Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
P20040 Gm15010-201ENSMUST00000117153 407 ntBASIC1.66□□□□□ -2.14
P20040 Gm13720-201ENSMUST00000120741 196 ntBASIC1.66□□□□□ -2.14
P20040 Gm15365-201ENSMUST00000122392 300 ntBASIC1.66□□□□□ -2.14
P20040 Gm22985-201ENSMUST00000122754 116 ntBASIC1.66□□□□□ -2.14
P20040 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
P20040 Gm25384-201ENSMUST00000157807 105 ntBASIC1.66□□□□□ -2.14
P20040 Gm22328-201ENSMUST00000158074 112 ntBASIC1.66□□□□□ -2.14
P20040 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC1.66□□□□□ -2.14
P20040 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC1.66□□□□□ -2.14
P20040 Gm28740-201ENSMUST00000186142 215 ntBASIC1.66□□□□□ -2.14
P20040 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
P20040 Mir7118-201ENSMUST00000197760 61 ntBASIC1.66□□□□□ -2.14
P20040 Gm44181-201ENSMUST00000203106 483 ntBASIC1.66□□□□□ -2.14
P20040 AL772265.1-201ENSMUST00000214379 305 ntBASIC1.66□□□□□ -2.14
P20040 AC144671.1-201ENSMUST00000215265 99 ntBASIC1.66□□□□□ -2.14
P20040 Gm19441-201ENSMUST00000221545 330 ntBASIC1.66□□□□□ -2.14
P20040 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC1.66□□□□□ -2.14
P20040 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
P20040 Gm23453-201ENSMUST00000083326 106 ntBASIC1.66□□□□□ -2.14
P20040 Gm26175-201ENSMUST00000083794 131 ntBASIC1.66□□□□□ -2.14
P20040 Snora33-201ENSMUST00000093556 129 ntBASIC1.66□□□□□ -2.14
P20040 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
P20040 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
P20040 Gm37096-201ENSMUST00000192317 2058 ntBASIC1.65□□□□□ -2.14
P20040 Gm22834-201ENSMUST00000102021 79 ntBASIC1.65□□□□□ -2.15
P20040 Gm17132-201ENSMUST00000109542 1158 ntBASIC1.65□□□□□ -2.15
P20040 Gm14293-201ENSMUST00000118528 577 ntBASIC1.65□□□□□ -2.15
P20040 Gm13153-201ENSMUST00000120969 637 ntBASIC1.65□□□□□ -2.15
P20040 Gm12926-201ENSMUST00000121158 409 ntBASIC1.65□□□□□ -2.15
P20040 Gm5396-201ENSMUST00000121222 532 ntBASIC1.65□□□□□ -2.15
P20040 n-R5s159-201ENSMUST00000122681 120 ntBASIC1.65□□□□□ -2.15
P20040 Gm24892-201ENSMUST00000122747 104 ntBASIC1.65□□□□□ -2.15
P20040 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC1.65□□□□□ -2.15
P20040 Gm4128-201ENSMUST00000154338 461 ntTSL 3 BASIC1.65□□□□□ -2.15
P20040 Gm23589-201ENSMUST00000157660 105 ntBASIC1.65□□□□□ -2.15
P20040 Gm22843-201ENSMUST00000157710 134 ntBASIC1.65□□□□□ -2.15
P20040 Gm22803-201ENSMUST00000158049 283 ntBASIC1.65□□□□□ -2.15
P20040 Gm24656-201ENSMUST00000177548 132 ntBASIC1.65□□□□□ -2.15
P20040 Mir6406-201ENSMUST00000183592 120 ntBASIC1.65□□□□□ -2.15
P20040 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
P20040 Gm43583-201ENSMUST00000199235 303 ntBASIC1.65□□□□□ -2.15
P20040 Gm43487-201ENSMUST00000200331 1031 ntBASIC1.65□□□□□ -2.15
P20040 AC124772.1-201ENSMUST00000221325 151 ntBASIC1.65□□□□□ -2.15
P20040 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
P20040 Gm25402-201ENSMUST00000082966 131 ntBASIC1.65□□□□□ -2.15
P20040 Mir151-201ENSMUST00000083678 68 ntBASIC1.65□□□□□ -2.15
P20040 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
P20040 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
P20040 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
P20040 Gm13672-201ENSMUST00000117554 459 ntBASIC1.64□□□□□ -2.15
P20040 Gm11786-201ENSMUST00000120799 155 ntBASIC1.64□□□□□ -2.15
P20040 Gm15529-201ENSMUST00000121833 994 ntBASIC1.64□□□□□ -2.15
P20040 Gm25269-201ENSMUST00000122601 104 ntBASIC1.64□□□□□ -2.15
P20040 Gm26149-201ENSMUST00000157432 108 ntBASIC1.64□□□□□ -2.15
P20040 Gm24858-201ENSMUST00000158058 323 ntBASIC1.64□□□□□ -2.15
P20040 Ear-ps4-201ENSMUST00000166834 450 ntBASIC1.64□□□□□ -2.15
P20040 Gm25994-201ENSMUST00000175392 101 ntBASIC1.64□□□□□ -2.15
P20040 Mir195b-201ENSMUST00000184814 97 ntBASIC1.64□□□□□ -2.15
P20040 Mir6901-201ENSMUST00000185062 62 ntBASIC1.64□□□□□ -2.15
P20040 Gm37778-201ENSMUST00000191732 190 ntBASIC1.64□□□□□ -2.15
P20040 Gm44387-201ENSMUST00000196298 145 ntBASIC1.64□□□□□ -2.15
P20040 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
P20040 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
P20040 Gm43914-201ENSMUST00000203592 594 ntBASIC1.64□□□□□ -2.15
P20040 Gm40810-201ENSMUST00000219149 253 ntBASIC1.64□□□□□ -2.15
P20040 Gm42942-201ENSMUST00000196086 1328 ntBASIC1.64□□□□□ -2.15
P20040 Gm6444-201ENSMUST00000119611 458 ntBASIC1.63□□□□□ -2.15
P20040 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC1.63□□□□□ -2.15
P20040 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC1.63□□□□□ -2.15
P20040 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC1.63□□□□□ -2.15
P20040 Mir1949-201ENSMUST00000157434 141 ntBASIC1.63□□□□□ -2.15
P20040 Gm23411-201ENSMUST00000157988 62 ntBASIC1.63□□□□□ -2.15
P20040 Gm27510-201ENSMUST00000158214 64 ntBASIC1.63□□□□□ -2.15
P20040 Gm24084-201ENSMUST00000175173 137 ntBASIC1.63□□□□□ -2.15
P20040 Gm9892-201ENSMUST00000182415 992 ntBASIC1.63□□□□□ -2.15
P20040 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
P20040 Gm42570-201ENSMUST00000195937 292 ntBASIC1.63□□□□□ -2.15
P20040 Gm43512-201ENSMUST00000198495 176 ntBASIC1.63□□□□□ -2.15
P20040 Gm44482-201ENSMUST00000199232 103 ntBASIC1.63□□□□□ -2.15
P20040 Gm44128-201ENSMUST00000204909 219 ntBASIC1.63□□□□□ -2.15
P20040 Gm18617-201ENSMUST00000222311 259 ntBASIC1.63□□□□□ -2.15
P20040 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC1.63□□□□□ -2.15
P20040 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC1.63□□□□□ -2.15
P20040 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.63□□□□□ -2.15
P20040 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC1.62□□□□□ -2.15
P20040 Gm22750-201ENSMUST00000102076 103 ntBASIC1.62□□□□□ -2.15
P20040 Gm23950-201ENSMUST00000104026 129 ntBASIC1.62□□□□□ -2.15
P20040 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC1.62□□□□□ -2.15
P20040 Gm25115-201ENSMUST00000157187 140 ntBASIC1.62□□□□□ -2.15
P20040 Gm24191-201ENSMUST00000157977 122 ntBASIC1.62□□□□□ -2.15
P20040 Gm7592-201ENSMUST00000160674 627 ntBASIC1.62□□□□□ -2.15
P20040 Gm7953-201ENSMUST00000168278 469 ntBASIC1.62□□□□□ -2.15
P20040 Gm24333-201ENSMUST00000175101 84 ntBASIC1.62□□□□□ -2.15
P20040 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC1.62□□□□□ -2.15
P20040 Mir7014-201ENSMUST00000183853 63 ntBASIC1.62□□□□□ -2.15
P20040 Mir6399-201ENSMUST00000184050 84 ntBASIC1.62□□□□□ -2.15
P20040 Gm43431-201ENSMUST00000198577 340 ntBASIC1.62□□□□□ -2.15
P20040 Gm18696-201ENSMUST00000220103 274 ntBASIC1.62□□□□□ -2.15
P20040 AC163357.1-201ENSMUST00000220847 233 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 96.3 ms