Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Gm10357-201ENSMUST00000159886 264 ntBASIC3.19□□□□□ -1.9
Sf3b6P59708 Gm17020-201ENSMUST00000172274 274 ntBASIC3.19□□□□□ -1.9
Sf3b6P59708 Vmn2r-ps58-201ENSMUST00000173044 242 ntBASIC3.19□□□□□ -1.9
Sf3b6P59708 Gm25020-201ENSMUST00000178071 107 ntBASIC3.19□□□□□ -1.9
Sf3b6P59708 Gm27793-201ENSMUST00000183405 76 ntBASIC3.19□□□□□ -1.9
Sf3b6P59708 Mir6975-201ENSMUST00000184879 61 ntBASIC3.19□□□□□ -1.9
Sf3b6P59708 Gm19774-201ENSMUST00000190667 114 ntBASIC3.19□□□□□ -1.9
Sf3b6P59708 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC3.19□□□□□ -1.9
Sf3b6P59708 Gm43901-201ENSMUST00000203247 453 ntBASIC3.19□□□□□ -1.9
Sf3b6P59708 Gm44459-201ENSMUST00000203926 160 ntBASIC3.19□□□□□ -1.9
Sf3b6P59708 Gm44294-201ENSMUST00000205090 728 ntBASIC3.19□□□□□ -1.9
Sf3b6P59708 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC3.19□□□□□ -1.9
Sf3b6P59708 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Sf3b6P59708 Gm18617-201ENSMUST00000222311 259 ntBASIC3.19□□□□□ -1.9
Sf3b6P59708 AC140344.1-201ENSMUST00000223384 387 ntBASIC3.19□□□□□ -1.9
Sf3b6P59708 AC124562.1-201ENSMUST00000224673 337 ntBASIC3.19□□□□□ -1.9
Sf3b6P59708 AC027184.1-201ENSMUST00000226991 424 ntBASIC3.19□□□□□ -1.9
Sf3b6P59708 Gm22299-201ENSMUST00000082663 136 ntBASIC3.19□□□□□ -1.9
Sf3b6P59708 Gm24453-201ENSMUST00000083346 76 ntBASIC3.19□□□□□ -1.9
Sf3b6P59708 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Sf3b6P59708 Gm43883-201ENSMUST00000204002 3750 ntBASIC3.19□□□□□ -1.9
Sf3b6P59708 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Sf3b6P59708 AC117199.1-201ENSMUST00000219940 3132 ntBASIC3.19□□□□□ -1.9
Sf3b6P59708 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Sf3b6P59708 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Sf3b6P59708 Themis-201ENSMUST00000056097 5082 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
Sf3b6P59708 Gm45884-201ENSMUST00000209540 3416 ntBASIC3.18□□□□□ -1.9
Sf3b6P59708 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
Sf3b6P59708 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Sf3b6P59708 Gm15365-201ENSMUST00000122392 300 ntBASIC3.18□□□□□ -1.9
Sf3b6P59708 Gm26482-201ENSMUST00000158015 62 ntBASIC3.18□□□□□ -1.9
Sf3b6P59708 Gm25436-201ENSMUST00000158275 145 ntBASIC3.18□□□□□ -1.9
Sf3b6P59708 Gm24131-201ENSMUST00000158539 107 ntBASIC3.18□□□□□ -1.9
Sf3b6P59708 Gm23112-201ENSMUST00000158606 125 ntBASIC3.18□□□□□ -1.9
Sf3b6P59708 Gm23152-201ENSMUST00000175322 116 ntBASIC3.18□□□□□ -1.9
Sf3b6P59708 Mir6914-201ENSMUST00000184999 69 ntBASIC3.18□□□□□ -1.9
Sf3b6P59708 Gm37001-201ENSMUST00000193377 190 ntBASIC3.18□□□□□ -1.9
Sf3b6P59708 Gm42834-201ENSMUST00000196845 256 ntBASIC3.18□□□□□ -1.9
Sf3b6P59708 Mir721-201ENSMUST00000200230 88 ntBASIC3.18□□□□□ -1.9
Sf3b6P59708 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC3.18□□□□□ -1.9
Sf3b6P59708 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
Sf3b6P59708 Vmn1r178-202ENSMUST00000226450 2880 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Sf3b6P59708 Gm43875-201ENSMUST00000203319 2475 ntBASIC3.17□□□□□ -1.9
Sf3b6P59708 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Sf3b6P59708 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Sf3b6P59708 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
Sf3b6P59708 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Sf3b6P59708 Gm45540-201ENSMUST00000209271 3606 ntBASIC3.17□□□□□ -1.9
Sf3b6P59708 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC3.17□□□□□ -1.9
Sf3b6P59708 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Sf3b6P59708 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Sf3b6P59708 Gm11356-201ENSMUST00000118974 192 ntBASIC3.17□□□□□ -1.9
Sf3b6P59708 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC3.17□□□□□ -1.9
Sf3b6P59708 Gm16005-201ENSMUST00000120515 269 ntBASIC3.17□□□□□ -1.9
Sf3b6P59708 Mup-ps20-201ENSMUST00000121132 389 ntBASIC3.17□□□□□ -1.9
Sf3b6P59708 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.17□□□□□ -1.9
Sf3b6P59708 Gm22889-201ENSMUST00000158639 58 ntBASIC3.17□□□□□ -1.9
Sf3b6P59708 Mir1936-201ENSMUST00000158699 93 ntBASIC3.17□□□□□ -1.9
Sf3b6P59708 Gm28992-201ENSMUST00000190534 139 ntBASIC3.17□□□□□ -1.9
Sf3b6P59708 Mir129b-201ENSMUST00000197461 65 ntBASIC3.17□□□□□ -1.9
Sf3b6P59708 AC154282.1-201ENSMUST00000223154 265 ntBASIC3.17□□□□□ -1.9
Sf3b6P59708 Gm6030-201ENSMUST00000078768 402 ntBASIC3.17□□□□□ -1.9
Sf3b6P59708 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC3.17□□□□□ -1.9
Sf3b6P59708 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Sf3b6P59708 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
Sf3b6P59708 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Sf3b6P59708 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
Sf3b6P59708 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Sf3b6P59708 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Sf3b6P59708 Gm12897-201ENSMUST00000120341 250 ntBASIC3.16□□□□□ -1.9
Sf3b6P59708 Gm12926-201ENSMUST00000121158 409 ntBASIC3.16□□□□□ -1.9
Sf3b6P59708 Gm25059-201ENSMUST00000157367 117 ntBASIC3.16□□□□□ -1.9
Sf3b6P59708 Gm26148-201ENSMUST00000157430 68 ntBASIC3.16□□□□□ -1.9
Sf3b6P59708 Gm22501-201ENSMUST00000158981 127 ntBASIC3.16□□□□□ -1.9
Sf3b6P59708 Gm22800-201ENSMUST00000175627 94 ntBASIC3.16□□□□□ -1.9
Sf3b6P59708 Mir5710-201ENSMUST00000176884 69 ntBASIC3.16□□□□□ -1.9
Sf3b6P59708 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC3.16□□□□□ -1.9
Sf3b6P59708 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Sf3b6P59708 Gm37918-201ENSMUST00000192071 120 ntBASIC3.16□□□□□ -1.9
Sf3b6P59708 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC3.16□□□□□ -1.9
Sf3b6P59708 Snord80-202ENSMUST00000199023 77 ntBASIC3.16□□□□□ -1.9
Sf3b6P59708 Gm45796-201ENSMUST00000212483 114 ntBASIC3.16□□□□□ -1.9
Sf3b6P59708 CT009696.2-201ENSMUST00000216668 432 ntBASIC3.16□□□□□ -1.9
Sf3b6P59708 Gm25589-201ENSMUST00000082502 166 ntBASIC3.16□□□□□ -1.9
Sf3b6P59708 Mir132-201ENSMUST00000083603 66 ntBASIC3.16□□□□□ -1.9
Sf3b6P59708 Gm23040-201ENSMUST00000083869 163 ntBASIC3.16□□□□□ -1.9
Sf3b6P59708 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Sf3b6P59708 Olfr194-202ENSMUST00000213228 3668 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Sf3b6P59708 Gm44120-201ENSMUST00000203022 3023 ntBASIC3.16□□□□□ -1.9
Sf3b6P59708 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC3.16□□□□□ -1.9
Sf3b6P59708 Gm45039-201ENSMUST00000209181 3477 ntBASIC3.16□□□□□ -1.9
Sf3b6P59708 Gm18751-201ENSMUST00000185777 2013 ntBASIC3.15□□□□□ -1.9
Sf3b6P59708 Gm37777-201ENSMUST00000195546 3366 ntBASIC3.15□□□□□ -1.9
Sf3b6P59708 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Sf3b6P59708 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
Sf3b6P59708 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
Sf3b6P59708 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Sf3b6P59708 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
Sf3b6P59708 Gm22658-201ENSMUST00000104196 155 ntBASIC3.15□□□□□ -1.91
Sf3b6P59708 Gm25985-201ENSMUST00000122677 107 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 90.9 ms