Protein–RNA interactions for Protein: P70362

Ufd1, Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1P70362 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC1.69□□□□□ -2.14
Ufd1P70362 Gm20660-201ENSMUST00000177515 289 ntBASIC1.69□□□□□ -2.14
Ufd1P70362 Gm22308-201ENSMUST00000177609 107 ntBASIC1.69□□□□□ -2.14
Ufd1P70362 Gm21827-201ENSMUST00000178247 423 ntBASIC1.69□□□□□ -2.14
Ufd1P70362 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
Ufd1P70362 Gm27511-201ENSMUST00000183502 127 ntBASIC1.69□□□□□ -2.14
Ufd1P70362 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC1.69□□□□□ -2.14
Ufd1P70362 AC124537.1-201ENSMUST00000222890 159 ntBASIC1.69□□□□□ -2.14
Ufd1P70362 AC164297.3-201ENSMUST00000224238 94 ntBASIC1.69□□□□□ -2.14
Ufd1P70362 AC162857.1-201ENSMUST00000226614 400 ntBASIC1.69□□□□□ -2.14
Ufd1P70362 Gm22978-201ENSMUST00000082607 160 ntBASIC1.69□□□□□ -2.14
Ufd1P70362 Gm22997-201ENSMUST00000082845 107 ntBASIC1.69□□□□□ -2.14
Ufd1P70362 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Ufd1P70362 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Ufd1P70362 Olfr719-ps-201ENSMUST00000137795 252 ntBASIC1.68□□□□□ -2.14
Ufd1P70362 Gm22603-201ENSMUST00000157603 96 ntBASIC1.68□□□□□ -2.14
Ufd1P70362 Gm24551-201ENSMUST00000158645 92 ntBASIC1.68□□□□□ -2.14
Ufd1P70362 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
Ufd1P70362 Mir3965-201ENSMUST00000175570 69 ntBASIC1.68□□□□□ -2.14
Ufd1P70362 Gm44337-201ENSMUST00000196553 114 ntBASIC1.68□□□□□ -2.14
Ufd1P70362 Gm44482-201ENSMUST00000199232 103 ntBASIC1.68□□□□□ -2.14
Ufd1P70362 Gm43583-201ENSMUST00000199235 303 ntBASIC1.68□□□□□ -2.14
Ufd1P70362 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC1.68□□□□□ -2.14
Ufd1P70362 CT025526.1-201ENSMUST00000217327 267 ntBASIC1.68□□□□□ -2.14
Ufd1P70362 AC121942.2-201ENSMUST00000223824 600 ntBASIC1.68□□□□□ -2.14
Ufd1P70362 AC129085.5-201ENSMUST00000225468 400 ntBASIC1.68□□□□□ -2.14
Ufd1P70362 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
Ufd1P70362 Gm25589-201ENSMUST00000082502 166 ntBASIC1.68□□□□□ -2.14
Ufd1P70362 Gm26066-201ENSMUST00000083385 109 ntBASIC1.68□□□□□ -2.14
Ufd1P70362 Mir128-1-201ENSMUST00000083586 70 ntBASIC1.68□□□□□ -2.14
Ufd1P70362 Gm25896-201ENSMUST00000083713 136 ntBASIC1.68□□□□□ -2.14
Ufd1P70362 Gm26175-201ENSMUST00000083794 131 ntBASIC1.68□□□□□ -2.14
Ufd1P70362 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC1.68□□□□□ -2.14
Ufd1P70362 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
Ufd1P70362 Gm37661-201ENSMUST00000191863 1550 ntBASIC1.68□□□□□ -2.14
Ufd1P70362 Gm23472-201ENSMUST00000101806 191 ntBASIC1.67□□□□□ -2.14
Ufd1P70362 Gm25773-201ENSMUST00000116718 127 ntBASIC1.67□□□□□ -2.14
Ufd1P70362 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC1.67□□□□□ -2.14
Ufd1P70362 Gm13475-201ENSMUST00000119290 234 ntBASIC1.67□□□□□ -2.14
Ufd1P70362 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC1.67□□□□□ -2.14
Ufd1P70362 Gm25059-201ENSMUST00000157367 117 ntBASIC1.67□□□□□ -2.14
Ufd1P70362 Gm24480-201ENSMUST00000157442 103 ntBASIC1.67□□□□□ -2.14
Ufd1P70362 Gm25224-201ENSMUST00000158195 68 ntBASIC1.67□□□□□ -2.14
Ufd1P70362 Gm24497-201ENSMUST00000177868 191 ntBASIC1.67□□□□□ -2.14
Ufd1P70362 Gm25939-201ENSMUST00000179876 191 ntBASIC1.67□□□□□ -2.14
Ufd1P70362 Gm37377-201ENSMUST00000191733 304 ntBASIC1.67□□□□□ -2.14
Ufd1P70362 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC1.67□□□□□ -2.14
Ufd1P70362 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC1.67□□□□□ -2.14
Ufd1P70362 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC1.67□□□□□ -2.14
Ufd1P70362 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC1.67□□□□□ -2.14
Ufd1P70362 AC154552.7-201ENSMUST00000222824 156 ntBASIC1.67□□□□□ -2.14
Ufd1P70362 Gm23614-201ENSMUST00000082598 107 ntBASIC1.67□□□□□ -2.14
Ufd1P70362 Gm23444-201ENSMUST00000082922 191 ntBASIC1.67□□□□□ -2.14
Ufd1P70362 Gm24412-201ENSMUST00000083426 109 ntBASIC1.67□□□□□ -2.14
Ufd1P70362 Gm25651-201ENSMUST00000083782 119 ntBASIC1.67□□□□□ -2.14
Ufd1P70362 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Ufd1P70362 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Ufd1P70362 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
Ufd1P70362 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Ufd1P70362 Gm23803-201ENSMUST00000104610 132 ntBASIC1.66□□□□□ -2.14
Ufd1P70362 Gm24403-201ENSMUST00000104616 130 ntBASIC1.66□□□□□ -2.14
Ufd1P70362 Snord98-201ENSMUST00000116819 65 ntBASIC1.66□□□□□ -2.14
Ufd1P70362 Gm14269-201ENSMUST00000120455 306 ntBASIC1.66□□□□□ -2.14
Ufd1P70362 Gm14287-201ENSMUST00000121060 117 ntBASIC1.66□□□□□ -2.14
Ufd1P70362 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
Ufd1P70362 Gm25115-201ENSMUST00000157187 140 ntBASIC1.66□□□□□ -2.14
Ufd1P70362 Gm24419-201ENSMUST00000157875 332 ntBASIC1.66□□□□□ -2.14
Ufd1P70362 Gm24958-201ENSMUST00000158009 97 ntBASIC1.66□□□□□ -2.14
Ufd1P70362 Gm22386-201ENSMUST00000158192 129 ntBASIC1.66□□□□□ -2.14
Ufd1P70362 Gm25658-201ENSMUST00000158472 128 ntBASIC1.66□□□□□ -2.14
Ufd1P70362 Gm7592-201ENSMUST00000160674 627 ntBASIC1.66□□□□□ -2.14
Ufd1P70362 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC1.66□□□□□ -2.14
Ufd1P70362 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
Ufd1P70362 Gm27544-201ENSMUST00000185069 155 ntBASIC1.66□□□□□ -2.14
Ufd1P70362 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC1.66□□□□□ -2.14
Ufd1P70362 Gm32222-201ENSMUST00000203296 298 ntBASIC1.66□□□□□ -2.14
Ufd1P70362 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC1.66□□□□□ -2.14
Ufd1P70362 AC131720.2-201ENSMUST00000220420 431 ntBASIC1.66□□□□□ -2.14
Ufd1P70362 Mir107-201ENSMUST00000083660 87 ntBASIC1.66□□□□□ -2.14
Ufd1P70362 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC1.66□□□□□ -2.14
Ufd1P70362 Mir701-201ENSMUST00000102208 109 ntBASIC1.65□□□□□ -2.15
Ufd1P70362 Gm7164-201ENSMUST00000117503 450 ntBASIC1.65□□□□□ -2.15
Ufd1P70362 Gm14845-201ENSMUST00000121259 306 ntBASIC1.65□□□□□ -2.15
Ufd1P70362 Gm24896-201ENSMUST00000122741 135 ntBASIC1.65□□□□□ -2.15
Ufd1P70362 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC1.65□□□□□ -2.15
Ufd1P70362 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC1.65□□□□□ -2.15
Ufd1P70362 Gm22316-201ENSMUST00000158012 216 ntBASIC1.65□□□□□ -2.15
Ufd1P70362 Gm22159-201ENSMUST00000158412 130 ntBASIC1.65□□□□□ -2.15
Ufd1P70362 Gm25051-201ENSMUST00000158602 249 ntBASIC1.65□□□□□ -2.15
Ufd1P70362 Gm25748-201ENSMUST00000175487 70 ntBASIC1.65□□□□□ -2.15
Ufd1P70362 Gm25121-201ENSMUST00000179846 79 ntBASIC1.65□□□□□ -2.15
Ufd1P70362 Gm27979-201ENSMUST00000185126 56 ntBASIC1.65□□□□□ -2.15
Ufd1P70362 Gm44128-201ENSMUST00000204909 219 ntBASIC1.65□□□□□ -2.15
Ufd1P70362 Gm45403-201ENSMUST00000209453 276 ntBASIC1.65□□□□□ -2.15
Ufd1P70362 AC126267.1-201ENSMUST00000214282 284 ntBASIC1.65□□□□□ -2.15
Ufd1P70362 AC120540.2-201ENSMUST00000221716 387 ntBASIC1.65□□□□□ -2.15
Ufd1P70362 AC130821.1-201ENSMUST00000221997 293 ntBASIC1.65□□□□□ -2.15
Ufd1P70362 AC117202.2-201ENSMUST00000226491 1101 ntBASIC1.65□□□□□ -2.15
Ufd1P70362 Gm22249-201ENSMUST00000082485 136 ntBASIC1.65□□□□□ -2.15
Ufd1P70362 Gm24037-201ENSMUST00000082871 180 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms