Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 n-R5s219-201ENSMUST00000104328 132 ntBASIC4.02□□□□□ -1.77
Rfx1P48377 Gm11704-201ENSMUST00000120031 214 ntBASIC4.02□□□□□ -1.77
Rfx1P48377 Gm15799-201ENSMUST00000120899 289 ntBASIC4.02□□□□□ -1.77
Rfx1P48377 Gm23084-201ENSMUST00000157850 114 ntBASIC4.02□□□□□ -1.77
Rfx1P48377 Gm22538-201ENSMUST00000158169 299 ntBASIC4.02□□□□□ -1.77
Rfx1P48377 Gm22840-201ENSMUST00000158444 136 ntBASIC4.02□□□□□ -1.77
Rfx1P48377 Gm25935-201ENSMUST00000178746 107 ntBASIC4.02□□□□□ -1.77
Rfx1P48377 Gm26928-201ENSMUST00000182674 572 ntBASIC4.02□□□□□ -1.77
Rfx1P48377 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC4.02□□□□□ -1.77
Rfx1P48377 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC4.02□□□□□ -1.77
Rfx1P48377 Snord82-201ENSMUST00000082889 70 ntBASIC4.02□□□□□ -1.77
Rfx1P48377 Gm43958-201ENSMUST00000204360 3544 ntBASIC4.02□□□□□ -1.77
Rfx1P48377 AC153801.2-201ENSMUST00000219875 3372 ntBASIC4.02□□□□□ -1.77
Rfx1P48377 Gm37158-201ENSMUST00000191652 5704 ntBASIC4.02□□□□□ -1.77
Rfx1P48377 Gm15497-201ENSMUST00000119137 551 ntBASIC4.01□□□□□ -1.77
Rfx1P48377 n-R5s150-201ENSMUST00000122705 108 ntBASIC4.01□□□□□ -1.77
Rfx1P48377 Gm25625-201ENSMUST00000157221 96 ntBASIC4.01□□□□□ -1.77
Rfx1P48377 Gm23602-201ENSMUST00000157258 132 ntBASIC4.01□□□□□ -1.77
Rfx1P48377 Gm22310-201ENSMUST00000157509 116 ntBASIC4.01□□□□□ -1.77
Rfx1P48377 Gm23112-201ENSMUST00000158606 125 ntBASIC4.01□□□□□ -1.77
Rfx1P48377 Gm25457-201ENSMUST00000179509 107 ntBASIC4.01□□□□□ -1.77
Rfx1P48377 Gm27582-201ENSMUST00000184084 126 ntBASIC4.01□□□□□ -1.77
Rfx1P48377 Gm27773-201ENSMUST00000184087 78 ntBASIC4.01□□□□□ -1.77
Rfx1P48377 Gm29408-201ENSMUST00000187536 216 ntBASIC4.01□□□□□ -1.77
Rfx1P48377 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC4.01□□□□□ -1.77
Rfx1P48377 Gm19901-201ENSMUST00000192191 495 ntBASIC4.01□□□□□ -1.77
Rfx1P48377 Gm38183-201ENSMUST00000193189 205 ntBASIC4.01□□□□□ -1.77
Rfx1P48377 Gm37239-201ENSMUST00000193510 141 ntBASIC4.01□□□□□ -1.77
Rfx1P48377 AC132615.1-201ENSMUST00000213873 255 ntBASIC4.01□□□□□ -1.77
Rfx1P48377 AC123709.1-201ENSMUST00000224848 345 ntBASIC4.01□□□□□ -1.77
Rfx1P48377 Gm26204-201ENSMUST00000082906 107 ntBASIC4.01□□□□□ -1.77
Rfx1P48377 Mir323-201ENSMUST00000083683 86 ntBASIC4.01□□□□□ -1.77
Rfx1P48377 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Rfx1P48377 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Rfx1P48377 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Rfx1P48377 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
Rfx1P48377 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Rfx1P48377 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Rfx1P48377 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC4□□□□□ -1.77
Rfx1P48377 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Rfx1P48377 AC125223.3-201ENSMUST00000223588 2067 ntBASIC4□□□□□ -1.77
Rfx1P48377 Trgj3-201ENSMUST00000103562 60 ntAPPRIS P1 BASIC4□□□□□ -1.77
Rfx1P48377 Gm23578-201ENSMUST00000103943 104 ntBASIC4□□□□□ -1.77
Rfx1P48377 Gm24132-201ENSMUST00000104745 91 ntBASIC4□□□□□ -1.77
Rfx1P48377 Gm12550-201ENSMUST00000118478 329 ntBASIC4□□□□□ -1.77
Rfx1P48377 Gm24505-201ENSMUST00000157682 126 ntBASIC4□□□□□ -1.77
Rfx1P48377 Gm23666-201ENSMUST00000158053 116 ntBASIC4□□□□□ -1.77
Rfx1P48377 Ang-ps2-201ENSMUST00000178173 433 ntBASIC4□□□□□ -1.77
Rfx1P48377 Gm10292-201ENSMUST00000183142 581 ntBASIC4□□□□□ -1.77
Rfx1P48377 Gm27793-201ENSMUST00000183405 76 ntBASIC4□□□□□ -1.77
Rfx1P48377 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC4□□□□□ -1.77
Rfx1P48377 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC4□□□□□ -1.77
Rfx1P48377 Gm37997-201ENSMUST00000193515 267 ntBASIC4□□□□□ -1.77
Rfx1P48377 Gm43427-201ENSMUST00000198188 331 ntBASIC4□□□□□ -1.77
Rfx1P48377 AC153361.1-201ENSMUST00000219679 247 ntBASIC4□□□□□ -1.77
Rfx1P48377 AC140344.1-201ENSMUST00000223384 387 ntBASIC4□□□□□ -1.77
Rfx1P48377 Mir193a-201ENSMUST00000083461 66 ntBASIC4□□□□□ -1.77
Rfx1P48377 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Rfx1P48377 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.99□□□□□ -1.77
Rfx1P48377 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Rfx1P48377 Vmn1r13-204ENSMUST00000227421 5235 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Rfx1P48377 Mir767-201ENSMUST00000103256 107 ntBASIC3.99□□□□□ -1.77
Rfx1P48377 Gm15365-201ENSMUST00000122392 300 ntBASIC3.99□□□□□ -1.77
Rfx1P48377 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC3.99□□□□□ -1.77
Rfx1P48377 Gm27392-201ENSMUST00000185041 101 ntBASIC3.99□□□□□ -1.77
Rfx1P48377 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC3.99□□□□□ -1.77
Rfx1P48377 Gm45778-201ENSMUST00000211959 153 ntBASIC3.99□□□□□ -1.77
Rfx1P48377 AC122194.1-201ENSMUST00000220549 293 ntBASIC3.99□□□□□ -1.77
Rfx1P48377 AC154213.2-201ENSMUST00000227138 187 ntBASIC3.99□□□□□ -1.77
Rfx1P48377 Gm25789-201ENSMUST00000083294 76 ntBASIC3.99□□□□□ -1.77
Rfx1P48377 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Rfx1P48377 Olfr483-202ENSMUST00000215159 2691 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
Rfx1P48377 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Rfx1P48377 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Rfx1P48377 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Rfx1P48377 Gm23653-201ENSMUST00000116751 97 ntBASIC3.98□□□□□ -1.77
Rfx1P48377 Gm14811-201ENSMUST00000117070 117 ntBASIC3.98□□□□□ -1.77
Rfx1P48377 Gm13314-201ENSMUST00000118742 335 ntBASIC3.98□□□□□ -1.77
Rfx1P48377 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC3.98□□□□□ -1.77
Rfx1P48377 Gm12926-201ENSMUST00000121158 409 ntBASIC3.98□□□□□ -1.77
Rfx1P48377 Gm25051-201ENSMUST00000158602 249 ntBASIC3.98□□□□□ -1.77
Rfx1P48377 Gm25020-201ENSMUST00000178071 107 ntBASIC3.98□□□□□ -1.77
Rfx1P48377 Gm43193-201ENSMUST00000197732 441 ntBASIC3.98□□□□□ -1.77
Rfx1P48377 Gm43746-201ENSMUST00000200028 317 ntBASIC3.98□□□□□ -1.77
Rfx1P48377 Gm19790-201ENSMUST00000214414 251 ntBASIC3.98□□□□□ -1.77
Rfx1P48377 AC165293.1-201ENSMUST00000219669 329 ntBASIC3.98□□□□□ -1.77
Rfx1P48377 AC173345.2-201ENSMUST00000222795 153 ntBASIC3.98□□□□□ -1.77
Rfx1P48377 AC183092.1-201ENSMUST00000224301 153 ntBASIC3.98□□□□□ -1.77
Rfx1P48377 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Rfx1P48377 Gm25480-201ENSMUST00000083217 133 ntBASIC3.98□□□□□ -1.77
Rfx1P48377 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Rfx1P48377 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Rfx1P48377 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
Rfx1P48377 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Rfx1P48377 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Rfx1P48377 Gm16032-201ENSMUST00000118534 168 ntBASIC3.97□□□□□ -1.77
Rfx1P48377 Gm6829-201ENSMUST00000119858 360 ntBASIC3.97□□□□□ -1.77
Rfx1P48377 n-R5s32-201ENSMUST00000122495 103 ntBASIC3.97□□□□□ -1.77
Rfx1P48377 Gm26276-201ENSMUST00000157099 109 ntBASIC3.97□□□□□ -1.77
Rfx1P48377 Gm23536-201ENSMUST00000157541 134 ntBASIC3.97□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 94.3 ms