Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Gm45907-201ENSMUST00000213023 193 ntBASIC3.17□□□□□ -1.9
LdlrP35951 Gm9370-201ENSMUST00000222787 609 ntBASIC3.17□□□□□ -1.9
LdlrP35951 Snord82-201ENSMUST00000082889 70 ntBASIC3.17□□□□□ -1.9
LdlrP35951 AF357341-201ENSMUST00000083088 75 ntBASIC3.17□□□□□ -1.9
LdlrP35951 Gm22154-201ENSMUST00000083844 131 ntBASIC3.17□□□□□ -1.9
LdlrP35951 Gm37296-201ENSMUST00000192728 2922 ntBASIC3.17□□□□□ -1.9
LdlrP35951 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
LdlrP35951 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
LdlrP35951 Gm42770-201ENSMUST00000199657 4155 ntBASIC3.16□□□□□ -1.9
LdlrP35951 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.16□□□□□ -1.9
LdlrP35951 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LdlrP35951 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LdlrP35951 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
LdlrP35951 Trav7-2-201ENSMUST00000103636 336 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
LdlrP35951 Gm23791-201ENSMUST00000122553 293 ntBASIC3.16□□□□□ -1.9
LdlrP35951 Gm25914-201ENSMUST00000157618 153 ntBASIC3.16□□□□□ -1.9
LdlrP35951 Gm23586-201ENSMUST00000157657 123 ntBASIC3.16□□□□□ -1.9
LdlrP35951 Gm24167-201ENSMUST00000177733 124 ntBASIC3.16□□□□□ -1.9
LdlrP35951 Gm25615-201ENSMUST00000177836 94 ntBASIC3.16□□□□□ -1.9
LdlrP35951 Gm24028-201ENSMUST00000178991 124 ntBASIC3.16□□□□□ -1.9
LdlrP35951 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC3.16□□□□□ -1.9
LdlrP35951 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC3.16□□□□□ -1.9
LdlrP35951 Trav7d-2-201ENSMUST00000200127 337 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
LdlrP35951 Gm43899-201ENSMUST00000203675 246 ntBASIC3.16□□□□□ -1.9
LdlrP35951 Gm18188-201ENSMUST00000219386 478 ntBASIC3.16□□□□□ -1.9
LdlrP35951 Gm46993-201ENSMUST00000220708 259 ntBASIC3.16□□□□□ -1.9
LdlrP35951 AC165106.2-201ENSMUST00000226749 97 ntBASIC3.16□□□□□ -1.9
LdlrP35951 AC160550.3-201ENSMUST00000226818 400 ntBASIC3.16□□□□□ -1.9
LdlrP35951 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LdlrP35951 Gm25081-201ENSMUST00000082534 108 ntBASIC3.16□□□□□ -1.9
LdlrP35951 Gm26166-201ENSMUST00000083788 107 ntBASIC3.16□□□□□ -1.9
LdlrP35951 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.16□□□□□ -1.9
LdlrP35951 1700008H02Rik-201ENSMUST00000201220 1684 ntBASIC3.16□□□□□ -1.9
LdlrP35951 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
LdlrP35951 Olfr732-202ENSMUST00000213701 3862 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
LdlrP35951 AC152159.1-201ENSMUST00000226719 2769 ntBASIC3.16□□□□□ -1.9
LdlrP35951 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
LdlrP35951 Olfr1039-202ENSMUST00000214364 3925 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
LdlrP35951 Olfr1202-202ENSMUST00000214703 3665 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
LdlrP35951 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
LdlrP35951 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
LdlrP35951 Gm24116-201ENSMUST00000103975 107 ntBASIC3.15□□□□□ -1.91
LdlrP35951 Gm25421-201ENSMUST00000104218 164 ntBASIC3.15□□□□□ -1.91
LdlrP35951 Gm14593-201ENSMUST00000119948 294 ntBASIC3.15□□□□□ -1.91
LdlrP35951 Gm14922-201ENSMUST00000121131 163 ntBASIC3.15□□□□□ -1.91
LdlrP35951 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC3.15□□□□□ -1.91
LdlrP35951 Mir1942-201ENSMUST00000157274 63 ntBASIC3.15□□□□□ -1.91
LdlrP35951 Gm24213-201ENSMUST00000158255 258 ntBASIC3.15□□□□□ -1.91
LdlrP35951 Gm24676-201ENSMUST00000158758 75 ntBASIC3.15□□□□□ -1.91
LdlrP35951 Gm27535-201ENSMUST00000183814 157 ntBASIC3.15□□□□□ -1.91
LdlrP35951 Gm7329-201ENSMUST00000185915 210 ntBASIC3.15□□□□□ -1.91
LdlrP35951 Gm40810-201ENSMUST00000219149 253 ntBASIC3.15□□□□□ -1.91
LdlrP35951 AC121942.2-201ENSMUST00000223824 600 ntBASIC3.15□□□□□ -1.91
LdlrP35951 AC154262.1-201ENSMUST00000225976 286 ntBASIC3.15□□□□□ -1.91
LdlrP35951 AC124746.2-201ENSMUST00000226594 427 ntBASIC3.15□□□□□ -1.91
LdlrP35951 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
LdlrP35951 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
LdlrP35951 Gm22304-201ENSMUST00000082688 129 ntBASIC3.15□□□□□ -1.91
LdlrP35951 Olfr681-204ENSMUST00000215564 4487 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
LdlrP35951 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.91
LdlrP35951 Scai-201ENSMUST00000038874 10709 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
LdlrP35951 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LdlrP35951 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC3.14□□□□□ -1.91
LdlrP35951 Vmn2r71-201ENSMUST00000172338 2568 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
LdlrP35951 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
LdlrP35951 AC153526.2-201ENSMUST00000218206 2031 ntBASIC3.14□□□□□ -1.91
LdlrP35951 Gm13355-201ENSMUST00000117996 317 ntBASIC3.14□□□□□ -1.91
LdlrP35951 Gm23234-201ENSMUST00000157304 134 ntBASIC3.14□□□□□ -1.91
LdlrP35951 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
LdlrP35951 Gm23571-201ENSMUST00000180073 127 ntBASIC3.14□□□□□ -1.91
LdlrP35951 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
LdlrP35951 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
LdlrP35951 Gm28848-201ENSMUST00000189984 168 ntBASIC3.14□□□□□ -1.91
LdlrP35951 Gm1833-201ENSMUST00000191608 682 ntBASIC3.14□□□□□ -1.91
LdlrP35951 Igkv2-113-201ENSMUST00000196138 362 ntBASIC3.14□□□□□ -1.91
LdlrP35951 Mir465d-201ENSMUST00000196314 58 ntBASIC3.14□□□□□ -1.91
LdlrP35951 Gm44337-201ENSMUST00000196553 114 ntBASIC3.14□□□□□ -1.91
LdlrP35951 Gm20144-201ENSMUST00000203031 165 ntBASIC3.14□□□□□ -1.91
LdlrP35951 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC3.14□□□□□ -1.91
LdlrP35951 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
LdlrP35951 Gm9377-201ENSMUST00000207227 623 ntBASIC3.14□□□□□ -1.91
LdlrP35951 Gm44594-201ENSMUST00000208982 407 ntBASIC3.14□□□□□ -1.91
LdlrP35951 Gm6796-201ENSMUST00000211919 243 ntBASIC3.14□□□□□ -1.91
LdlrP35951 Gm30674-201ENSMUST00000214523 392 ntBASIC3.14□□□□□ -1.91
LdlrP35951 AC100209.2-201ENSMUST00000224461 451 ntBASIC3.14□□□□□ -1.91
LdlrP35951 Gm22245-201ENSMUST00000082479 103 ntBASIC3.14□□□□□ -1.91
LdlrP35951 Gm43032-201ENSMUST00000197967 3123 ntBASIC3.14□□□□□ -1.91
LdlrP35951 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
LdlrP35951 Gm10400-201ENSMUST00000203920 3835 ntBASIC3.14□□□□□ -1.91
LdlrP35951 Ifi213-202ENSMUST00000150649 2748 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
LdlrP35951 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.13□□□□□ -1.91
LdlrP35951 Gm15302-201ENSMUST00000117779 2630 ntBASIC3.13□□□□□ -1.91
LdlrP35951 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
LdlrP35951 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
LdlrP35951 Gm24132-201ENSMUST00000104745 91 ntBASIC3.13□□□□□ -1.91
LdlrP35951 Gm6762-201ENSMUST00000121769 289 ntBASIC3.13□□□□□ -1.91
LdlrP35951 Gm14629-201ENSMUST00000122428 144 ntBASIC3.13□□□□□ -1.91
LdlrP35951 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
LdlrP35951 Gm37290-201ENSMUST00000195775 339 ntBASIC3.13□□□□□ -1.91
LdlrP35951 AC173115.1-201ENSMUST00000220835 211 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 111.6 ms