Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 AC188459.1-201ENSMUST00000216651 300 ntBASIC1.4□□□□□ -2.19
Trim43bP86448 AC159203.2-201ENSMUST00000221326 193 ntBASIC1.4□□□□□ -2.19
Trim43bP86448 Gm22229-201ENSMUST00000082987 108 ntBASIC1.4□□□□□ -2.19
Trim43bP86448 Gm24268-201ENSMUST00000082990 110 ntBASIC1.4□□□□□ -2.19
Trim43bP86448 Gm23448-201ENSMUST00000083151 104 ntBASIC1.4□□□□□ -2.19
Trim43bP86448 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.4□□□□□ -2.19
Trim43bP86448 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Trim43bP86448 Mir465c-2-201ENSMUST00000104757 81 ntBASIC1.39□□□□□ -2.19
Trim43bP86448 Gm14366-201ENSMUST00000121970 730 ntBASIC1.39□□□□□ -2.19
Trim43bP86448 Gm23184-201ENSMUST00000122594 131 ntBASIC1.39□□□□□ -2.19
Trim43bP86448 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC1.39□□□□□ -2.19
Trim43bP86448 Gm23981-201ENSMUST00000157136 106 ntBASIC1.39□□□□□ -2.19
Trim43bP86448 Snord87-201ENSMUST00000175437 87 ntBASIC1.39□□□□□ -2.19
Trim43bP86448 Gm23267-201ENSMUST00000178490 132 ntBASIC1.39□□□□□ -2.19
Trim43bP86448 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC1.39□□□□□ -2.19
Trim43bP86448 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC1.39□□□□□ -2.19
Trim43bP86448 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC1.39□□□□□ -2.19
Trim43bP86448 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC1.39□□□□□ -2.19
Trim43bP86448 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC1.39□□□□□ -2.19
Trim43bP86448 AC132954.1-201ENSMUST00000221017 342 ntBASIC1.39□□□□□ -2.19
Trim43bP86448 AC192616.1-201ENSMUST00000221922 132 ntBASIC1.39□□□□□ -2.19
Trim43bP86448 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC1.39□□□□□ -2.19
Trim43bP86448 Mir465c-1-201ENSMUST00000093560 81 ntBASIC1.39□□□□□ -2.19
Trim43bP86448 Gm23422-201ENSMUST00000102000 107 ntBASIC1.38□□□□□ -2.19
Trim43bP86448 n-R5s202-201ENSMUST00000104517 114 ntBASIC1.38□□□□□ -2.19
Trim43bP86448 Gm7916-201ENSMUST00000120325 456 ntBASIC1.38□□□□□ -2.19
Trim43bP86448 Gm13409-201ENSMUST00000122072 546 ntBASIC1.38□□□□□ -2.19
Trim43bP86448 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC1.38□□□□□ -2.19
Trim43bP86448 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
Trim43bP86448 Gm23122-201ENSMUST00000157645 103 ntBASIC1.38□□□□□ -2.19
Trim43bP86448 Gm25933-201ENSMUST00000178943 108 ntBASIC1.38□□□□□ -2.19
Trim43bP86448 Gm28151-201ENSMUST00000189404 951 ntBASIC1.38□□□□□ -2.19
Trim43bP86448 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
Trim43bP86448 Gm28404-201ENSMUST00000190242 453 ntBASIC1.38□□□□□ -2.19
Trim43bP86448 Gm37727-201ENSMUST00000191637 819 ntBASIC1.38□□□□□ -2.19
Trim43bP86448 Gm37709-201ENSMUST00000195074 600 ntBASIC1.38□□□□□ -2.19
Trim43bP86448 Gm44011-201ENSMUST00000203336 394 ntBASIC1.38□□□□□ -2.19
Trim43bP86448 Gm44830-201ENSMUST00000207667 584 ntBASIC1.38□□□□□ -2.19
Trim43bP86448 Gm44666-201ENSMUST00000208544 391 ntBASIC1.38□□□□□ -2.19
Trim43bP86448 AC116589.7-201ENSMUST00000221061 239 ntBASIC1.38□□□□□ -2.19
Trim43bP86448 AC164117.1-201ENSMUST00000221726 239 ntBASIC1.38□□□□□ -2.19
Trim43bP86448 CT033785.1-201ENSMUST00000224872 272 ntBASIC1.38□□□□□ -2.19
Trim43bP86448 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
Trim43bP86448 Mir29b-2-201ENSMUST00000083478 81 ntBASIC1.38□□□□□ -2.19
Trim43bP86448 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC1.37□□□□□ -2.19
Trim43bP86448 Mir653-201ENSMUST00000102402 85 ntBASIC1.37□□□□□ -2.19
Trim43bP86448 Gm8858-201ENSMUST00000118259 342 ntBASIC1.37□□□□□ -2.19
Trim43bP86448 Gm13804-201ENSMUST00000119552 172 ntBASIC1.37□□□□□ -2.19
Trim43bP86448 Gm12309-201ENSMUST00000119889 182 ntBASIC1.37□□□□□ -2.19
Trim43bP86448 Gm11407-201ENSMUST00000120362 1058 ntBASIC1.37□□□□□ -2.19
Trim43bP86448 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC1.37□□□□□ -2.19
Trim43bP86448 Gm26049-201ENSMUST00000157313 108 ntBASIC1.37□□□□□ -2.19
Trim43bP86448 Gm24333-201ENSMUST00000175101 84 ntBASIC1.37□□□□□ -2.19
Trim43bP86448 Gm22800-201ENSMUST00000175627 94 ntBASIC1.37□□□□□ -2.19
Trim43bP86448 Gm24388-201ENSMUST00000177872 107 ntBASIC1.37□□□□□ -2.19
Trim43bP86448 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
Trim43bP86448 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
Trim43bP86448 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC1.37□□□□□ -2.19
Trim43bP86448 Gm29950-201ENSMUST00000195273 237 ntBASIC1.37□□□□□ -2.19
Trim43bP86448 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.37□□□□□ -2.19
Trim43bP86448 Gm46993-201ENSMUST00000220708 259 ntBASIC1.37□□□□□ -2.19
Trim43bP86448 Gm26228-201ENSMUST00000082512 107 ntBASIC1.37□□□□□ -2.19
Trim43bP86448 Gm25080-201ENSMUST00000082526 107 ntBASIC1.37□□□□□ -2.19
Trim43bP86448 Gm22572-201ENSMUST00000082985 105 ntBASIC1.37□□□□□ -2.19
Trim43bP86448 Gm26175-201ENSMUST00000083794 131 ntBASIC1.37□□□□□ -2.19
Trim43bP86448 Gm25518-201ENSMUST00000083864 107 ntBASIC1.37□□□□□ -2.19
Trim43bP86448 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC1.37□□□□□ -2.19
Trim43bP86448 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC1.36□□□□□ -2.19
Trim43bP86448 Gm26384-201ENSMUST00000102183 110 ntBASIC1.36□□□□□ -2.19
Trim43bP86448 Gm24889-201ENSMUST00000104388 132 ntBASIC1.36□□□□□ -2.19
Trim43bP86448 Gm12806-201ENSMUST00000119384 268 ntBASIC1.36□□□□□ -2.19
Trim43bP86448 Gm20689-201ENSMUST00000176033 279 ntBASIC1.36□□□□□ -2.19
Trim43bP86448 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.36□□□□□ -2.19
Trim43bP86448 Ighv12-1-201ENSMUST00000195542 329 ntBASIC1.36□□□□□ -2.19
Trim43bP86448 Gm43583-201ENSMUST00000199235 303 ntBASIC1.36□□□□□ -2.19
Trim43bP86448 Gm43513-201ENSMUST00000199779 1076 ntBASIC1.36□□□□□ -2.19
Trim43bP86448 Gm44128-201ENSMUST00000204909 219 ntBASIC1.36□□□□□ -2.19
Trim43bP86448 AC116726.2-201ENSMUST00000217629 986 ntBASIC1.36□□□□□ -2.19
Trim43bP86448 Gm25853-201ENSMUST00000082793 132 ntBASIC1.36□□□□□ -2.19
Trim43bP86448 Gm23100-201ENSMUST00000083455 141 ntBASIC1.36□□□□□ -2.19
Trim43bP86448 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC1.36□□□□□ -2.19
Trim43bP86448 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
Trim43bP86448 Mir450-2-201ENSMUST00000102444 69 ntBASIC1.35□□□□□ -2.19
Trim43bP86448 Gm12779-201ENSMUST00000121496 143 ntBASIC1.35□□□□□ -2.19
Trim43bP86448 Gm14402-201ENSMUST00000122217 508 ntBASIC1.35□□□□□ -2.19
Trim43bP86448 Gm22944-201ENSMUST00000158662 133 ntBASIC1.35□□□□□ -2.19
Trim43bP86448 Mir6341-201ENSMUST00000183490 121 ntBASIC1.35□□□□□ -2.19
Trim43bP86448 Gm29640-201ENSMUST00000187972 278 ntBASIC1.35□□□□□ -2.19
Trim43bP86448 Gm29591-201ENSMUST00000188215 357 ntTSL 5 BASIC1.35□□□□□ -2.19
Trim43bP86448 Gm44308-201ENSMUST00000197080 99 ntBASIC1.35□□□□□ -2.19
Trim43bP86448 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
Trim43bP86448 Gm42857-201ENSMUST00000200823 339 ntBASIC1.35□□□□□ -2.19
Trim43bP86448 CT025689.4-201ENSMUST00000225926 601 ntBASIC1.35□□□□□ -2.19
Trim43bP86448 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC1.35□□□□□ -2.19
Trim43bP86448 Gm14390-201ENSMUST00000117505 1695 ntBASIC1.35□□□□□ -2.19
Trim43bP86448 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.34□□□□□ -2.19
Trim43bP86448 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.34□□□□□ -2.19
Trim43bP86448 Gm24865-201ENSMUST00000103246 96 ntBASIC1.34□□□□□ -2.19
Trim43bP86448 Gm23907-201ENSMUST00000104595 189 ntBASIC1.34□□□□□ -2.19
Trim43bP86448 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.34□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms