Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm24084-201ENSMUST00000175173 137 ntBASIC2.05□□□□□ -2.08
Trafd1Q3UDK1 Gm23660-201ENSMUST00000178362 79 ntBASIC2.05□□□□□ -2.08
Trafd1Q3UDK1 Gm24088-201ENSMUST00000179100 79 ntBASIC2.05□□□□□ -2.08
Trafd1Q3UDK1 Gm37128-201ENSMUST00000192599 232 ntBASIC2.05□□□□□ -2.08
Trafd1Q3UDK1 Gm37361-201ENSMUST00000194345 132 ntBASIC2.05□□□□□ -2.08
Trafd1Q3UDK1 Gm43286-201ENSMUST00000197420 424 ntBASIC2.05□□□□□ -2.08
Trafd1Q3UDK1 Gm42739-201ENSMUST00000200687 226 ntBASIC2.05□□□□□ -2.08
Trafd1Q3UDK1 Gm43578-201ENSMUST00000201250 459 ntBASIC2.05□□□□□ -2.08
Trafd1Q3UDK1 Lilr4b-211ENSMUST00000219661 1143 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Trafd1Q3UDK1 AC166358.7-201ENSMUST00000221132 108 ntBASIC2.05□□□□□ -2.08
Trafd1Q3UDK1 AC125543.5-201ENSMUST00000222799 108 ntBASIC2.05□□□□□ -2.08
Trafd1Q3UDK1 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC2.05□□□□□ -2.08
Trafd1Q3UDK1 AC135292.1-201ENSMUST00000227665 204 ntBASIC2.05□□□□□ -2.08
Trafd1Q3UDK1 Gm22620-201ENSMUST00000082700 133 ntBASIC2.05□□□□□ -2.08
Trafd1Q3UDK1 Gm26154-201ENSMUST00000102339 96 ntBASIC2.04□□□□□ -2.08
Trafd1Q3UDK1 Mir669o-201ENSMUST00000103898 96 ntBASIC2.04□□□□□ -2.08
Trafd1Q3UDK1 Gm23951-201ENSMUST00000104029 132 ntBASIC2.04□□□□□ -2.08
Trafd1Q3UDK1 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.04□□□□□ -2.08
Trafd1Q3UDK1 Gm15846-201ENSMUST00000116022 320 ntBASIC2.04□□□□□ -2.08
Trafd1Q3UDK1 Gm25848-201ENSMUST00000116790 144 ntBASIC2.04□□□□□ -2.08
Trafd1Q3UDK1 Snord98-201ENSMUST00000116819 65 ntBASIC2.04□□□□□ -2.08
Trafd1Q3UDK1 Gm6954-201ENSMUST00000117416 225 ntBASIC2.04□□□□□ -2.08
Trafd1Q3UDK1 Gm14287-201ENSMUST00000121060 117 ntBASIC2.04□□□□□ -2.08
Trafd1Q3UDK1 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC2.04□□□□□ -2.08
Trafd1Q3UDK1 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Trafd1Q3UDK1 Gm24192-201ENSMUST00000157978 145 ntBASIC2.04□□□□□ -2.08
Trafd1Q3UDK1 Gm22727-201ENSMUST00000158090 116 ntBASIC2.04□□□□□ -2.08
Trafd1Q3UDK1 Gm22836-201ENSMUST00000158441 61 ntBASIC2.04□□□□□ -2.08
Trafd1Q3UDK1 Gm25162-201ENSMUST00000158906 159 ntBASIC2.04□□□□□ -2.08
Trafd1Q3UDK1 Gm22192-201ENSMUST00000175128 85 ntBASIC2.04□□□□□ -2.08
Trafd1Q3UDK1 Gm7258-201ENSMUST00000179317 300 ntBASIC2.04□□□□□ -2.08
Trafd1Q3UDK1 Gm27753-201ENSMUST00000184742 203 ntBASIC2.04□□□□□ -2.08
Trafd1Q3UDK1 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC2.04□□□□□ -2.08
Trafd1Q3UDK1 Gm28838-201ENSMUST00000186338 315 ntBASIC2.04□□□□□ -2.08
Trafd1Q3UDK1 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC2.04□□□□□ -2.08
Trafd1Q3UDK1 Gm29635-201ENSMUST00000187221 315 ntBASIC2.04□□□□□ -2.08
Trafd1Q3UDK1 Gm29026-201ENSMUST00000187787 315 ntBASIC2.04□□□□□ -2.08
Trafd1Q3UDK1 Gm28797-201ENSMUST00000188543 315 ntBASIC2.04□□□□□ -2.08
Trafd1Q3UDK1 Gm28855-201ENSMUST00000188680 315 ntBASIC2.04□□□□□ -2.08
Trafd1Q3UDK1 Gm28705-201ENSMUST00000189548 315 ntBASIC2.04□□□□□ -2.08
Trafd1Q3UDK1 Gm28939-201ENSMUST00000190351 315 ntBASIC2.04□□□□□ -2.08
Trafd1Q3UDK1 Gm28223-201ENSMUST00000190469 315 ntBASIC2.04□□□□□ -2.08
Trafd1Q3UDK1 Gm29092-201ENSMUST00000190768 315 ntBASIC2.04□□□□□ -2.08
Trafd1Q3UDK1 Gm38388-201ENSMUST00000195569 1430 ntBASIC2.04□□□□□ -2.08
Trafd1Q3UDK1 Gm43510-201ENSMUST00000197922 353 ntBASIC2.04□□□□□ -2.08
Trafd1Q3UDK1 Gm45461-201ENSMUST00000211726 4535 ntBASIC2.04□□□□□ -2.08
Trafd1Q3UDK1 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.04□□□□□ -2.08
Trafd1Q3UDK1 AC155715.1-201ENSMUST00000213575 463 ntBASIC2.04□□□□□ -2.08
Trafd1Q3UDK1 Olfr1208-203ENSMUST00000214297 2844 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Trafd1Q3UDK1 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC2.04□□□□□ -2.08
Trafd1Q3UDK1 CT485612.2-201ENSMUST00000223014 151 ntBASIC2.04□□□□□ -2.08
Trafd1Q3UDK1 Gm23404-201ENSMUST00000082543 97 ntBASIC2.04□□□□□ -2.08
Trafd1Q3UDK1 Gm25632-201ENSMUST00000083112 85 ntBASIC2.04□□□□□ -2.08
Trafd1Q3UDK1 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
Trafd1Q3UDK1 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Trafd1Q3UDK1 Gm37941-201ENSMUST00000192170 2309 ntBASIC2.03□□□□□ -2.08
Trafd1Q3UDK1 Gm42606-201ENSMUST00000114209 239 ntBASIC2.03□□□□□ -2.08
Trafd1Q3UDK1 Gm12513-201ENSMUST00000118617 352 ntBASIC2.03□□□□□ -2.08
Trafd1Q3UDK1 Gm15497-201ENSMUST00000119137 551 ntBASIC2.03□□□□□ -2.08
Trafd1Q3UDK1 Gm25321-201ENSMUST00000122558 102 ntBASIC2.03□□□□□ -2.08
Trafd1Q3UDK1 Gm22328-201ENSMUST00000158074 112 ntBASIC2.03□□□□□ -2.08
Trafd1Q3UDK1 Gm22159-201ENSMUST00000158412 130 ntBASIC2.03□□□□□ -2.08
Trafd1Q3UDK1 Gm24878-201ENSMUST00000158782 104 ntBASIC2.03□□□□□ -2.08
Trafd1Q3UDK1 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Trafd1Q3UDK1 Mir7026-201ENSMUST00000184384 67 ntBASIC2.03□□□□□ -2.08
Trafd1Q3UDK1 Mir195b-201ENSMUST00000184814 97 ntBASIC2.03□□□□□ -2.08
Trafd1Q3UDK1 Gm29296-201ENSMUST00000188146 320 ntTSL 5 BASIC2.03□□□□□ -2.08
Trafd1Q3UDK1 Gm45403-201ENSMUST00000209453 276 ntBASIC2.03□□□□□ -2.08
Trafd1Q3UDK1 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Trafd1Q3UDK1 AC129085.5-201ENSMUST00000225468 400 ntBASIC2.03□□□□□ -2.08
Trafd1Q3UDK1 Gm26457-201ENSMUST00000082678 78 ntBASIC2.03□□□□□ -2.08
Trafd1Q3UDK1 Mir125b-2-201ENSMUST00000083538 71 ntBASIC2.03□□□□□ -2.08
Trafd1Q3UDK1 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC2.03□□□□□ -2.08
Trafd1Q3UDK1 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.03□□□□□ -2.08
Trafd1Q3UDK1 AC133079.1-201ENSMUST00000220943 1881 ntBASIC2.03□□□□□ -2.09
Trafd1Q3UDK1 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.03□□□□□ -2.09
Trafd1Q3UDK1 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.09
Trafd1Q3UDK1 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Trafd1Q3UDK1 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Trafd1Q3UDK1 Gm23011-201ENSMUST00000104148 132 ntBASIC2.02□□□□□ -2.09
Trafd1Q3UDK1 Gm14269-201ENSMUST00000120455 306 ntBASIC2.02□□□□□ -2.09
Trafd1Q3UDK1 Gm14574-201ENSMUST00000120644 279 ntBASIC2.02□□□□□ -2.09
Trafd1Q3UDK1 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC2.02□□□□□ -2.09
Trafd1Q3UDK1 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC2.02□□□□□ -2.09
Trafd1Q3UDK1 Gm24481-201ENSMUST00000157210 102 ntBASIC2.02□□□□□ -2.09
Trafd1Q3UDK1 Gm23829-201ENSMUST00000157392 270 ntBASIC2.02□□□□□ -2.09
Trafd1Q3UDK1 Gm23586-201ENSMUST00000157657 123 ntBASIC2.02□□□□□ -2.09
Trafd1Q3UDK1 Gm25488-201ENSMUST00000158728 118 ntBASIC2.02□□□□□ -2.09
Trafd1Q3UDK1 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC2.02□□□□□ -2.09
Trafd1Q3UDK1 Gm23813-201ENSMUST00000175153 77 ntBASIC2.02□□□□□ -2.09
Trafd1Q3UDK1 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC2.02□□□□□ -2.09
Trafd1Q3UDK1 Mir6406-201ENSMUST00000183592 120 ntBASIC2.02□□□□□ -2.09
Trafd1Q3UDK1 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC2.02□□□□□ -2.09
Trafd1Q3UDK1 Trbv6-201ENSMUST00000193743 276 ntBASIC2.02□□□□□ -2.09
Trafd1Q3UDK1 Gm37399-201ENSMUST00000195224 416 ntBASIC2.02□□□□□ -2.09
Trafd1Q3UDK1 Gm43472-201ENSMUST00000200175 154 ntBASIC2.02□□□□□ -2.09
Trafd1Q3UDK1 Gm44938-201ENSMUST00000208614 427 ntBASIC2.02□□□□□ -2.09
Trafd1Q3UDK1 AC163646.2-201ENSMUST00000227962 141 ntBASIC2.02□□□□□ -2.09
Trafd1Q3UDK1 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Trafd1Q3UDK1 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC2.02□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 94.9 ms