Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Gm27695-201ENSMUST00000184301 91 ntBASIC4.01□□□□□ -1.77
Msx1P13297 Gm4248-201ENSMUST00000196905 316 ntBASIC4.01□□□□□ -1.77
Msx1P13297 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC4.01□□□□□ -1.77
Msx1P13297 Gm43155-201ENSMUST00000202661 494 ntBASIC4.01□□□□□ -1.77
Msx1P13297 Olfr694-204ENSMUST00000216895 4853 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Msx1P13297 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
Msx1P13297 AC153967.1-201ENSMUST00000219333 3190 ntBASIC4.01□□□□□ -1.77
Msx1P13297 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Msx1P13297 Gm37792-201ENSMUST00000195761 3413 ntBASIC4.01□□□□□ -1.77
Msx1P13297 Gm10730-201ENSMUST00000194097 2723 ntBASIC4.01□□□□□ -1.77
Msx1P13297 Gm7452-202ENSMUST00000202891 3039 ntBASIC4□□□□□ -1.77
Msx1P13297 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Msx1P13297 Gm15303-201ENSMUST00000118676 2624 ntBASIC4□□□□□ -1.77
Msx1P13297 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Msx1P13297 Vmn2r108-201ENSMUST00000167314 2568 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Msx1P13297 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC4□□□□□ -1.77
Msx1P13297 Gm25817-201ENSMUST00000177758 121 ntBASIC4□□□□□ -1.77
Msx1P13297 Gm24766-201ENSMUST00000179182 121 ntBASIC4□□□□□ -1.77
Msx1P13297 Gm42739-201ENSMUST00000200687 226 ntBASIC4□□□□□ -1.77
Msx1P13297 Gm46233-201ENSMUST00000217831 449 ntBASIC4□□□□□ -1.77
Msx1P13297 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC4□□□□□ -1.77
Msx1P13297 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Msx1P13297 Gm43256-201ENSMUST00000199995 3091 ntBASIC4□□□□□ -1.77
Msx1P13297 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
Msx1P13297 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
Msx1P13297 Olfr826-203ENSMUST00000216661 2858 ntAPPRIS P1 TSL 3 BASIC4□□□□□ -1.77
Msx1P13297 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Msx1P13297 Gm44283-201ENSMUST00000204461 3950 ntBASIC3.99□□□□□ -1.77
Msx1P13297 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Msx1P13297 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC3.99□□□□□ -1.77
Msx1P13297 AC160984.1-201ENSMUST00000225855 3154 ntBASIC3.99□□□□□ -1.77
Msx1P13297 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Msx1P13297 Gm15268-201ENSMUST00000118845 352 ntBASIC3.99□□□□□ -1.77
Msx1P13297 Gm12252-201ENSMUST00000119517 219 ntBASIC3.99□□□□□ -1.77
Msx1P13297 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC3.99□□□□□ -1.77
Msx1P13297 Gm24358-201ENSMUST00000158424 288 ntBASIC3.99□□□□□ -1.77
Msx1P13297 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC3.99□□□□□ -1.77
Msx1P13297 Gm42719-201ENSMUST00000197393 355 ntBASIC3.99□□□□□ -1.77
Msx1P13297 Gm43381-201ENSMUST00000198553 165 ntBASIC3.99□□□□□ -1.77
Msx1P13297 AC150560.2-201ENSMUST00000227208 171 ntBASIC3.99□□□□□ -1.77
Msx1P13297 n-R5s162-201ENSMUST00000082581 119 ntBASIC3.99□□□□□ -1.77
Msx1P13297 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC3.99□□□□□ -1.77
Msx1P13297 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Msx1P13297 Abca5-201ENSMUST00000043961 8231 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Msx1P13297 Tlr7-203ENSMUST00000112164 3468 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Msx1P13297 Gm37011-201ENSMUST00000195543 2935 ntBASIC3.98□□□□□ -1.77
Msx1P13297 AC156025.1-201ENSMUST00000223597 3551 ntBASIC3.98□□□□□ -1.77
Msx1P13297 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC3.98□□□□□ -1.77
Msx1P13297 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Msx1P13297 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Msx1P13297 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
Msx1P13297 Traj31-201ENSMUST00000103710 57 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
Msx1P13297 Gm22071-201ENSMUST00000116857 83 ntBASIC3.98□□□□□ -1.77
Msx1P13297 Gm8200-201ENSMUST00000122390 222 ntBASIC3.98□□□□□ -1.77
Msx1P13297 Gm15365-201ENSMUST00000122392 300 ntBASIC3.98□□□□□ -1.77
Msx1P13297 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC3.98□□□□□ -1.77
Msx1P13297 Gm23816-201ENSMUST00000179617 132 ntBASIC3.98□□□□□ -1.77
Msx1P13297 Gm27869-201ENSMUST00000184327 122 ntBASIC3.98□□□□□ -1.77
Msx1P13297 Igkv13-57-1-201ENSMUST00000198063 305 ntBASIC3.98□□□□□ -1.77
Msx1P13297 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC3.98□□□□□ -1.77
Msx1P13297 AC161054.1-201ENSMUST00000214319 184 ntBASIC3.98□□□□□ -1.77
Msx1P13297 AC183096.2-201ENSMUST00000228733 457 ntBASIC3.98□□□□□ -1.77
Msx1P13297 Mir201-201ENSMUST00000083470 66 ntBASIC3.98□□□□□ -1.77
Msx1P13297 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC3.98□□□□□ -1.77
Msx1P13297 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
Msx1P13297 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
Msx1P13297 Ccdc178-201ENSMUST00000025160 3335 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Msx1P13297 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Msx1P13297 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
Msx1P13297 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
Msx1P13297 Gm44177-201ENSMUST00000204338 2667 ntBASIC3.97□□□□□ -1.77
Msx1P13297 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
Msx1P13297 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Msx1P13297 Gm13687-201ENSMUST00000119857 282 ntBASIC3.97□□□□□ -1.77
Msx1P13297 Gm13913-201ENSMUST00000121126 260 ntBASIC3.97□□□□□ -1.77
Msx1P13297 Gm25104-201ENSMUST00000122476 163 ntBASIC3.97□□□□□ -1.77
Msx1P13297 Gm23599-201ENSMUST00000157261 251 ntBASIC3.97□□□□□ -1.77
Msx1P13297 Gm25572-201ENSMUST00000157527 172 ntBASIC3.97□□□□□ -1.77
Msx1P13297 Gm24846-201ENSMUST00000158033 108 ntBASIC3.97□□□□□ -1.77
Msx1P13297 Gm26005-201ENSMUST00000158802 134 ntBASIC3.97□□□□□ -1.77
Msx1P13297 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC3.97□□□□□ -1.77
Msx1P13297 Gm25678-201ENSMUST00000174984 73 ntBASIC3.97□□□□□ -1.77
Msx1P13297 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC3.97□□□□□ -1.77
Msx1P13297 Gm44358-201ENSMUST00000196301 98 ntBASIC3.97□□□□□ -1.77
Msx1P13297 Sult1c2-ps2-201ENSMUST00000196414 276 ntBASIC3.97□□□□□ -1.77
Msx1P13297 Gm44308-201ENSMUST00000197080 99 ntBASIC3.97□□□□□ -1.77
Msx1P13297 Igkv8-31-201ENSMUST00000200040 372 ntBASIC3.97□□□□□ -1.77
Msx1P13297 Gm44521-201ENSMUST00000206469 217 ntBASIC3.97□□□□□ -1.77
Msx1P13297 AC154374.1-201ENSMUST00000215351 351 ntBASIC3.97□□□□□ -1.77
Msx1P13297 Gm26493-201ENSMUST00000083155 136 ntBASIC3.97□□□□□ -1.77
Msx1P13297 Gm22738-201ENSMUST00000083440 147 ntBASIC3.97□□□□□ -1.77
Msx1P13297 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC3.97□□□□□ -1.77
Msx1P13297 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC3.97□□□□□ -1.77
Msx1P13297 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Msx1P13297 Olfr1316-202ENSMUST00000213696 4184 ntAPPRIS ALT1 TSL 5 BASIC3.97□□□□□ -1.77
Msx1P13297 AC154548.1-201ENSMUST00000225844 3838 ntBASIC3.97□□□□□ -1.77
Msx1P13297 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
Msx1P13297 Svet1-201ENSMUST00000209370 3940 ntBASIC3.97□□□□□ -1.77
Msx1P13297 Gm43881-201ENSMUST00000203051 2530 ntBASIC3.96□□□□□ -1.77
Msx1P13297 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 95.2 ms