Protein–RNA interactions for Protein: Q3U1J4

Ddb1, DNA damage-binding protein 1, mousemouse

Known RBP Predictions only

Length 1,140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1Q3U1J4 Gm29034-201ENSMUST00000188099 315 ntBASIC3.54□□□□□ -1.84
Ddb1Q3U1J4 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Ddb1Q3U1J4 Gm28160-201ENSMUST00000191229 315 ntBASIC3.54□□□□□ -1.84
Ddb1Q3U1J4 Gm37129-201ENSMUST00000195791 315 ntBASIC3.54□□□□□ -1.84
Ddb1Q3U1J4 Gm23370-202ENSMUST00000197008 129 ntBASIC3.54□□□□□ -1.84
Ddb1Q3U1J4 Gm9377-201ENSMUST00000207227 623 ntBASIC3.54□□□□□ -1.84
Ddb1Q3U1J4 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Ddb1Q3U1J4 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC3.54□□□□□ -1.84
Ddb1Q3U1J4 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
Ddb1Q3U1J4 Gm24316-201ENSMUST00000083041 107 ntBASIC3.54□□□□□ -1.84
Ddb1Q3U1J4 Snord14d-201ENSMUST00000083424 86 ntBASIC3.54□□□□□ -1.84
Ddb1Q3U1J4 Gm10222-201ENSMUST00000088336 294 ntBASIC3.54□□□□□ -1.84
Ddb1Q3U1J4 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Ddb1Q3U1J4 Zfp280c-204ENSMUST00000114940 3863 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
Ddb1Q3U1J4 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Ddb1Q3U1J4 Olfr800-202ENSMUST00000217094 3831 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
Ddb1Q3U1J4 AC158979.1-201ENSMUST00000223594 2252 ntBASIC3.53□□□□□ -1.84
Ddb1Q3U1J4 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Ddb1Q3U1J4 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
Ddb1Q3U1J4 Gm25728-201ENSMUST00000104525 159 ntBASIC3.53□□□□□ -1.84
Ddb1Q3U1J4 Gm13725-201ENSMUST00000122139 207 ntBASIC3.53□□□□□ -1.84
Ddb1Q3U1J4 Gm23886-201ENSMUST00000122684 313 ntBASIC3.53□□□□□ -1.84
Ddb1Q3U1J4 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC3.53□□□□□ -1.84
Ddb1Q3U1J4 Gm37162-201ENSMUST00000191708 551 ntBASIC3.53□□□□□ -1.84
Ddb1Q3U1J4 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.53□□□□□ -1.84
Ddb1Q3U1J4 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC3.53□□□□□ -1.84
Ddb1Q3U1J4 Gm22620-201ENSMUST00000082700 133 ntBASIC3.53□□□□□ -1.84
Ddb1Q3U1J4 Gm23055-201ENSMUST00000082805 94 ntBASIC3.53□□□□□ -1.84
Ddb1Q3U1J4 Mir103-2-201ENSMUST00000083629 86 ntBASIC3.53□□□□□ -1.84
Ddb1Q3U1J4 Gm13136-201ENSMUST00000121031 2950 ntBASIC3.53□□□□□ -1.84
Ddb1Q3U1J4 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Ddb1Q3U1J4 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.85
Ddb1Q3U1J4 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
Ddb1Q3U1J4 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC3.52□□□□□ -1.85
Ddb1Q3U1J4 Mir669d-201ENSMUST00000104644 121 ntBASIC3.52□□□□□ -1.85
Ddb1Q3U1J4 Ppp1r2-ps7-201ENSMUST00000140102 609 ntBASIC3.52□□□□□ -1.85
Ddb1Q3U1J4 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC3.52□□□□□ -1.85
Ddb1Q3U1J4 Gm43264-201ENSMUST00000202284 325 ntBASIC3.52□□□□□ -1.85
Ddb1Q3U1J4 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC3.52□□□□□ -1.85
Ddb1Q3U1J4 AC123803.1-201ENSMUST00000216093 189 ntBASIC3.52□□□□□ -1.85
Ddb1Q3U1J4 AC160550.3-201ENSMUST00000226818 400 ntBASIC3.52□□□□□ -1.85
Ddb1Q3U1J4 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
Ddb1Q3U1J4 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
Ddb1Q3U1J4 Gm25565-201ENSMUST00000104605 105 ntBASIC3.51□□□□□ -1.85
Ddb1Q3U1J4 Gm15714-201ENSMUST00000117168 250 ntBASIC3.51□□□□□ -1.85
Ddb1Q3U1J4 Gm14020-201ENSMUST00000118165 662 ntBASIC3.51□□□□□ -1.85
Ddb1Q3U1J4 Gm12956-201ENSMUST00000122184 414 ntBASIC3.51□□□□□ -1.85
Ddb1Q3U1J4 Gm23759-201ENSMUST00000158351 268 ntBASIC3.51□□□□□ -1.85
Ddb1Q3U1J4 Gm24501-201ENSMUST00000158452 62 ntBASIC3.51□□□□□ -1.85
Ddb1Q3U1J4 Gm23921-201ENSMUST00000175258 107 ntBASIC3.51□□□□□ -1.85
Ddb1Q3U1J4 Gm43286-201ENSMUST00000197420 424 ntBASIC3.51□□□□□ -1.85
Ddb1Q3U1J4 Gm44960-201ENSMUST00000207403 141 ntBASIC3.51□□□□□ -1.85
Ddb1Q3U1J4 Gm45778-201ENSMUST00000211959 153 ntBASIC3.51□□□□□ -1.85
Ddb1Q3U1J4 Gm18000-201ENSMUST00000212153 800 ntBASIC3.51□□□□□ -1.85
Ddb1Q3U1J4 AC122225.1-201ENSMUST00000215641 369 ntBASIC3.51□□□□□ -1.85
Ddb1Q3U1J4 Gm23845-201ENSMUST00000083834 152 ntBASIC3.51□□□□□ -1.85
Ddb1Q3U1J4 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Ddb1Q3U1J4 Vmn2r81-201ENSMUST00000020547 3276 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Ddb1Q3U1J4 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.5□□□□□ -1.85
Ddb1Q3U1J4 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Ddb1Q3U1J4 Gm38211-201ENSMUST00000192814 7217 ntBASIC3.5□□□□□ -1.85
Ddb1Q3U1J4 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Ddb1Q3U1J4 Gm23889-201ENSMUST00000122689 104 ntBASIC3.5□□□□□ -1.85
Ddb1Q3U1J4 Gm24858-201ENSMUST00000158058 323 ntBASIC3.5□□□□□ -1.85
Ddb1Q3U1J4 Gm27579-201ENSMUST00000158113 63 ntBASIC3.5□□□□□ -1.85
Ddb1Q3U1J4 Gm25643-201ENSMUST00000158874 103 ntBASIC3.5□□□□□ -1.85
Ddb1Q3U1J4 Gm27220-201ENSMUST00000183453 262 ntBASIC3.5□□□□□ -1.85
Ddb1Q3U1J4 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC3.5□□□□□ -1.85
Ddb1Q3U1J4 Gm2719-201ENSMUST00000191929 444 ntBASIC3.5□□□□□ -1.85
Ddb1Q3U1J4 Gm45313-201ENSMUST00000210584 178 ntBASIC3.5□□□□□ -1.85
Ddb1Q3U1J4 AC105958.2-201ENSMUST00000214167 191 ntBASIC3.5□□□□□ -1.85
Ddb1Q3U1J4 AC163033.1-201ENSMUST00000218608 157 ntBASIC3.5□□□□□ -1.85
Ddb1Q3U1J4 AC122418.1-201ENSMUST00000225012 511 ntBASIC3.5□□□□□ -1.85
Ddb1Q3U1J4 AC124524.1-201ENSMUST00000225833 181 ntBASIC3.5□□□□□ -1.85
Ddb1Q3U1J4 AC123533.1-201ENSMUST00000227782 446 ntBASIC3.5□□□□□ -1.85
Ddb1Q3U1J4 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
Ddb1Q3U1J4 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Ddb1Q3U1J4 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Ddb1Q3U1J4 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Ddb1Q3U1J4 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Ddb1Q3U1J4 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.49□□□□□ -1.85
Ddb1Q3U1J4 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC3.49□□□□□ -1.85
Ddb1Q3U1J4 Gm26015-201ENSMUST00000104402 125 ntBASIC3.49□□□□□ -1.85
Ddb1Q3U1J4 Gm16171-201ENSMUST00000118004 324 ntBASIC3.49□□□□□ -1.85
Ddb1Q3U1J4 Gm11936-201ENSMUST00000118323 160 ntBASIC3.49□□□□□ -1.85
Ddb1Q3U1J4 Gm43600-201ENSMUST00000202134 223 ntBASIC3.49□□□□□ -1.85
Ddb1Q3U1J4 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC3.49□□□□□ -1.85
Ddb1Q3U1J4 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC3.49□□□□□ -1.85
Ddb1Q3U1J4 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC3.49□□□□□ -1.85
Ddb1Q3U1J4 AC165284.1-201ENSMUST00000228614 458 ntBASIC3.49□□□□□ -1.85
Ddb1Q3U1J4 Gm24042-201ENSMUST00000083114 103 ntBASIC3.49□□□□□ -1.85
Ddb1Q3U1J4 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Ddb1Q3U1J4 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
Ddb1Q3U1J4 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Ddb1Q3U1J4 Gm23551-201ENSMUST00000116852 121 ntBASIC3.48□□□□□ -1.85
Ddb1Q3U1J4 Gm6574-201ENSMUST00000120037 362 ntBASIC3.48□□□□□ -1.85
Ddb1Q3U1J4 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC3.48□□□□□ -1.85
Ddb1Q3U1J4 Gm24210-201ENSMUST00000158263 133 ntBASIC3.48□□□□□ -1.85
Ddb1Q3U1J4 Gm17100-201ENSMUST00000168963 272 ntBASIC3.48□□□□□ -1.85
Ddb1Q3U1J4 Gm27648-201ENSMUST00000184315 107 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 167.2 ms