Protein–RNA interactions for Protein: P59114

Pcif1, Phosphorylated CTD-interacting factor 1, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1P59114 Gm24911-201ENSMUST00000157292 136 ntBASIC2.84□□□□□ -1.95
Pcif1P59114 Gm22598-201ENSMUST00000157600 127 ntBASIC2.84□□□□□ -1.95
Pcif1P59114 Gm22192-201ENSMUST00000175128 85 ntBASIC2.84□□□□□ -1.95
Pcif1P59114 Gm37037-201ENSMUST00000194475 424 ntBASIC2.84□□□□□ -1.95
Pcif1P59114 Gm44425-201ENSMUST00000203739 429 ntBASIC2.84□□□□□ -1.95
Pcif1P59114 Gm44960-201ENSMUST00000207403 141 ntBASIC2.84□□□□□ -1.95
Pcif1P59114 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC2.84□□□□□ -1.95
Pcif1P59114 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC2.84□□□□□ -1.95
Pcif1P59114 CT030166.2-201ENSMUST00000222021 368 ntBASIC2.84□□□□□ -1.95
Pcif1P59114 AC163295.1-201ENSMUST00000227840 314 ntBASIC2.84□□□□□ -1.95
Pcif1P59114 Gm10088-201ENSMUST00000074116 423 ntBASIC2.84□□□□□ -1.95
Pcif1P59114 Gm25632-201ENSMUST00000083112 85 ntBASIC2.84□□□□□ -1.95
Pcif1P59114 Gm26494-201ENSMUST00000083154 143 ntBASIC2.84□□□□□ -1.95
Pcif1P59114 Gm24493-201ENSMUST00000083805 143 ntBASIC2.84□□□□□ -1.95
Pcif1P59114 Gm23851-201ENSMUST00000083831 103 ntBASIC2.84□□□□□ -1.95
Pcif1P59114 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.84□□□□□ -1.96
Pcif1P59114 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
Pcif1P59114 CT030170.3-201ENSMUST00000221205 1815 ntBASIC2.84□□□□□ -1.96
Pcif1P59114 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.83□□□□□ -1.96
Pcif1P59114 Gm26500-201ENSMUST00000101867 106 ntBASIC2.83□□□□□ -1.96
Pcif1P59114 Mir1195-201ENSMUST00000116818 98 ntBASIC2.83□□□□□ -1.96
Pcif1P59114 Gm12550-201ENSMUST00000118478 329 ntBASIC2.83□□□□□ -1.96
Pcif1P59114 Gm14843-201ENSMUST00000119596 212 ntBASIC2.83□□□□□ -1.96
Pcif1P59114 Defa-ps8-201ENSMUST00000120972 279 ntBASIC2.83□□□□□ -1.96
Pcif1P59114 Gm23600-201ENSMUST00000157260 71 ntBASIC2.83□□□□□ -1.96
Pcif1P59114 Mir6355-201ENSMUST00000183687 106 ntBASIC2.83□□□□□ -1.96
Pcif1P59114 Gm27761-201ENSMUST00000184091 131 ntBASIC2.83□□□□□ -1.96
Pcif1P59114 Gm28647-201ENSMUST00000188416 197 ntBASIC2.83□□□□□ -1.96
Pcif1P59114 Gm32817-202ENSMUST00000210738 527 ntTSL 2 BASIC2.83□□□□□ -1.96
Pcif1P59114 AC133156.1-202ENSMUST00000227284 363 ntBASIC2.83□□□□□ -1.96
Pcif1P59114 Gm23378-201ENSMUST00000082942 107 ntBASIC2.83□□□□□ -1.96
Pcif1P59114 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Pcif1P59114 Gm14770-201ENSMUST00000122197 312 ntBASIC2.82□□□□□ -1.96
Pcif1P59114 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
Pcif1P59114 Gm22945-201ENSMUST00000158557 157 ntBASIC2.82□□□□□ -1.96
Pcif1P59114 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Pcif1P59114 Mir5624-201ENSMUST00000176635 61 ntBASIC2.82□□□□□ -1.96
Pcif1P59114 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
Pcif1P59114 AC155839.1-201ENSMUST00000200105 147 ntBASIC2.82□□□□□ -1.96
Pcif1P59114 Gm45207-201ENSMUST00000207469 145 ntBASIC2.82□□□□□ -1.96
Pcif1P59114 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Pcif1P59114 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
Pcif1P59114 Gm23040-201ENSMUST00000083869 163 ntBASIC2.82□□□□□ -1.96
Pcif1P59114 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.82□□□□□ -1.96
Pcif1P59114 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.81□□□□□ -1.96
Pcif1P59114 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.81□□□□□ -1.96
Pcif1P59114 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Pcif1P59114 Gm8260-201ENSMUST00000119230 353 ntBASIC2.81□□□□□ -1.96
Pcif1P59114 Gm12042-201ENSMUST00000120479 301 ntBASIC2.81□□□□□ -1.96
Pcif1P59114 Gm15379-201ENSMUST00000121224 648 ntBASIC2.81□□□□□ -1.96
Pcif1P59114 Gm11712-201ENSMUST00000129139 367 ntTSL 5 BASIC2.81□□□□□ -1.96
Pcif1P59114 Gm14298-201ENSMUST00000139032 237 ntBASIC2.81□□□□□ -1.96
Pcif1P59114 Gm16356-201ENSMUST00000143300 169 ntBASIC2.81□□□□□ -1.96
Pcif1P59114 Gm24618-201ENSMUST00000177718 94 ntBASIC2.81□□□□□ -1.96
Pcif1P59114 Gm23953-201ENSMUST00000178214 94 ntBASIC2.81□□□□□ -1.96
Pcif1P59114 Gm26332-201ENSMUST00000179813 94 ntBASIC2.81□□□□□ -1.96
Pcif1P59114 Gm22863-201ENSMUST00000180265 94 ntBASIC2.81□□□□□ -1.96
Pcif1P59114 Gm28995-201ENSMUST00000186625 261 ntBASIC2.81□□□□□ -1.96
Pcif1P59114 Igkv4-60-201ENSMUST00000200639 358 ntBASIC2.81□□□□□ -1.96
Pcif1P59114 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC2.81□□□□□ -1.96
Pcif1P59114 Gm43600-201ENSMUST00000202134 223 ntBASIC2.81□□□□□ -1.96
Pcif1P59114 Gm44010-201ENSMUST00000204432 331 ntBASIC2.81□□□□□ -1.96
Pcif1P59114 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC2.81□□□□□ -1.96
Pcif1P59114 Olfr1009-201ENSMUST00000055517 945 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Pcif1P59114 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.81□□□□□ -1.96
Pcif1P59114 Gm26329-201ENSMUST00000093723 110 ntBASIC2.81□□□□□ -1.96
Pcif1P59114 AC153526.2-201ENSMUST00000218206 2031 ntBASIC2.81□□□□□ -1.96
Pcif1P59114 CT009504.1-201ENSMUST00000218252 3330 ntBASIC2.81□□□□□ -1.96
Pcif1P59114 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.81□□□□□ -1.96
Pcif1P59114 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Pcif1P59114 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Pcif1P59114 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.8□□□□□ -1.96
Pcif1P59114 Gm12304-201ENSMUST00000120312 385 ntBASIC2.8□□□□□ -1.96
Pcif1P59114 Gm24726-201ENSMUST00000158232 121 ntBASIC2.8□□□□□ -1.96
Pcif1P59114 Gm22500-201ENSMUST00000158982 99 ntBASIC2.8□□□□□ -1.96
Pcif1P59114 Gm25476-201ENSMUST00000175125 185 ntBASIC2.8□□□□□ -1.96
Pcif1P59114 Gm24816-201ENSMUST00000175311 151 ntBASIC2.8□□□□□ -1.96
Pcif1P59114 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC2.8□□□□□ -1.96
Pcif1P59114 Gm9318-201ENSMUST00000222444 438 ntBASIC2.8□□□□□ -1.96
Pcif1P59114 Gm22685-201ENSMUST00000082848 106 ntBASIC2.8□□□□□ -1.96
Pcif1P59114 Gm23731-201ENSMUST00000083749 107 ntBASIC2.8□□□□□ -1.96
Pcif1P59114 Gm44230-201ENSMUST00000203032 3550 ntBASIC2.8□□□□□ -1.96
Pcif1P59114 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Pcif1P59114 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Pcif1P59114 Gm22752-201ENSMUST00000102083 109 ntBASIC2.79□□□□□ -1.96
Pcif1P59114 Gm22782-201ENSMUST00000104082 132 ntBASIC2.79□□□□□ -1.96
Pcif1P59114 Gm15010-201ENSMUST00000117153 407 ntBASIC2.79□□□□□ -1.96
Pcif1P59114 Gm14602-201ENSMUST00000118625 340 ntBASIC2.79□□□□□ -1.96
Pcif1P59114 Gm13729-201ENSMUST00000120328 406 ntBASIC2.79□□□□□ -1.96
Pcif1P59114 Gm11606-201ENSMUST00000120706 617 ntBASIC2.79□□□□□ -1.96
Pcif1P59114 Gm12924-201ENSMUST00000121747 318 ntBASIC2.79□□□□□ -1.96
Pcif1P59114 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC2.79□□□□□ -1.96
Pcif1P59114 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Pcif1P59114 Ear-ps8-201ENSMUST00000161935 354 ntBASIC2.79□□□□□ -1.96
Pcif1P59114 Gm17065-201ENSMUST00000165245 239 ntBASIC2.79□□□□□ -1.96
Pcif1P59114 Gm25956-201ENSMUST00000175115 217 ntBASIC2.79□□□□□ -1.96
Pcif1P59114 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC2.79□□□□□ -1.96
Pcif1P59114 AC151833.1-201ENSMUST00000227752 574 ntBASIC2.79□□□□□ -1.96
Pcif1P59114 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Pcif1P59114 Gm24460-201ENSMUST00000082731 106 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms