Protein–RNA interactions for Protein: P31313

Hoxc11, Homeobox protein Hox-C11, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc11P31313 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC2.63□□□□□ -1.99
Hoxc11P31313 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
Hoxc11P31313 Gm14624-201ENSMUST00000117746 192 ntBASIC2.62□□□□□ -1.99
Hoxc11P31313 Gm23867-201ENSMUST00000122649 274 ntBASIC2.62□□□□□ -1.99
Hoxc11P31313 Gm25020-201ENSMUST00000178071 107 ntBASIC2.62□□□□□ -1.99
Hoxc11P31313 Gm27410-201ENSMUST00000183851 115 ntBASIC2.62□□□□□ -1.99
Hoxc11P31313 Gm28627-201ENSMUST00000186141 453 ntBASIC2.62□□□□□ -1.99
Hoxc11P31313 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Hoxc11P31313 Gm37313-201ENSMUST00000191673 290 ntBASIC2.62□□□□□ -1.99
Hoxc11P31313 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.62□□□□□ -1.99
Hoxc11P31313 Gm43669-201ENSMUST00000198229 436 ntBASIC2.62□□□□□ -1.99
Hoxc11P31313 Gm44811-201ENSMUST00000209120 228 ntBASIC2.62□□□□□ -1.99
Hoxc11P31313 CT030166.2-201ENSMUST00000222021 368 ntBASIC2.62□□□□□ -1.99
Hoxc11P31313 AC114010.1-201ENSMUST00000222060 379 ntBASIC2.62□□□□□ -1.99
Hoxc11P31313 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.62□□□□□ -1.99
Hoxc11P31313 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
Hoxc11P31313 mt-Tr-201ENSMUST00000082412 68 ntBASIC2.62□□□□□ -1.99
Hoxc11P31313 Gm25079-201ENSMUST00000082529 203 ntBASIC2.62□□□□□ -1.99
Hoxc11P31313 n-R5s176-201ENSMUST00000082683 109 ntBASIC2.62□□□□□ -1.99
Hoxc11P31313 Snord104-201ENSMUST00000083192 70 ntBASIC2.62□□□□□ -1.99
Hoxc11P31313 Gm23246-201ENSMUST00000083371 67 ntBASIC2.62□□□□□ -1.99
Hoxc11P31313 Gm23041-201ENSMUST00000083868 106 ntBASIC2.62□□□□□ -1.99
Hoxc11P31313 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC2.62□□□□□ -1.99
Hoxc11P31313 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
Hoxc11P31313 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
Hoxc11P31313 Gm22782-201ENSMUST00000104082 132 ntBASIC2.61□□□□□ -1.99
Hoxc11P31313 Gm12042-201ENSMUST00000120479 301 ntBASIC2.61□□□□□ -1.99
Hoxc11P31313 Gm23381-201ENSMUST00000157676 94 ntBASIC2.61□□□□□ -1.99
Hoxc11P31313 Gm25012-201ENSMUST00000158396 164 ntBASIC2.61□□□□□ -1.99
Hoxc11P31313 Snord11-201ENSMUST00000158468 84 ntBASIC2.61□□□□□ -1.99
Hoxc11P31313 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC2.61□□□□□ -1.99
Hoxc11P31313 Gm29397-201ENSMUST00000185205 333 ntBASIC2.61□□□□□ -1.99
Hoxc11P31313 AC155839.1-201ENSMUST00000200105 147 ntBASIC2.61□□□□□ -1.99
Hoxc11P31313 AC164161.1-201ENSMUST00000214076 639 ntBASIC2.61□□□□□ -1.99
Hoxc11P31313 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.61□□□□□ -1.99
Hoxc11P31313 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.61□□□□□ -1.99
Hoxc11P31313 2900042G08Rik-201ENSMUST00000221776 650 ntBASIC2.61□□□□□ -1.99
Hoxc11P31313 AC122393.1-201ENSMUST00000226570 319 ntBASIC2.61□□□□□ -1.99
Hoxc11P31313 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
Hoxc11P31313 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
Hoxc11P31313 Snord68-201ENSMUST00000082516 86 ntBASIC2.61□□□□□ -1.99
Hoxc11P31313 Gm22062-201ENSMUST00000082563 107 ntBASIC2.61□□□□□ -1.99
Hoxc11P31313 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
Hoxc11P31313 Gm24122-201ENSMUST00000104107 132 ntBASIC2.6□□□□□ -1.99
Hoxc11P31313 Gm22021-201ENSMUST00000104353 107 ntBASIC2.6□□□□□ -1.99
Hoxc11P31313 Mir669d-2-201ENSMUST00000116854 86 ntBASIC2.6□□□□□ -1.99
Hoxc11P31313 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC2.6□□□□□ -1.99
Hoxc11P31313 Gm25781-201ENSMUST00000122527 84 ntBASIC2.6□□□□□ -1.99
Hoxc11P31313 Gm23120-201ENSMUST00000157654 287 ntBASIC2.6□□□□□ -1.99
Hoxc11P31313 Gm22316-201ENSMUST00000158012 216 ntBASIC2.6□□□□□ -1.99
Hoxc11P31313 Gm7592-201ENSMUST00000160674 627 ntBASIC2.6□□□□□ -1.99
Hoxc11P31313 Gm32033-201ENSMUST00000193483 339 ntBASIC2.6□□□□□ -1.99
Hoxc11P31313 Gm26314-201ENSMUST00000083891 107 ntBASIC2.6□□□□□ -1.99
Hoxc11P31313 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC2.59□□□□□ -1.99
Hoxc11P31313 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.59□□□□□ -1.99
Hoxc11P31313 Gm13885-201ENSMUST00000117569 187 ntBASIC2.59□□□□□ -1.99
Hoxc11P31313 Cox20-ps-201ENSMUST00000119872 353 ntBASIC2.59□□□□□ -1.99
Hoxc11P31313 Gm13729-201ENSMUST00000120328 406 ntBASIC2.59□□□□□ -1.99
Hoxc11P31313 Gm13862-201ENSMUST00000121220 197 ntBASIC2.59□□□□□ -1.99
Hoxc11P31313 Gm24922-201ENSMUST00000158511 102 ntBASIC2.59□□□□□ -1.99
Hoxc11P31313 Gm25488-201ENSMUST00000158728 118 ntBASIC2.59□□□□□ -1.99
Hoxc11P31313 Gm23024-201ENSMUST00000158770 292 ntBASIC2.59□□□□□ -1.99
Hoxc11P31313 Gm17065-201ENSMUST00000165245 239 ntBASIC2.59□□□□□ -1.99
Hoxc11P31313 Gm26400-201ENSMUST00000175012 85 ntBASIC2.59□□□□□ -1.99
Hoxc11P31313 Gm24816-201ENSMUST00000175311 151 ntBASIC2.59□□□□□ -1.99
Hoxc11P31313 Gm20718-201ENSMUST00000176058 259 ntBASIC2.59□□□□□ -1.99
Hoxc11P31313 Gm20257-202ENSMUST00000188643 130 ntBASIC2.59□□□□□ -1.99
Hoxc11P31313 Gm44182-201ENSMUST00000204052 115 ntBASIC2.59□□□□□ -1.99
Hoxc11P31313 Gm44654-201ENSMUST00000208052 329 ntBASIC2.59□□□□□ -1.99
Hoxc11P31313 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC2.59□□□□□ -1.99
Hoxc11P31313 Olfr927-ps1-201ENSMUST00000216759 782 ntBASIC2.59□□□□□ -1.99
Hoxc11P31313 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Hoxc11P31313 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -1.99
Hoxc11P31313 Olfr201-202ENSMUST00000216834 3706 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
Hoxc11P31313 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -2
Hoxc11P31313 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.58□□□□□ -2
Hoxc11P31313 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
Hoxc11P31313 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.58□□□□□ -2
Hoxc11P31313 Gm23142-201ENSMUST00000101848 105 ntBASIC2.58□□□□□ -2
Hoxc11P31313 Gm26240-201ENSMUST00000101893 105 ntBASIC2.58□□□□□ -2
Hoxc11P31313 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC2.58□□□□□ -2
Hoxc11P31313 Gm26247-201ENSMUST00000116702 91 ntBASIC2.58□□□□□ -2
Hoxc11P31313 Gm22032-201ENSMUST00000116946 116 ntBASIC2.58□□□□□ -2
Hoxc11P31313 Gm22678-201ENSMUST00000116974 101 ntBASIC2.58□□□□□ -2
Hoxc11P31313 Gm24436-201ENSMUST00000157889 302 ntBASIC2.58□□□□□ -2
Hoxc11P31313 Gm22535-201ENSMUST00000158174 119 ntBASIC2.58□□□□□ -2
Hoxc11P31313 Gm24726-201ENSMUST00000158232 121 ntBASIC2.58□□□□□ -2
Hoxc11P31313 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
Hoxc11P31313 Gm17919-201ENSMUST00000173344 312 ntBASIC2.58□□□□□ -2
Hoxc11P31313 Gm20660-201ENSMUST00000177515 289 ntBASIC2.58□□□□□ -2
Hoxc11P31313 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC2.58□□□□□ -2
Hoxc11P31313 Gm44429-201ENSMUST00000203542 186 ntBASIC2.58□□□□□ -2
Hoxc11P31313 Gm44010-201ENSMUST00000204432 331 ntBASIC2.58□□□□□ -2
Hoxc11P31313 Gm45941-202ENSMUST00000223144 389 ntTSL 2 BASIC2.58□□□□□ -2
Hoxc11P31313 AC133156.1-202ENSMUST00000227284 363 ntBASIC2.58□□□□□ -2
Hoxc11P31313 Gm26458-201ENSMUST00000082832 128 ntBASIC2.58□□□□□ -2
Hoxc11P31313 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.58□□□□□ -2
Hoxc11P31313 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.58□□□□□ -2
Hoxc11P31313 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
Hoxc11P31313 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.58□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 132.9 ms