□□□□ -2.23
Col27a1Q5QNQ9 Gm24768-201ENSMUST00000158512 94 ntBASIC1.15□□□□□ -2.23
Col27a1Q5QNQ9 Gm25166-201ENSMUST00000158909 111 ntBASIC1.15□□□□□ -2.23
Col27a1Q5QNQ9 Vmn1r-ps149-201ENSMUST00000176997 183 ntBASIC1.15□□□□□ -2.23
Col27a1Q5QNQ9 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
Col27a1Q5QNQ9 Gm45658-201ENSMUST00000209197 580 ntBASIC1.15□□□□□ -2.23
Col27a1Q5QNQ9 Olfr138-201ENSMUST00000071871 939 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
Col27a1Q5QNQ9 1700019M22Rik-201ENSMUST00000073560 354 ntBASIC1.15□□□□□ -2.23
Col27a1Q5QNQ9 Gm24490-201ENSMUST00000083803 98 ntBASIC1.15□□□□□ -2.23
Col27a1Q5QNQ9 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
Col27a1Q5QNQ9 AC134917.1-201ENSMUST00000220517 1449 ntBASIC1.14□□□□□ -2.23
Col27a1Q5QNQ9 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC1.14□□□□□ -2.23
Col27a1Q5QNQ9 Gm12806-201ENSMUST00000119384 268 ntBASIC1.14□□□□□ -2.23
Col27a1Q5QNQ9 Gm14551-201ENSMUST00000120802 256 ntBASIC1.14□□□□□ -2.23
Col27a1Q5QNQ9 Gm23331-201ENSMUST00000157423 108 ntBASIC1.14□□□□□ -2.23
Col27a1Q5QNQ9 Gm24419-201ENSMUST00000157875 332 ntBASIC1.14□□□□□ -2.23
Col27a1Q5QNQ9 Gm25335-201ENSMUST00000158043 103 ntBASIC1.14□□□□□ -2.23
Col27a1Q5QNQ9 Gm24551-201ENSMUST00000158645 92 ntBASIC1.14□□□□□ -2.23
Col27a1Q5QNQ9 Gm23196-201ENSMUST00000158806 107 ntBASIC1.14□□□□□ -2.23
Col27a1Q5QNQ9 Gm28453-203ENSMUST00000187041 189 ntBASIC1.14□□□□□ -2.23
Col27a1Q5QNQ9 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.14□□□□□ -2.23
Col27a1Q5QNQ9 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC1.14□□□□□ -2.23
Col27a1Q5QNQ9 Olfr192-203ENSMUST00000206214 1054 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
Col27a1Q5QNQ9 AC116589.7-201ENSMUST00000221061 239 ntBASIC1.14□□□□□ -2.23
Col27a1Q5QNQ9 AC164117.1-201ENSMUST00000221726 239 ntBASIC1.14□□□□□ -2.23
Col27a1Q5QNQ9 AC173482.2-201ENSMUST00000224044 750 ntBASIC1.14□□□□□ -2.23
Col27a1Q5QNQ9 AC170810.3-201ENSMUST00000226177 374 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 163.2 ms