Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm22517-201ENSMUST00000158265 136 ntBASIC2.1□□□□□ -2.07
Trim40Q3UWA4 Gm22435-201ENSMUST00000158552 128 ntBASIC2.1□□□□□ -2.07
Trim40Q3UWA4 Gm23005-201ENSMUST00000158950 136 ntBASIC2.1□□□□□ -2.07
Trim40Q3UWA4 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC2.1□□□□□ -2.07
Trim40Q3UWA4 Mir7217-201ENSMUST00000200304 62 ntBASIC2.1□□□□□ -2.07
Trim40Q3UWA4 Gm43505-201ENSMUST00000200579 139 ntBASIC2.1□□□□□ -2.07
Trim40Q3UWA4 Gm43978-201ENSMUST00000203491 451 ntBASIC2.1□□□□□ -2.07
Trim40Q3UWA4 AC126267.1-201ENSMUST00000214282 284 ntBASIC2.1□□□□□ -2.07
Trim40Q3UWA4 AC150314.1-201ENSMUST00000214798 238 ntBASIC2.1□□□□□ -2.07
Trim40Q3UWA4 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.1□□□□□ -2.07
Trim40Q3UWA4 CT030182.3-201ENSMUST00000225986 582 ntBASIC2.1□□□□□ -2.07
Trim40Q3UWA4 Gm23453-201ENSMUST00000083326 106 ntBASIC2.1□□□□□ -2.07
Trim40Q3UWA4 Gm18360-201ENSMUST00000173327 1524 ntBASIC2.09□□□□□ -2.07
Trim40Q3UWA4 Gm14296-202ENSMUST00000108931 750 ntBASIC2.09□□□□□ -2.07
Trim40Q3UWA4 Gm26247-201ENSMUST00000116702 91 ntBASIC2.09□□□□□ -2.07
Trim40Q3UWA4 Gm25848-201ENSMUST00000116790 144 ntBASIC2.09□□□□□ -2.07
Trim40Q3UWA4 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC2.09□□□□□ -2.07
Trim40Q3UWA4 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC2.09□□□□□ -2.07
Trim40Q3UWA4 Gm25368-201ENSMUST00000158847 131 ntBASIC2.09□□□□□ -2.07
Trim40Q3UWA4 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC2.09□□□□□ -2.07
Trim40Q3UWA4 Gm22192-201ENSMUST00000175128 85 ntBASIC2.09□□□□□ -2.07
Trim40Q3UWA4 Gm25748-201ENSMUST00000175487 70 ntBASIC2.09□□□□□ -2.07
Trim40Q3UWA4 Gm22308-201ENSMUST00000177609 107 ntBASIC2.09□□□□□ -2.07
Trim40Q3UWA4 Gm9830-201ENSMUST00000178509 357 ntBASIC2.09□□□□□ -2.07
Trim40Q3UWA4 Gm38041-201ENSMUST00000194445 661 ntBASIC2.09□□□□□ -2.07
Trim40Q3UWA4 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC2.09□□□□□ -2.07
Trim40Q3UWA4 Gm43101-202ENSMUST00000201733 488 ntTSL 2 BASIC2.09□□□□□ -2.07
Trim40Q3UWA4 Gm44881-201ENSMUST00000205425 367 ntBASIC2.09□□□□□ -2.07
Trim40Q3UWA4 Gm40810-201ENSMUST00000219149 253 ntBASIC2.09□□□□□ -2.07
Trim40Q3UWA4 AC192333.1-201ENSMUST00000224573 376 ntBASIC2.09□□□□□ -2.07
Trim40Q3UWA4 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC2.09□□□□□ -2.07
Trim40Q3UWA4 Gm22997-201ENSMUST00000082845 107 ntBASIC2.09□□□□□ -2.07
Trim40Q3UWA4 Gm25632-201ENSMUST00000083112 85 ntBASIC2.09□□□□□ -2.07
Trim40Q3UWA4 Gm45557-201ENSMUST00000210004 1651 ntBASIC2.09□□□□□ -2.08
Trim40Q3UWA4 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC2.08□□□□□ -2.08
Trim40Q3UWA4 Gm16021-201ENSMUST00000121176 219 ntBASIC2.08□□□□□ -2.08
Trim40Q3UWA4 Gm14972-201ENSMUST00000121780 364 ntBASIC2.08□□□□□ -2.08
Trim40Q3UWA4 Gm24937-201ENSMUST00000122597 134 ntBASIC2.08□□□□□ -2.08
Trim40Q3UWA4 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC2.08□□□□□ -2.08
Trim40Q3UWA4 Gm24900-201ENSMUST00000158128 134 ntBASIC2.08□□□□□ -2.08
Trim40Q3UWA4 Ear-ps8-201ENSMUST00000161935 354 ntBASIC2.08□□□□□ -2.08
Trim40Q3UWA4 Gm25121-201ENSMUST00000179846 79 ntBASIC2.08□□□□□ -2.08
Trim40Q3UWA4 Gm26897-201ENSMUST00000180627 93 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Trim40Q3UWA4 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
Trim40Q3UWA4 Gm29229-201ENSMUST00000188874 323 ntBASIC2.08□□□□□ -2.08
Trim40Q3UWA4 Gm2719-201ENSMUST00000191929 444 ntBASIC2.08□□□□□ -2.08
Trim40Q3UWA4 Gm42570-201ENSMUST00000195937 292 ntBASIC2.08□□□□□ -2.08
Trim40Q3UWA4 Gm32222-201ENSMUST00000203296 298 ntBASIC2.08□□□□□ -2.08
Trim40Q3UWA4 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC2.08□□□□□ -2.08
Trim40Q3UWA4 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC2.08□□□□□ -2.08
Trim40Q3UWA4 Snora69-201ENSMUST00000083708 131 ntBASIC2.08□□□□□ -2.08
Trim40Q3UWA4 Gm24698-201ENSMUST00000083883 130 ntBASIC2.08□□□□□ -2.08
Trim40Q3UWA4 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC2.07□□□□□ -2.08
Trim40Q3UWA4 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Trim40Q3UWA4 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Trim40Q3UWA4 Gm13396-201ENSMUST00000120617 271 ntBASIC2.07□□□□□ -2.08
Trim40Q3UWA4 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC2.07□□□□□ -2.08
Trim40Q3UWA4 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC2.07□□□□□ -2.08
Trim40Q3UWA4 Gm25866-201ENSMUST00000158245 112 ntBASIC2.07□□□□□ -2.08
Trim40Q3UWA4 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC2.07□□□□□ -2.08
Trim40Q3UWA4 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
Trim40Q3UWA4 Gm26914-201ENSMUST00000182262 223 ntBASIC2.07□□□□□ -2.08
Trim40Q3UWA4 Igkv11-118-201ENSMUST00000199448 346 ntBASIC2.07□□□□□ -2.08
Trim40Q3UWA4 Gm9318-201ENSMUST00000222444 438 ntBASIC2.07□□□□□ -2.08
Trim40Q3UWA4 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC2.07□□□□□ -2.08
Trim40Q3UWA4 Gm6109-201ENSMUST00000223297 348 ntBASIC2.07□□□□□ -2.08
Trim40Q3UWA4 AC125311.1-201ENSMUST00000226950 220 ntBASIC2.07□□□□□ -2.08
Trim40Q3UWA4 Gm25929-201ENSMUST00000082784 107 ntBASIC2.07□□□□□ -2.08
Trim40Q3UWA4 Gm23721-201ENSMUST00000083005 107 ntBASIC2.07□□□□□ -2.08
Trim40Q3UWA4 Gm24765-201ENSMUST00000083691 103 ntBASIC2.07□□□□□ -2.08
Trim40Q3UWA4 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Trim40Q3UWA4 Gm13672-201ENSMUST00000117554 459 ntBASIC2.06□□□□□ -2.08
Trim40Q3UWA4 Gm12304-201ENSMUST00000120312 385 ntBASIC2.06□□□□□ -2.08
Trim40Q3UWA4 Gm25996-201ENSMUST00000175393 117 ntBASIC2.06□□□□□ -2.08
Trim40Q3UWA4 Mir7215-201ENSMUST00000200383 51 ntBASIC2.06□□□□□ -2.08
Trim40Q3UWA4 Gm44024-201ENSMUST00000203008 476 ntBASIC2.06□□□□□ -2.08
Trim40Q3UWA4 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC2.06□□□□□ -2.08
Trim40Q3UWA4 Gm44811-201ENSMUST00000209120 228 ntBASIC2.06□□□□□ -2.08
Trim40Q3UWA4 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC2.06□□□□□ -2.08
Trim40Q3UWA4 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC2.06□□□□□ -2.08
Trim40Q3UWA4 Gm25896-201ENSMUST00000083713 136 ntBASIC2.06□□□□□ -2.08
Trim40Q3UWA4 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Trim40Q3UWA4 Gm37296-201ENSMUST00000192728 2922 ntBASIC2.06□□□□□ -2.08
Trim40Q3UWA4 Gm43032-201ENSMUST00000197967 3123 ntBASIC2.06□□□□□ -2.08
Trim40Q3UWA4 Gm22752-201ENSMUST00000102083 109 ntBASIC2.05□□□□□ -2.08
Trim40Q3UWA4 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Trim40Q3UWA4 Gm22782-201ENSMUST00000104082 132 ntBASIC2.05□□□□□ -2.08
Trim40Q3UWA4 Gm22032-201ENSMUST00000116946 116 ntBASIC2.05□□□□□ -2.08
Trim40Q3UWA4 Gm11798-201ENSMUST00000119150 421 ntBASIC2.05□□□□□ -2.08
Trim40Q3UWA4 Gm25269-201ENSMUST00000122601 104 ntBASIC2.05□□□□□ -2.08
Trim40Q3UWA4 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Trim40Q3UWA4 Gm6956-201ENSMUST00000134724 546 ntBASIC2.05□□□□□ -2.08
Trim40Q3UWA4 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC2.05□□□□□ -2.08
Trim40Q3UWA4 Gm24504-201ENSMUST00000157679 100 ntBASIC2.05□□□□□ -2.08
Trim40Q3UWA4 Gm22538-201ENSMUST00000158169 299 ntBASIC2.05□□□□□ -2.08
Trim40Q3UWA4 Gm22534-201ENSMUST00000158173 104 ntBASIC2.05□□□□□ -2.08
Trim40Q3UWA4 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Trim40Q3UWA4 Gm25020-201ENSMUST00000178071 107 ntBASIC2.05□□□□□ -2.08
Trim40Q3UWA4 Gm27410-201ENSMUST00000183851 115 ntBASIC2.05□□□□□ -2.08
Trim40Q3UWA4 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC2.05□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 223.6 ms