Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC3.09□□□□□ -1.91
Col8a1Q00780 Gm23231-201ENSMUST00000157299 104 ntBASIC3.09□□□□□ -1.91
Col8a1Q00780 Gm22139-201ENSMUST00000158747 105 ntBASIC3.09□□□□□ -1.91
Col8a1Q00780 Gm27718-201ENSMUST00000183721 86 ntBASIC3.09□□□□□ -1.91
Col8a1Q00780 Gm27308-201ENSMUST00000184807 233 ntBASIC3.09□□□□□ -1.91
Col8a1Q00780 Gm38088-201ENSMUST00000195829 241 ntBASIC3.09□□□□□ -1.91
Col8a1Q00780 Gm18015-201ENSMUST00000214879 316 ntBASIC3.09□□□□□ -1.91
Col8a1Q00780 Gm22620-201ENSMUST00000082700 133 ntBASIC3.09□□□□□ -1.91
Col8a1Q00780 Gm23453-201ENSMUST00000083326 106 ntBASIC3.09□□□□□ -1.91
Col8a1Q00780 Gm24164-201ENSMUST00000093663 104 ntBASIC3.09□□□□□ -1.91
Col8a1Q00780 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
Col8a1Q00780 Syne2-210ENSMUST00000143031 21704 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.92
Col8a1Q00780 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.92
Col8a1Q00780 Slc9c1-201ENSMUST00000159945 3836 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
Col8a1Q00780 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC3.09□□□□□ -1.92
Col8a1Q00780 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
Col8a1Q00780 Gm36960-201ENSMUST00000195491 2035 ntBASIC3.09□□□□□ -1.92
Col8a1Q00780 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Col8a1Q00780 Gm44049-201ENSMUST00000204905 2984 ntBASIC3.08□□□□□ -1.92
Col8a1Q00780 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Col8a1Q00780 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Col8a1Q00780 Gm10959-201ENSMUST00000106431 72 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Col8a1Q00780 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC3.08□□□□□ -1.92
Col8a1Q00780 Gm14816-201ENSMUST00000117174 294 ntBASIC3.08□□□□□ -1.92
Col8a1Q00780 Gm13797-201ENSMUST00000121792 120 ntBASIC3.08□□□□□ -1.92
Col8a1Q00780 Gm14161-201ENSMUST00000137020 339 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Col8a1Q00780 Gm16327-201ENSMUST00000137146 228 ntBASIC3.08□□□□□ -1.92
Col8a1Q00780 Gm24054-201ENSMUST00000158619 105 ntBASIC3.08□□□□□ -1.92
Col8a1Q00780 Gm16546-201ENSMUST00000159442 355 ntBASIC3.08□□□□□ -1.92
Col8a1Q00780 Gm27580-201ENSMUST00000183666 149 ntBASIC3.08□□□□□ -1.92
Col8a1Q00780 Gm27753-201ENSMUST00000184742 203 ntBASIC3.08□□□□□ -1.92
Col8a1Q00780 Gm29005-201ENSMUST00000186773 320 ntBASIC3.08□□□□□ -1.92
Col8a1Q00780 Gm9377-201ENSMUST00000207227 623 ntBASIC3.08□□□□□ -1.92
Col8a1Q00780 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC3.08□□□□□ -1.92
Col8a1Q00780 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Col8a1Q00780 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Col8a1Q00780 B3galt2-201ENSMUST00000038252 9288 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Col8a1Q00780 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC3.08□□□□□ -1.92
Col8a1Q00780 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Col8a1Q00780 AC161254.1-201ENSMUST00000220310 3842 ntBASIC3.08□□□□□ -1.92
Col8a1Q00780 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Col8a1Q00780 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC3.07□□□□□ -1.92
Col8a1Q00780 Gm43047-201ENSMUST00000200089 3460 ntBASIC3.07□□□□□ -1.92
Col8a1Q00780 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Col8a1Q00780 Gm18609-201ENSMUST00000203370 3601 ntBASIC3.07□□□□□ -1.92
Col8a1Q00780 AC104897.1-201ENSMUST00000222638 3628 ntBASIC3.07□□□□□ -1.92
Col8a1Q00780 Mir669b-201ENSMUST00000102172 97 ntBASIC3.07□□□□□ -1.92
Col8a1Q00780 Gm23013-201ENSMUST00000104146 106 ntBASIC3.07□□□□□ -1.92
Col8a1Q00780 Gm25308-201ENSMUST00000104171 158 ntBASIC3.07□□□□□ -1.92
Col8a1Q00780 Gm15466-201ENSMUST00000122299 333 ntBASIC3.07□□□□□ -1.92
Col8a1Q00780 Gm22561-201ENSMUST00000157331 84 ntBASIC3.07□□□□□ -1.92
Col8a1Q00780 Gm23536-201ENSMUST00000157541 134 ntBASIC3.07□□□□□ -1.92
Col8a1Q00780 Gm22212-201ENSMUST00000158096 106 ntBASIC3.07□□□□□ -1.92
Col8a1Q00780 Gm26403-201ENSMUST00000158500 105 ntBASIC3.07□□□□□ -1.92
Col8a1Q00780 Mir3103-201ENSMUST00000175474 67 ntBASIC3.07□□□□□ -1.92
Col8a1Q00780 Gm22908-201ENSMUST00000177620 110 ntBASIC3.07□□□□□ -1.92
Col8a1Q00780 Gm22108-201ENSMUST00000177961 106 ntBASIC3.07□□□□□ -1.92
Col8a1Q00780 Gm24798-201ENSMUST00000179334 106 ntBASIC3.07□□□□□ -1.92
Col8a1Q00780 Mir6905-201ENSMUST00000184228 70 ntBASIC3.07□□□□□ -1.92
Col8a1Q00780 Mir6916-201ENSMUST00000184514 63 ntBASIC3.07□□□□□ -1.92
Col8a1Q00780 Mir6383-201ENSMUST00000184545 116 ntBASIC3.07□□□□□ -1.92
Col8a1Q00780 Gm27952-201ENSMUST00000184748 105 ntBASIC3.07□□□□□ -1.92
Col8a1Q00780 Gm28358-202ENSMUST00000189292 223 ntBASIC3.07□□□□□ -1.92
Col8a1Q00780 Gm44338-201ENSMUST00000198614 110 ntBASIC3.07□□□□□ -1.92
Col8a1Q00780 Gm43932-201ENSMUST00000204499 52 ntBASIC3.07□□□□□ -1.92
Col8a1Q00780 Gm9370-201ENSMUST00000222787 609 ntBASIC3.07□□□□□ -1.92
Col8a1Q00780 AC165106.2-201ENSMUST00000226749 97 ntBASIC3.07□□□□□ -1.92
Col8a1Q00780 Snora2b-201ENSMUST00000084005 137 ntBASIC3.07□□□□□ -1.92
Col8a1Q00780 4930415L06Rik-201ENSMUST00000088146 2617 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
Col8a1Q00780 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
Col8a1Q00780 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
Col8a1Q00780 Gm37645-201ENSMUST00000194285 3556 ntBASIC3.06□□□□□ -1.92
Col8a1Q00780 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Col8a1Q00780 Gm24936-201ENSMUST00000122598 247 ntBASIC3.06□□□□□ -1.92
Col8a1Q00780 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC3.06□□□□□ -1.92
Col8a1Q00780 Gm24014-201ENSMUST00000157728 157 ntBASIC3.06□□□□□ -1.92
Col8a1Q00780 Gm24213-201ENSMUST00000158255 258 ntBASIC3.06□□□□□ -1.92
Col8a1Q00780 Mir3092-201ENSMUST00000174954 96 ntBASIC3.06□□□□□ -1.92
Col8a1Q00780 Mir3070b-201ENSMUST00000175205 89 ntBASIC3.06□□□□□ -1.92
Col8a1Q00780 Gm20693-201ENSMUST00000177431 211 ntBASIC3.06□□□□□ -1.92
Col8a1Q00780 Ang-ps3-201ENSMUST00000177964 433 ntBASIC3.06□□□□□ -1.92
Col8a1Q00780 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC3.06□□□□□ -1.92
Col8a1Q00780 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC3.06□□□□□ -1.92
Col8a1Q00780 Gm42988-201ENSMUST00000198116 225 ntBASIC3.06□□□□□ -1.92
Col8a1Q00780 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC3.06□□□□□ -1.92
Col8a1Q00780 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
Col8a1Q00780 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
Col8a1Q00780 Gm35405-201ENSMUST00000218754 400 ntBASIC3.06□□□□□ -1.92
Col8a1Q00780 CU062626.2-201ENSMUST00000223953 274 ntBASIC3.06□□□□□ -1.92
Col8a1Q00780 Gm8508-201ENSMUST00000061226 363 ntBASIC3.06□□□□□ -1.92
Col8a1Q00780 Cd52-201ENSMUST00000000696 514 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
Col8a1Q00780 Gm23462-201ENSMUST00000083264 104 ntBASIC3.06□□□□□ -1.92
Col8a1Q00780 Gm37848-201ENSMUST00000195288 3103 ntBASIC3.06□□□□□ -1.92
Col8a1Q00780 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
Col8a1Q00780 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
Col8a1Q00780 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
Col8a1Q00780 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Col8a1Q00780 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
Col8a1Q00780 Olfr1404-203ENSMUST00000217374 3686 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
Col8a1Q00780 AC132237.1-201ENSMUST00000220950 4475 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 134 ms