Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 AC153864.2-201ENSMUST00000220424 292 ntBASIC1.87□□□□□ -2.11
Usp28Q5I043 Gm46312-201ENSMUST00000220961 420 ntBASIC1.87□□□□□ -2.11
Usp28Q5I043 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
Usp28Q5I043 Gm23614-201ENSMUST00000082598 107 ntBASIC1.87□□□□□ -2.11
Usp28Q5I043 Mir93-201ENSMUST00000083593 88 ntBASIC1.87□□□□□ -2.11
Usp28Q5I043 Gm13331-201ENSMUST00000117500 448 ntBASIC1.86□□□□□ -2.11
Usp28Q5I043 Gm15211-201ENSMUST00000118932 528 ntBASIC1.86□□□□□ -2.11
Usp28Q5I043 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC1.86□□□□□ -2.11
Usp28Q5I043 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC1.86□□□□□ -2.11
Usp28Q5I043 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC1.86□□□□□ -2.11
Usp28Q5I043 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC1.86□□□□□ -2.11
Usp28Q5I043 Gm24577-201ENSMUST00000158580 63 ntBASIC1.86□□□□□ -2.11
Usp28Q5I043 Gm22527-201ENSMUST00000158816 106 ntBASIC1.86□□□□□ -2.11
Usp28Q5I043 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Usp28Q5I043 Gm24084-201ENSMUST00000175173 137 ntBASIC1.86□□□□□ -2.11
Usp28Q5I043 Gm22264-201ENSMUST00000178200 107 ntBASIC1.86□□□□□ -2.11
Usp28Q5I043 Gm28740-201ENSMUST00000186142 215 ntBASIC1.86□□□□□ -2.11
Usp28Q5I043 Gm28383-201ENSMUST00000187563 139 ntBASIC1.86□□□□□ -2.11
Usp28Q5I043 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC1.86□□□□□ -2.11
Usp28Q5I043 Gm29262-201ENSMUST00000190084 196 ntBASIC1.86□□□□□ -2.11
Usp28Q5I043 Gm18291-201ENSMUST00000190791 301 ntBASIC1.86□□□□□ -2.11
Usp28Q5I043 Gm33354-201ENSMUST00000195448 906 ntBASIC1.86□□□□□ -2.11
Usp28Q5I043 Gm34073-201ENSMUST00000195736 212 ntBASIC1.86□□□□□ -2.11
Usp28Q5I043 Gm9402-201ENSMUST00000196849 388 ntBASIC1.86□□□□□ -2.11
Usp28Q5I043 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC1.86□□□□□ -2.11
Usp28Q5I043 Gm18453-201ENSMUST00000208000 626 ntBASIC1.86□□□□□ -2.11
Usp28Q5I043 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Usp28Q5I043 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Usp28Q5I043 Gm12550-201ENSMUST00000118478 329 ntBASIC1.85□□□□□ -2.11
Usp28Q5I043 Gm11359-201ENSMUST00000120039 567 ntBASIC1.85□□□□□ -2.11
Usp28Q5I043 Gm13903-201ENSMUST00000120945 193 ntBASIC1.85□□□□□ -2.11
Usp28Q5I043 Gm14709-201ENSMUST00000121225 304 ntBASIC1.85□□□□□ -2.11
Usp28Q5I043 Gm26149-201ENSMUST00000157432 108 ntBASIC1.85□□□□□ -2.11
Usp28Q5I043 Gm25335-201ENSMUST00000158043 103 ntBASIC1.85□□□□□ -2.11
Usp28Q5I043 Gm26194-201ENSMUST00000175036 71 ntBASIC1.85□□□□□ -2.11
Usp28Q5I043 Mir5101-201ENSMUST00000175181 83 ntBASIC1.85□□□□□ -2.11
Usp28Q5I043 Gm44446-201ENSMUST00000204864 255 ntBASIC1.85□□□□□ -2.11
Usp28Q5I043 Gm45815-201ENSMUST00000220241 146 ntBASIC1.85□□□□□ -2.11
Usp28Q5I043 AC124772.1-201ENSMUST00000221325 151 ntBASIC1.85□□□□□ -2.11
Usp28Q5I043 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC1.85□□□□□ -2.11
Usp28Q5I043 Gm24037-201ENSMUST00000082871 180 ntBASIC1.85□□□□□ -2.11
Usp28Q5I043 Gm26126-201ENSMUST00000083188 164 ntBASIC1.85□□□□□ -2.11
Usp28Q5I043 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Usp28Q5I043 Olfr606-203ENSMUST00000217250 2313 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
Usp28Q5I043 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.85□□□□□ -2.11
Usp28Q5I043 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Usp28Q5I043 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC1.84□□□□□ -2.11
Usp28Q5I043 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Usp28Q5I043 Gm26396-201ENSMUST00000104093 132 ntBASIC1.84□□□□□ -2.11
Usp28Q5I043 Gm14670-201ENSMUST00000117327 337 ntBASIC1.84□□□□□ -2.11
Usp28Q5I043 Gm14774-201ENSMUST00000117857 536 ntBASIC1.84□□□□□ -2.11
Usp28Q5I043 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC1.84□□□□□ -2.11
Usp28Q5I043 Gm15030-201ENSMUST00000119804 484 ntBASIC1.84□□□□□ -2.11
Usp28Q5I043 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Usp28Q5I043 Gm26102-201ENSMUST00000157251 284 ntBASIC1.84□□□□□ -2.11
Usp28Q5I043 Gm27396-201ENSMUST00000157708 58 ntBASIC1.84□□□□□ -2.11
Usp28Q5I043 Gm24419-201ENSMUST00000157875 332 ntBASIC1.84□□□□□ -2.11
Usp28Q5I043 Gm25368-201ENSMUST00000158847 131 ntBASIC1.84□□□□□ -2.11
Usp28Q5I043 Gm25162-201ENSMUST00000158906 159 ntBASIC1.84□□□□□ -2.11
Usp28Q5I043 Gm17148-201ENSMUST00000164702 249 ntBASIC1.84□□□□□ -2.11
Usp28Q5I043 Gm25707-201ENSMUST00000175120 96 ntBASIC1.84□□□□□ -2.11
Usp28Q5I043 Gm28058-201ENSMUST00000186421 264 ntBASIC1.84□□□□□ -2.11
Usp28Q5I043 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Usp28Q5I043 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
Usp28Q5I043 Mir3068-202ENSMUST00000197755 79 ntBASIC1.84□□□□□ -2.11
Usp28Q5I043 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC1.84□□□□□ -2.11
Usp28Q5I043 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Usp28Q5I043 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC1.84□□□□□ -2.11
Usp28Q5I043 Gm20102-201ENSMUST00000222445 220 ntBASIC1.84□□□□□ -2.11
Usp28Q5I043 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Usp28Q5I043 Gm25207-201ENSMUST00000093745 107 ntBASIC1.84□□□□□ -2.11
Usp28Q5I043 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
Usp28Q5I043 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
Usp28Q5I043 Gm23202-201ENSMUST00000104376 129 ntBASIC1.83□□□□□ -2.12
Usp28Q5I043 Gm16242-201ENSMUST00000117741 334 ntBASIC1.83□□□□□ -2.12
Usp28Q5I043 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC1.83□□□□□ -2.12
Usp28Q5I043 Gm15692-201ENSMUST00000152173 352 ntBASIC1.83□□□□□ -2.12
Usp28Q5I043 Gm22227-201ENSMUST00000157356 259 ntBASIC1.83□□□□□ -2.12
Usp28Q5I043 Gm24409-201ENSMUST00000157881 152 ntBASIC1.83□□□□□ -2.12
Usp28Q5I043 Ear-ps8-201ENSMUST00000161935 354 ntBASIC1.83□□□□□ -2.12
Usp28Q5I043 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC1.83□□□□□ -2.12
Usp28Q5I043 Gm26501-201ENSMUST00000178307 107 ntBASIC1.83□□□□□ -2.12
Usp28Q5I043 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
Usp28Q5I043 Gm45730-201ENSMUST00000212560 395 ntBASIC1.83□□□□□ -2.12
Usp28Q5I043 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC1.83□□□□□ -2.12
Usp28Q5I043 AC100590.3-201ENSMUST00000219355 332 ntTSL 5 BASIC1.83□□□□□ -2.12
Usp28Q5I043 AC164567.2-201ENSMUST00000219363 445 ntBASIC1.83□□□□□ -2.12
Usp28Q5I043 Gm24165-201ENSMUST00000082718 128 ntBASIC1.83□□□□□ -2.12
Usp28Q5I043 Rny3-201ENSMUST00000083011 102 ntBASIC1.83□□□□□ -2.12
Usp28Q5I043 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Usp28Q5I043 Gm24049-201ENSMUST00000102409 100 ntBASIC1.82□□□□□ -2.12
Usp28Q5I043 Gm15115-201ENSMUST00000121145 264 ntBASIC1.82□□□□□ -2.12
Usp28Q5I043 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC1.82□□□□□ -2.12
Usp28Q5I043 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC1.82□□□□□ -2.12
Usp28Q5I043 Gm25454-201ENSMUST00000157947 315 ntBASIC1.82□□□□□ -2.12
Usp28Q5I043 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.82□□□□□ -2.12
Usp28Q5I043 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.82□□□□□ -2.12
Usp28Q5I043 Mir195b-201ENSMUST00000184814 97 ntBASIC1.82□□□□□ -2.12
Usp28Q5I043 Gm37923-201ENSMUST00000191624 161 ntBASIC1.82□□□□□ -2.12
Usp28Q5I043 Gm44465-201ENSMUST00000199536 114 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms