Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
Traf1P39428 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC2.42□□□□□ -2.02
Traf1P39428 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC2.42□□□□□ -2.02
Traf1P39428 Mir6406-201ENSMUST00000183592 120 ntBASIC2.42□□□□□ -2.02
Traf1P39428 Gm29134-201ENSMUST00000186579 126 ntBASIC2.42□□□□□ -2.02
Traf1P39428 Gm28337-201ENSMUST00000190425 666 ntBASIC2.42□□□□□ -2.02
Traf1P39428 Gm31123-201ENSMUST00000192094 666 ntBASIC2.42□□□□□ -2.02
Traf1P39428 Gm9227-201ENSMUST00000194733 566 ntBASIC2.42□□□□□ -2.02
Traf1P39428 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC2.42□□□□□ -2.02
Traf1P39428 Gm40810-201ENSMUST00000219149 253 ntBASIC2.42□□□□□ -2.02
Traf1P39428 Snora69-201ENSMUST00000083708 131 ntBASIC2.42□□□□□ -2.02
Traf1P39428 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
Traf1P39428 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC2.42□□□□□ -2.02
Traf1P39428 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC2.42□□□□□ -2.02
Traf1P39428 AL645643.1-201ENSMUST00000222438 3897 ntBASIC2.42□□□□□ -2.02
Traf1P39428 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
Traf1P39428 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.41□□□□□ -2.02
Traf1P39428 Gm23951-201ENSMUST00000104029 132 ntBASIC2.41□□□□□ -2.02
Traf1P39428 Gm22678-201ENSMUST00000116974 101 ntBASIC2.41□□□□□ -2.02
Traf1P39428 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC2.41□□□□□ -2.02
Traf1P39428 Gm25054-201ENSMUST00000157370 97 ntBASIC2.41□□□□□ -2.02
Traf1P39428 Gm22727-201ENSMUST00000158090 116 ntBASIC2.41□□□□□ -2.02
Traf1P39428 Gm24577-201ENSMUST00000158580 63 ntBASIC2.41□□□□□ -2.02
Traf1P39428 Gm25368-201ENSMUST00000158847 131 ntBASIC2.41□□□□□ -2.02
Traf1P39428 Cfap61-214ENSMUST00000167179 183 ntBASIC2.41□□□□□ -2.02
Traf1P39428 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC2.41□□□□□ -2.02
Traf1P39428 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC2.41□□□□□ -2.02
Traf1P39428 AC125488.1-201ENSMUST00000219586 212 ntBASIC2.41□□□□□ -2.02
Traf1P39428 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
Traf1P39428 Gm38388-201ENSMUST00000195569 1430 ntBASIC2.41□□□□□ -2.02
Traf1P39428 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
Traf1P39428 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC2.4□□□□□ -2.03
Traf1P39428 Gm11386-201ENSMUST00000117761 347 ntBASIC2.4□□□□□ -2.03
Traf1P39428 Gm5396-201ENSMUST00000121222 532 ntBASIC2.4□□□□□ -2.03
Traf1P39428 Trav20-201ENSMUST00000142754 347 ntBASIC2.4□□□□□ -2.03
Traf1P39428 Gm24409-201ENSMUST00000157881 152 ntBASIC2.4□□□□□ -2.03
Traf1P39428 Gm22803-201ENSMUST00000158049 283 ntBASIC2.4□□□□□ -2.03
Traf1P39428 Gm25314-201ENSMUST00000178810 79 ntBASIC2.4□□□□□ -2.03
Traf1P39428 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
Traf1P39428 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC2.4□□□□□ -2.03
Traf1P39428 Gm27588-201ENSMUST00000185096 263 ntBASIC2.4□□□□□ -2.03
Traf1P39428 Gm43512-201ENSMUST00000198495 176 ntBASIC2.4□□□□□ -2.03
Traf1P39428 Gm44533-201ENSMUST00000207782 268 ntBASIC2.4□□□□□ -2.03
Traf1P39428 Gm2829-201ENSMUST00000213121 499 ntBASIC2.4□□□□□ -2.03
Traf1P39428 AC120394.1-201ENSMUST00000217153 351 ntBASIC2.4□□□□□ -2.03
Traf1P39428 AC159709.1-201ENSMUST00000220445 349 ntBASIC2.4□□□□□ -2.03
Traf1P39428 Gm23453-201ENSMUST00000083326 106 ntBASIC2.4□□□□□ -2.03
Traf1P39428 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC2.4□□□□□ -2.03
Traf1P39428 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.03
Traf1P39428 Gm37642-201ENSMUST00000193166 1735 ntBASIC2.39□□□□□ -2.03
Traf1P39428 Gm24172-201ENSMUST00000104127 117 ntBASIC2.39□□□□□ -2.03
Traf1P39428 Gm24907-201ENSMUST00000116932 128 ntBASIC2.39□□□□□ -2.03
Traf1P39428 Gm14624-201ENSMUST00000117746 192 ntBASIC2.39□□□□□ -2.03
Traf1P39428 Gm15899-201ENSMUST00000128586 238 ntBASIC2.39□□□□□ -2.03
Traf1P39428 Gm17148-201ENSMUST00000164702 249 ntBASIC2.39□□□□□ -2.03
Traf1P39428 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Traf1P39428 Gm22800-201ENSMUST00000175627 94 ntBASIC2.39□□□□□ -2.03
Traf1P39428 Gm34073-201ENSMUST00000195736 212 ntBASIC2.39□□□□□ -2.03
Traf1P39428 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC2.39□□□□□ -2.03
Traf1P39428 AC110380.1-201ENSMUST00000226987 389 ntBASIC2.39□□□□□ -2.03
Traf1P39428 AC144628.2-201ENSMUST00000227374 352 ntBASIC2.39□□□□□ -2.03
Traf1P39428 Zfp735-201ENSMUST00000080407 3746 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
Traf1P39428 Gm42536-201ENSMUST00000197562 1613 ntBASIC2.39□□□□□ -2.03
Traf1P39428 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC2.38□□□□□ -2.03
Traf1P39428 Gm22656-201ENSMUST00000104199 171 ntBASIC2.38□□□□□ -2.03
Traf1P39428 Gm13457-201ENSMUST00000117885 267 ntBASIC2.38□□□□□ -2.03
Traf1P39428 Gm13588-201ENSMUST00000120026 135 ntBASIC2.38□□□□□ -2.03
Traf1P39428 Gm14301-201ENSMUST00000120181 324 ntBASIC2.38□□□□□ -2.03
Traf1P39428 Gm26345-201ENSMUST00000157534 120 ntBASIC2.38□□□□□ -2.03
Traf1P39428 Gm22654-201ENSMUST00000157874 105 ntBASIC2.38□□□□□ -2.03
Traf1P39428 Gm23016-201ENSMUST00000158431 62 ntBASIC2.38□□□□□ -2.03
Traf1P39428 Gm26430-201ENSMUST00000178054 107 ntBASIC2.38□□□□□ -2.03
Traf1P39428 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Traf1P39428 Mir6341-201ENSMUST00000183490 121 ntBASIC2.38□□□□□ -2.03
Traf1P39428 Mir7016-201ENSMUST00000184308 72 ntBASIC2.38□□□□□ -2.03
Traf1P39428 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
Traf1P39428 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC2.38□□□□□ -2.03
Traf1P39428 Gm3724-201ENSMUST00000197957 349 ntBASIC2.38□□□□□ -2.03
Traf1P39428 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC2.38□□□□□ -2.03
Traf1P39428 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC2.38□□□□□ -2.03
Traf1P39428 Gm44564-201ENSMUST00000207985 180 ntBASIC2.38□□□□□ -2.03
Traf1P39428 Gm45315-201ENSMUST00000209283 333 ntBASIC2.38□□□□□ -2.03
Traf1P39428 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC2.38□□□□□ -2.03
Traf1P39428 AC147240.1-201ENSMUST00000218767 431 ntBASIC2.38□□□□□ -2.03
Traf1P39428 AC166830.2-201ENSMUST00000225821 196 ntBASIC2.38□□□□□ -2.03
Traf1P39428 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Traf1P39428 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC2.38□□□□□ -2.03
Traf1P39428 Gm26126-201ENSMUST00000083188 164 ntBASIC2.38□□□□□ -2.03
Traf1P39428 Gm23462-201ENSMUST00000083264 104 ntBASIC2.38□□□□□ -2.03
Traf1P39428 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Traf1P39428 Gm42635-201ENSMUST00000200266 2571 ntBASIC2.38□□□□□ -2.03
Traf1P39428 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC2.38□□□□□ -2.03
Traf1P39428 Gm12433-201ENSMUST00000119659 255 ntBASIC2.37□□□□□ -2.03
Traf1P39428 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Traf1P39428 Gm23589-201ENSMUST00000157660 105 ntBASIC2.37□□□□□ -2.03
Traf1P39428 Gm23557-201ENSMUST00000157820 138 ntBASIC2.37□□□□□ -2.03
Traf1P39428 Gm24858-201ENSMUST00000158058 323 ntBASIC2.37□□□□□ -2.03
Traf1P39428 Gm24837-201ENSMUST00000158683 81 ntBASIC2.37□□□□□ -2.03
Traf1P39428 Gm23813-201ENSMUST00000175153 77 ntBASIC2.37□□□□□ -2.03
Traf1P39428 Gm24573-201ENSMUST00000175499 112 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 144 ms