Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Gm45730-201ENSMUST00000212560 395 ntBASIC-0.14□□□□□ -2.43
Ccdc88bQ4QRL3 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC-0.14□□□□□ -2.43
Ccdc88bQ4QRL3 CT009733.1-203ENSMUST00000224033 451 ntBASIC-0.14□□□□□ -2.43
Ccdc88bQ4QRL3 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC-0.14□□□□□ -2.43
Ccdc88bQ4QRL3 Mir126a-201ENSMUST00000083606 73 ntBASIC-0.14□□□□□ -2.43
Ccdc88bQ4QRL3 Gm23102-201ENSMUST00000083724 116 ntBASIC-0.14□□□□□ -2.43
Ccdc88bQ4QRL3 Gm22829-201ENSMUST00000083771 106 ntBASIC-0.14□□□□□ -2.43
Ccdc88bQ4QRL3 Gm22368-201ENSMUST00000102416 109 ntBASIC-0.15□□□□□ -2.43
Ccdc88bQ4QRL3 Gm25876-201ENSMUST00000104329 119 ntBASIC-0.15□□□□□ -2.43
Ccdc88bQ4QRL3 Gm21171-201ENSMUST00000180048 673 ntBASIC-0.15□□□□□ -2.43
Ccdc88bQ4QRL3 Gm25672-201ENSMUST00000180111 107 ntBASIC-0.15□□□□□ -2.43
Ccdc88bQ4QRL3 Gm42475-201ENSMUST00000201212 295 ntBASIC-0.15□□□□□ -2.43
Ccdc88bQ4QRL3 AC154262.1-201ENSMUST00000225976 286 ntBASIC-0.15□□□□□ -2.43
Ccdc88bQ4QRL3 Gm24282-201ENSMUST00000104232 66 ntBASIC-0.16□□□□□ -2.43
Ccdc88bQ4QRL3 Gm12449-201ENSMUST00000117572 234 ntBASIC-0.16□□□□□ -2.43
Ccdc88bQ4QRL3 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC-0.16□□□□□ -2.43
Ccdc88bQ4QRL3 Gm22802-201ENSMUST00000175621 89 ntBASIC-0.16□□□□□ -2.43
Ccdc88bQ4QRL3 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC-0.16□□□□□ -2.43
Ccdc88bQ4QRL3 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC-0.16□□□□□ -2.43
Ccdc88bQ4QRL3 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC-0.16□□□□□ -2.43
Ccdc88bQ4QRL3 Gm23277-201ENSMUST00000157914 136 ntBASIC-0.16□□□□□ -2.44
Ccdc88bQ4QRL3 Gm23897-201ENSMUST00000158110 158 ntBASIC-0.16□□□□□ -2.44
Ccdc88bQ4QRL3 Snord11-201ENSMUST00000158468 84 ntBASIC-0.16□□□□□ -2.44
Ccdc88bQ4QRL3 Mir3470a-201ENSMUST00000175223 77 ntBASIC-0.16□□□□□ -2.44
Ccdc88bQ4QRL3 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC-0.16□□□□□ -2.44
Ccdc88bQ4QRL3 Gm18356-201ENSMUST00000185677 623 ntBASIC-0.16□□□□□ -2.44
Ccdc88bQ4QRL3 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC-0.16□□□□□ -2.44
Ccdc88bQ4QRL3 AC160031.2-201ENSMUST00000218242 274 ntBASIC-0.16□□□□□ -2.44
Ccdc88bQ4QRL3 Gm22997-201ENSMUST00000082845 107 ntBASIC-0.16□□□□□ -2.44
Ccdc88bQ4QRL3 Gm24456-201ENSMUST00000083198 107 ntBASIC-0.16□□□□□ -2.44
Ccdc88bQ4QRL3 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC-0.16□□□□□ -2.44
Ccdc88bQ4QRL3 Gm25560-201ENSMUST00000104606 176 ntBASIC-0.17□□□□□ -2.44
Ccdc88bQ4QRL3 Gm13731-201ENSMUST00000117332 196 ntBASIC-0.17□□□□□ -2.44
Ccdc88bQ4QRL3 Gm6587-201ENSMUST00000120219 613 ntBASIC-0.17□□□□□ -2.44
Ccdc88bQ4QRL3 Gm22960-201ENSMUST00000122517 104 ntBASIC-0.17□□□□□ -2.44
Ccdc88bQ4QRL3 Gm25011-201ENSMUST00000158398 126 ntBASIC-0.17□□□□□ -2.44
Ccdc88bQ4QRL3 Vmn2r-ps62-201ENSMUST00000174119 616 ntBASIC-0.17□□□□□ -2.44
Ccdc88bQ4QRL3 Gm22114-201ENSMUST00000177756 107 ntBASIC-0.17□□□□□ -2.44
Ccdc88bQ4QRL3 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC-0.17□□□□□ -2.44
Ccdc88bQ4QRL3 Gm24218-201ENSMUST00000180163 105 ntBASIC-0.17□□□□□ -2.44
Ccdc88bQ4QRL3 Gm43171-201ENSMUST00000199882 291 ntBASIC-0.17□□□□□ -2.44
Ccdc88bQ4QRL3 Gm22061-201ENSMUST00000082557 107 ntBASIC-0.17□□□□□ -2.44
Ccdc88bQ4QRL3 Gm22299-201ENSMUST00000082663 136 ntBASIC-0.17□□□□□ -2.44
Ccdc88bQ4QRL3 Gm23690-201ENSMUST00000083036 94 ntBASIC-0.17□□□□□ -2.44
Ccdc88bQ4QRL3 Mdga2-203ENSMUST00000113942 423 ntBASIC-0.18□□□□□ -2.44
Ccdc88bQ4QRL3 Gm22077-201ENSMUST00000157594 93 ntBASIC-0.18□□□□□ -2.44
Ccdc88bQ4QRL3 Gm18358-201ENSMUST00000173179 1277 ntBASIC-0.18□□□□□ -2.44
Ccdc88bQ4QRL3 Gm27943-201ENSMUST00000184844 116 ntBASIC-0.18□□□□□ -2.44
Ccdc88bQ4QRL3 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC-0.18□□□□□ -2.44
Ccdc88bQ4QRL3 Gm44455-201ENSMUST00000200061 82 ntBASIC-0.18□□□□□ -2.44
Ccdc88bQ4QRL3 AC120540.1-201ENSMUST00000221879 324 ntBASIC-0.18□□□□□ -2.44
Ccdc88bQ4QRL3 Snord82-201ENSMUST00000082889 70 ntBASIC-0.18□□□□□ -2.44
Ccdc88bQ4QRL3 Olfr575-201ENSMUST00000084812 957 ntBASIC-0.18□□□□□ -2.44
Ccdc88bQ4QRL3 Gm28435-201ENSMUST00000185496 108 ntBASIC-0.19□□□□□ -2.44
Ccdc88bQ4QRL3 AC127371.3-201ENSMUST00000228129 415 ntBASIC-0.19□□□□□ -2.44
Ccdc88bQ4QRL3 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC-0.2□□□□□ -2.44
Ccdc88bQ4QRL3 Gm25309-201ENSMUST00000116728 126 ntBASIC-0.2□□□□□ -2.44
Ccdc88bQ4QRL3 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC-0.2□□□□□ -2.44
Ccdc88bQ4QRL3 Gm24678-201ENSMUST00000158756 104 ntBASIC-0.2□□□□□ -2.44
Ccdc88bQ4QRL3 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC-0.2□□□□□ -2.44
Ccdc88bQ4QRL3 Gm27420-201ENSMUST00000183823 79 ntBASIC-0.2□□□□□ -2.44
Ccdc88bQ4QRL3 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC-0.2□□□□□ -2.44
Ccdc88bQ4QRL3 Gm37002-201ENSMUST00000194560 373 ntBASIC-0.2□□□□□ -2.44
Ccdc88bQ4QRL3 Gm7871-201ENSMUST00000195346 618 ntBASIC-0.2□□□□□ -2.44
Ccdc88bQ4QRL3 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC-0.2□□□□□ -2.44
Ccdc88bQ4QRL3 Mir142b-201ENSMUST00000083486 115 ntBASIC-0.2□□□□□ -2.44
Ccdc88bQ4QRL3 Gm26256-201ENSMUST00000122499 186 ntBASIC-0.21□□□□□ -2.44
Ccdc88bQ4QRL3 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC-0.21□□□□□ -2.44
Ccdc88bQ4QRL3 Gm44024-201ENSMUST00000203008 476 ntBASIC-0.21□□□□□ -2.44
Ccdc88bQ4QRL3 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC-0.21□□□□□ -2.44
Ccdc88bQ4QRL3 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC-0.21□□□□□ -2.44
Ccdc88bQ4QRL3 Snord91a-201ENSMUST00000104305 93 ntBASIC-0.22□□□□□ -2.44
Ccdc88bQ4QRL3 Mrps36-ps3-201ENSMUST00000183899 305 ntBASIC-0.22□□□□□ -2.44
Ccdc88bQ4QRL3 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC-0.22□□□□□ -2.44
Ccdc88bQ4QRL3 Gm45878-201ENSMUST00000211839 241 ntBASIC-0.22□□□□□ -2.44
Ccdc88bQ4QRL3 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC-0.22□□□□□ -2.44
Ccdc88bQ4QRL3 n-R5s42-201ENSMUST00000082697 104 ntBASIC-0.22□□□□□ -2.44
Ccdc88bQ4QRL3 Snord116l9-201ENSMUST00000101891 94 ntBASIC-0.22□□□□□ -2.45
Ccdc88bQ4QRL3 Gm26504-201ENSMUST00000102033 94 ntBASIC-0.22□□□□□ -2.45
Ccdc88bQ4QRL3 Gm12797-201ENSMUST00000118645 273 ntBASIC-0.22□□□□□ -2.45
Ccdc88bQ4QRL3 Gm22234-201ENSMUST00000174906 65 ntBASIC-0.22□□□□□ -2.45
Ccdc88bQ4QRL3 Gm26502-201ENSMUST00000177732 94 ntBASIC-0.22□□□□□ -2.45
Ccdc88bQ4QRL3 Snord116l13-201ENSMUST00000177737 94 ntBASIC-0.22□□□□□ -2.45
Ccdc88bQ4QRL3 Gm25350-201ENSMUST00000177849 94 ntBASIC-0.22□□□□□ -2.45
Ccdc88bQ4QRL3 Snord116l15-201ENSMUST00000177940 94 ntBASIC-0.22□□□□□ -2.45
Ccdc88bQ4QRL3 Gm23446-201ENSMUST00000177977 94 ntBASIC-0.22□□□□□ -2.45
Ccdc88bQ4QRL3 Snord116l4-201ENSMUST00000177982 94 ntBASIC-0.22□□□□□ -2.45
Ccdc88bQ4QRL3 Gm26201-201ENSMUST00000178047 94 ntBASIC-0.22□□□□□ -2.45
Ccdc88bQ4QRL3 Gm24711-201ENSMUST00000178062 94 ntBASIC-0.22□□□□□ -2.45
Ccdc88bQ4QRL3 Gm24609-201ENSMUST00000178166 94 ntBASIC-0.22□□□□□ -2.45
Ccdc88bQ4QRL3 Gm23265-201ENSMUST00000178321 94 ntBASIC-0.22□□□□□ -2.45
Ccdc88bQ4QRL3 Gm22812-201ENSMUST00000178329 94 ntBASIC-0.22□□□□□ -2.45
Ccdc88bQ4QRL3 Snord116l3-201ENSMUST00000178370 94 ntBASIC-0.22□□□□□ -2.45
Ccdc88bQ4QRL3 Gm26246-201ENSMUST00000178388 94 ntBASIC-0.22□□□□□ -2.45
Ccdc88bQ4QRL3 Gm25155-201ENSMUST00000178450 94 ntBASIC-0.22□□□□□ -2.45
Ccdc88bQ4QRL3 Gm24760-201ENSMUST00000178530 94 ntBASIC-0.22□□□□□ -2.45
Ccdc88bQ4QRL3 Gm22285-201ENSMUST00000178576 94 ntBASIC-0.22□□□□□ -2.45
Ccdc88bQ4QRL3 Gm22417-201ENSMUST00000178656 94 ntBASIC-0.22□□□□□ -2.45
Ccdc88bQ4QRL3 Snord116l2-201ENSMUST00000178675 94 ntBASIC-0.22□□□□□ -2.45
Ccdc88bQ4QRL3 Gm26270-201ENSMUST00000178690 94 ntBASIC-0.22□□□□□ -2.45
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms