Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm22516-201ENSMUST00000158266 124 ntBASIC3.84□□□□□ -1.79
RaraP11416 Gm23197-201ENSMUST00000158809 112 ntBASIC3.84□□□□□ -1.79
RaraP11416 Gm23816-201ENSMUST00000179617 132 ntBASIC3.84□□□□□ -1.79
RaraP11416 Mpc1-ps-201ENSMUST00000181662 330 ntBASIC3.84□□□□□ -1.79
RaraP11416 Gm42988-201ENSMUST00000198116 225 ntBASIC3.84□□□□□ -1.79
RaraP11416 Gm43199-201ENSMUST00000200019 307 ntBASIC3.84□□□□□ -1.79
RaraP11416 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
RaraP11416 CT009696.2-201ENSMUST00000216668 432 ntBASIC3.84□□□□□ -1.79
RaraP11416 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
RaraP11416 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
RaraP11416 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
RaraP11416 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.8
RaraP11416 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
RaraP11416 Gm9218-201ENSMUST00000121068 2694 ntBASIC3.84□□□□□ -1.8
RaraP11416 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RaraP11416 Gm43958-201ENSMUST00000204360 3544 ntBASIC3.83□□□□□ -1.8
RaraP11416 Gm26418-201ENSMUST00000104275 137 ntBASIC3.83□□□□□ -1.8
RaraP11416 Gm23532-201ENSMUST00000104569 112 ntBASIC3.83□□□□□ -1.8
RaraP11416 Gm26249-201ENSMUST00000116708 118 ntBASIC3.83□□□□□ -1.8
RaraP11416 Gm25961-201ENSMUST00000157174 135 ntBASIC3.83□□□□□ -1.8
RaraP11416 Gm23589-201ENSMUST00000157660 105 ntBASIC3.83□□□□□ -1.8
RaraP11416 Gm22075-201ENSMUST00000158599 192 ntBASIC3.83□□□□□ -1.8
RaraP11416 Gm37791-201ENSMUST00000195081 286 ntBASIC3.83□□□□□ -1.8
RaraP11416 Mir129b-201ENSMUST00000197461 65 ntBASIC3.83□□□□□ -1.8
RaraP11416 Gm44320-201ENSMUST00000199276 86 ntBASIC3.83□□□□□ -1.8
RaraP11416 Gm19244-201ENSMUST00000204340 253 ntBASIC3.83□□□□□ -1.8
RaraP11416 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC3.83□□□□□ -1.8
RaraP11416 Snord21-201ENSMUST00000082519 94 ntBASIC3.83□□□□□ -1.8
RaraP11416 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC3.83□□□□□ -1.8
RaraP11416 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
RaraP11416 Gm37494-202ENSMUST00000188038 16021 ntTSL 5 BASIC3.83□□□□□ -1.8
RaraP11416 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.83□□□□□ -1.8
RaraP11416 Olfr354-202ENSMUST00000217479 9539 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
RaraP11416 Mir1298-201ENSMUST00000116681 98 ntBASIC3.82□□□□□ -1.8
RaraP11416 Gm13167-201ENSMUST00000118554 578 ntBASIC3.82□□□□□ -1.8
RaraP11416 Gm11334-201ENSMUST00000121969 156 ntBASIC3.82□□□□□ -1.8
RaraP11416 Gm13868-201ENSMUST00000122411 294 ntBASIC3.82□□□□□ -1.8
RaraP11416 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC3.82□□□□□ -1.8
RaraP11416 Gm13667-201ENSMUST00000132332 617 ntTSL 5 BASIC3.82□□□□□ -1.8
RaraP11416 Gm28314-201ENSMUST00000191276 345 ntBASIC3.82□□□□□ -1.8
RaraP11416 AC187103.4-202ENSMUST00000225091 230 ntBASIC3.82□□□□□ -1.8
RaraP11416 AC165415.1-201ENSMUST00000228924 273 ntBASIC3.82□□□□□ -1.8
RaraP11416 Gm10042-201ENSMUST00000079884 78 ntBASIC3.82□□□□□ -1.8
RaraP11416 Gm22443-201ENSMUST00000082890 107 ntBASIC3.82□□□□□ -1.8
RaraP11416 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
RaraP11416 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC3.82□□□□□ -1.8
RaraP11416 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
RaraP11416 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RaraP11416 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
RaraP11416 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
RaraP11416 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RaraP11416 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC3.81□□□□□ -1.8
RaraP11416 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
RaraP11416 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
RaraP11416 Mir669b-201ENSMUST00000102172 97 ntBASIC3.81□□□□□ -1.8
RaraP11416 Gm26075-201ENSMUST00000104062 121 ntBASIC3.81□□□□□ -1.8
RaraP11416 Gm24283-201ENSMUST00000104233 107 ntBASIC3.81□□□□□ -1.8
RaraP11416 Gm26145-201ENSMUST00000104476 127 ntBASIC3.81□□□□□ -1.8
RaraP11416 Gm13922-201ENSMUST00000119505 156 ntBASIC3.81□□□□□ -1.8
RaraP11416 Gm6079-201ENSMUST00000121356 404 ntBASIC3.81□□□□□ -1.8
RaraP11416 Gm12858-201ENSMUST00000121913 208 ntBASIC3.81□□□□□ -1.8
RaraP11416 Gm24440-201ENSMUST00000157236 63 ntBASIC3.81□□□□□ -1.8
RaraP11416 Gm22034-201ENSMUST00000157283 134 ntBASIC3.81□□□□□ -1.8
RaraP11416 Gm26187-201ENSMUST00000157693 101 ntBASIC3.81□□□□□ -1.8
RaraP11416 Gm24056-201ENSMUST00000158617 146 ntBASIC3.81□□□□□ -1.8
RaraP11416 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC3.81□□□□□ -1.8
RaraP11416 Gm24512-201ENSMUST00000174963 65 ntBASIC3.81□□□□□ -1.8
RaraP11416 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
RaraP11416 Gm25457-201ENSMUST00000179509 107 ntBASIC3.81□□□□□ -1.8
RaraP11416 Gm10292-201ENSMUST00000183142 581 ntBASIC3.81□□□□□ -1.8
RaraP11416 CT030159.4-201ENSMUST00000221966 395 ntBASIC3.81□□□□□ -1.8
RaraP11416 AC159885.1-201ENSMUST00000222221 199 ntBASIC3.81□□□□□ -1.8
RaraP11416 AC122418.1-201ENSMUST00000225012 511 ntBASIC3.81□□□□□ -1.8
RaraP11416 AC155167.3-201ENSMUST00000226349 217 ntBASIC3.81□□□□□ -1.8
RaraP11416 Gm25789-201ENSMUST00000083294 76 ntBASIC3.81□□□□□ -1.8
RaraP11416 Rbbp8-202ENSMUST00000115861 3523 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RaraP11416 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RaraP11416 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RaraP11416 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
RaraP11416 Gm37777-201ENSMUST00000195546 3366 ntBASIC3.8□□□□□ -1.8
RaraP11416 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
RaraP11416 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RaraP11416 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC3.8□□□□□ -1.8
RaraP11416 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
RaraP11416 Trbv13-1-201ENSMUST00000103268 334 ntAPPRIS ALT2 BASIC3.8□□□□□ -1.8
RaraP11416 Cyp4b1-ps2-201ENSMUST00000119563 333 ntBASIC3.8□□□□□ -1.8
RaraP11416 Gm12143-201ENSMUST00000119666 332 ntBASIC3.8□□□□□ -1.8
RaraP11416 Defa-ps5-201ENSMUST00000121541 279 ntBASIC3.8□□□□□ -1.8
RaraP11416 Gm22557-201ENSMUST00000157804 102 ntBASIC3.8□□□□□ -1.8
RaraP11416 Mir6399-201ENSMUST00000184050 84 ntBASIC3.8□□□□□ -1.8
RaraP11416 Gm27869-201ENSMUST00000184327 122 ntBASIC3.8□□□□□ -1.8
RaraP11416 Gm29408-201ENSMUST00000187536 216 ntBASIC3.8□□□□□ -1.8
RaraP11416 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC3.8□□□□□ -1.8
RaraP11416 CT030161.1-201ENSMUST00000218411 124 ntBASIC3.8□□□□□ -1.8
RaraP11416 AC125379.1-201ENSMUST00000221928 111 ntBASIC3.8□□□□□ -1.8
RaraP11416 AC127371.1-202ENSMUST00000228923 306 ntBASIC3.8□□□□□ -1.8
RaraP11416 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RaraP11416 Gm22299-201ENSMUST00000082663 136 ntBASIC3.8□□□□□ -1.8
RaraP11416 Gm22421-201ENSMUST00000083058 107 ntBASIC3.8□□□□□ -1.8
RaraP11416 Olfr1183-203ENSMUST00000219871 8353 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 100.5 ms