Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Gm29460-201ENSMUST00000188607 714 ntBASIC0.82□□□□□ -2.28
Cux1P53564 Gm20559-206ENSMUST00000202696 358 ntTSL 5 BASIC0.82□□□□□ -2.28
Cux1P53564 Gm35736-201ENSMUST00000203681 313 ntBASIC0.82□□□□□ -2.28
Cux1P53564 Gm44088-201ENSMUST00000204595 237 ntBASIC0.82□□□□□ -2.28
Cux1P53564 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.82□□□□□ -2.28
Cux1P53564 AC126939.3-201ENSMUST00000226061 166 ntBASIC0.82□□□□□ -2.28
Cux1P53564 AC151902.1-201ENSMUST00000227800 375 ntBASIC0.82□□□□□ -2.28
Cux1P53564 Gm10092-201ENSMUST00000077110 180 ntBASIC0.82□□□□□ -2.28
Cux1P53564 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC0.81□□□□□ -2.28
Cux1P53564 Gm24431-201ENSMUST00000104073 66 ntBASIC0.81□□□□□ -2.28
Cux1P53564 Gm14358-201ENSMUST00000118458 403 ntBASIC0.81□□□□□ -2.28
Cux1P53564 Gm29288-201ENSMUST00000191582 901 ntBASIC0.81□□□□□ -2.28
Cux1P53564 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC0.81□□□□□ -2.28
Cux1P53564 Gm45366-201ENSMUST00000209828 384 ntBASIC0.81□□□□□ -2.28
Cux1P53564 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC0.81□□□□□ -2.28
Cux1P53564 AC154552.5-201ENSMUST00000222352 207 ntBASIC0.81□□□□□ -2.28
Cux1P53564 CT030166.3-201ENSMUST00000223203 193 ntBASIC0.81□□□□□ -2.28
Cux1P53564 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.81□□□□□ -2.28
Cux1P53564 Mir92-2-201ENSMUST00000083679 91 ntBASIC0.81□□□□□ -2.28
Cux1P53564 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC0.81□□□□□ -2.28
Cux1P53564 Gm6272-201ENSMUST00000121256 171 ntBASIC0.8□□□□□ -2.28
Cux1P53564 Gm23672-201ENSMUST00000157471 107 ntBASIC0.8□□□□□ -2.28
Cux1P53564 Gm22074-201ENSMUST00000158595 113 ntBASIC0.8□□□□□ -2.28
Cux1P53564 Gm20415-201ENSMUST00000172877 423 ntBASIC0.8□□□□□ -2.28
Cux1P53564 Gm21978-201ENSMUST00000179696 377 ntBASIC0.8□□□□□ -2.28
Cux1P53564 Gm27861-201ENSMUST00000183920 214 ntBASIC0.8□□□□□ -2.28
Cux1P53564 Gm43245-201ENSMUST00000197603 468 ntBASIC0.8□□□□□ -2.28
Cux1P53564 Mir3068-202ENSMUST00000197755 79 ntBASIC0.8□□□□□ -2.28
Cux1P53564 Gm44324-201ENSMUST00000198517 135 ntBASIC0.8□□□□□ -2.28
Cux1P53564 Gm43944-201ENSMUST00000205220 120 ntBASIC0.8□□□□□ -2.28
Cux1P53564 Gm29754-201ENSMUST00000206269 358 ntBASIC0.8□□□□□ -2.28
Cux1P53564 Gm45387-201ENSMUST00000209792 632 ntBASIC0.8□□□□□ -2.28
Cux1P53564 AC133654.1-201ENSMUST00000228411 672 ntBASIC0.8□□□□□ -2.28
Cux1P53564 Gm22302-201ENSMUST00000082657 106 ntBASIC0.8□□□□□ -2.28
Cux1P53564 Gm14039-201ENSMUST00000118705 101 ntBASIC0.79□□□□□ -2.28
Cux1P53564 Gm12044-201ENSMUST00000120335 213 ntBASIC0.79□□□□□ -2.28
Cux1P53564 Gm16359-201ENSMUST00000124511 289 ntBASIC0.79□□□□□ -2.28
Cux1P53564 Gm24476-201ENSMUST00000157437 131 ntBASIC0.79□□□□□ -2.28
Cux1P53564 Gm3025-201ENSMUST00000163454 489 ntBASIC0.79□□□□□ -2.28
Cux1P53564 Gm3111-201ENSMUST00000167426 490 ntBASIC0.79□□□□□ -2.28
Cux1P53564 Gm24573-201ENSMUST00000175499 112 ntBASIC0.79□□□□□ -2.28
Cux1P53564 Gm37102-201ENSMUST00000195740 1105 ntBASIC0.79□□□□□ -2.28
Cux1P53564 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC0.79□□□□□ -2.28
Cux1P53564 CT025689.3-201ENSMUST00000223817 301 ntBASIC0.79□□□□□ -2.28
Cux1P53564 AL645546.2-201ENSMUST00000224526 265 ntBASIC0.79□□□□□ -2.28
Cux1P53564 AC147633.1-201ENSMUST00000225134 259 ntBASIC0.79□□□□□ -2.28
Cux1P53564 Gm24152-201ENSMUST00000082764 163 ntBASIC0.79□□□□□ -2.28
Cux1P53564 Gm26328-201ENSMUST00000082821 107 ntBASIC0.79□□□□□ -2.28
Cux1P53564 Gm25794-201ENSMUST00000083286 107 ntBASIC0.79□□□□□ -2.28
Cux1P53564 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
Cux1P53564 Gm22678-201ENSMUST00000116974 101 ntBASIC0.79□□□□□ -2.28
Cux1P53564 Gm14554-201ENSMUST00000119548 661 ntBASIC0.79□□□□□ -2.28
Cux1P53564 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC0.79□□□□□ -2.28
Cux1P53564 Gm27980-201ENSMUST00000184094 169 ntBASIC0.79□□□□□ -2.28
Cux1P53564 Gm44301-201ENSMUST00000200362 143 ntBASIC0.79□□□□□ -2.28
Cux1P53564 AL669916.3-201ENSMUST00000213855 94 ntBASIC0.79□□□□□ -2.28
Cux1P53564 AL669916.6-201ENSMUST00000214610 94 ntBASIC0.79□□□□□ -2.28
Cux1P53564 AL669916.4-201ENSMUST00000215976 94 ntBASIC0.79□□□□□ -2.28
Cux1P53564 AL669916.1-201ENSMUST00000217640 94 ntBASIC0.79□□□□□ -2.28
Cux1P53564 Gm14852-201ENSMUST00000120065 647 ntBASIC0.78□□□□□ -2.28
Cux1P53564 Gm25115-201ENSMUST00000157187 140 ntBASIC0.78□□□□□ -2.28
Cux1P53564 Gm25012-201ENSMUST00000158396 164 ntBASIC0.78□□□□□ -2.28
Cux1P53564 Gm24773-201ENSMUST00000158513 99 ntBASIC0.78□□□□□ -2.28
Cux1P53564 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC0.78□□□□□ -2.28
Cux1P53564 Gm27974-201ENSMUST00000183415 105 ntBASIC0.78□□□□□ -2.28
Cux1P53564 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC0.78□□□□□ -2.28
Cux1P53564 Gm43583-201ENSMUST00000199235 303 ntBASIC0.78□□□□□ -2.28
Cux1P53564 Mir224-201ENSMUST00000083608 82 ntBASIC0.78□□□□□ -2.28
Cux1P53564 Gm12045-201ENSMUST00000122122 573 ntBASIC0.77□□□□□ -2.29
Cux1P53564 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC0.77□□□□□ -2.29
Cux1P53564 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC0.77□□□□□ -2.29
Cux1P53564 Gm38113-201ENSMUST00000193704 201 ntBASIC0.77□□□□□ -2.29
Cux1P53564 Gm38154-201ENSMUST00000195444 340 ntBASIC0.77□□□□□ -2.29
Cux1P53564 AC160863.1-201ENSMUST00000218412 317 ntBASIC0.77□□□□□ -2.29
Cux1P53564 Gm23452-201ENSMUST00000083327 107 ntBASIC0.77□□□□□ -2.29
Cux1P53564 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.77□□□□□ -2.29
Cux1P53564 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC0.76□□□□□ -2.29
Cux1P53564 Gm11606-201ENSMUST00000120706 617 ntBASIC0.76□□□□□ -2.29
Cux1P53564 Mir6419-201ENSMUST00000184784 113 ntBASIC0.76□□□□□ -2.29
Cux1P53564 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC0.76□□□□□ -2.29
Cux1P53564 Gm42647-201ENSMUST00000195939 459 ntBASIC0.76□□□□□ -2.29
Cux1P53564 4930596I21Rik-201ENSMUST00000200494 461 ntTSL 1 (best) BASIC0.76□□□□□ -2.29
Cux1P53564 Gm45101-201ENSMUST00000208327 232 ntBASIC0.76□□□□□ -2.29
Cux1P53564 Gm44910-201ENSMUST00000208451 396 ntBASIC0.76□□□□□ -2.29
Cux1P53564 Snora34-201ENSMUST00000083402 138 ntBASIC0.76□□□□□ -2.29
Cux1P53564 AC134917.1-201ENSMUST00000220517 1449 ntBASIC0.76□□□□□ -2.29
Cux1P53564 Gm14913-201ENSMUST00000120011 1093 ntBASIC0.75□□□□□ -2.29
Cux1P53564 Gm12825-201ENSMUST00000120249 563 ntBASIC0.75□□□□□ -2.29
Cux1P53564 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC0.75□□□□□ -2.29
Cux1P53564 Gm26213-201ENSMUST00000158582 110 ntBASIC0.75□□□□□ -2.29
Cux1P53564 Gm23020-201ENSMUST00000158766 253 ntBASIC0.75□□□□□ -2.29
Cux1P53564 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC0.75□□□□□ -2.29
Cux1P53564 Gm26378-201ENSMUST00000179093 107 ntBASIC0.75□□□□□ -2.29
Cux1P53564 Gm18356-201ENSMUST00000185677 623 ntBASIC0.75□□□□□ -2.29
Cux1P53564 Gm18667-201ENSMUST00000186523 484 ntBASIC0.75□□□□□ -2.29
Cux1P53564 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC0.75□□□□□ -2.29
Cux1P53564 Gm43493-201ENSMUST00000199837 202 ntBASIC0.75□□□□□ -2.29
Cux1P53564 Gm25403-201ENSMUST00000082971 143 ntBASIC0.75□□□□□ -2.29
Cux1P53564 Gm23741-201ENSMUST00000097237 171 ntBASIC0.75□□□□□ -2.29
Cux1P53564 Gm14914-201ENSMUST00000117576 2031 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 91.5 ms