Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Hoxd3P09027 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Hoxd3P09027 AC126673.1-201ENSMUST00000223208 3856 ntBASIC3.31□□□□□ -1.88
Hoxd3P09027 AC173482.1-201ENSMUST00000224494 3815 ntBASIC3.31□□□□□ -1.88
Hoxd3P09027 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
Hoxd3P09027 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Hoxd3P09027 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
Hoxd3P09027 Hm629797-201ENSMUST00000183645 2398 ntBASIC3.31□□□□□ -1.88
Hoxd3P09027 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Hoxd3P09027 Olfr1030-201ENSMUST00000056849 4522 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Hoxd3P09027 Gm15268-201ENSMUST00000118845 352 ntBASIC3.31□□□□□ -1.88
Hoxd3P09027 Gm8200-201ENSMUST00000122390 222 ntBASIC3.31□□□□□ -1.88
Hoxd3P09027 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC3.31□□□□□ -1.88
Hoxd3P09027 Gm22516-201ENSMUST00000158266 124 ntBASIC3.31□□□□□ -1.88
Hoxd3P09027 Gm23194-201ENSMUST00000158813 105 ntBASIC3.31□□□□□ -1.88
Hoxd3P09027 Mir7667-201ENSMUST00000183866 63 ntBASIC3.31□□□□□ -1.88
Hoxd3P09027 Gm27308-201ENSMUST00000184807 233 ntBASIC3.31□□□□□ -1.88
Hoxd3P09027 AC159188.1-201ENSMUST00000225198 526 ntBASIC3.31□□□□□ -1.88
Hoxd3P09027 AC150560.2-201ENSMUST00000227208 171 ntBASIC3.31□□□□□ -1.88
Hoxd3P09027 Gm25856-201ENSMUST00000082786 75 ntBASIC3.31□□□□□ -1.88
Hoxd3P09027 Olfr575-202ENSMUST00000213477 3512 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Hoxd3P09027 Gm37792-201ENSMUST00000195761 3413 ntBASIC3.31□□□□□ -1.88
Hoxd3P09027 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Hoxd3P09027 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Hoxd3P09027 Cwf19l2-201ENSMUST00000027027 4446 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Hoxd3P09027 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC3.3□□□□□ -1.88
Hoxd3P09027 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Hoxd3P09027 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Hoxd3P09027 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Hoxd3P09027 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Hoxd3P09027 Gm24788-201ENSMUST00000104283 156 ntBASIC3.3□□□□□ -1.88
Hoxd3P09027 Gm5963-201ENSMUST00000143451 236 ntBASIC3.3□□□□□ -1.88
Hoxd3P09027 Gm25386-201ENSMUST00000157814 288 ntBASIC3.3□□□□□ -1.88
Hoxd3P09027 Gm24846-201ENSMUST00000158033 108 ntBASIC3.3□□□□□ -1.88
Hoxd3P09027 Gm23895-201ENSMUST00000158108 160 ntBASIC3.3□□□□□ -1.88
Hoxd3P09027 Gm4468-201ENSMUST00000170206 294 ntBASIC3.3□□□□□ -1.88
Hoxd3P09027 AC154297.1-201ENSMUST00000171334 397 ntBASIC3.3□□□□□ -1.88
Hoxd3P09027 Mir28b-201ENSMUST00000175399 80 ntBASIC3.3□□□□□ -1.88
Hoxd3P09027 Gm23215-201ENSMUST00000178153 121 ntBASIC3.3□□□□□ -1.88
Hoxd3P09027 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Hoxd3P09027 Gm27899-201ENSMUST00000184715 64 ntBASIC3.3□□□□□ -1.88
Hoxd3P09027 Gm29638-201ENSMUST00000186106 371 ntTSL 3 BASIC3.3□□□□□ -1.88
Hoxd3P09027 Gm44308-201ENSMUST00000197080 99 ntBASIC3.3□□□□□ -1.88
Hoxd3P09027 Gm44032-201ENSMUST00000204841 166 ntBASIC3.3□□□□□ -1.88
Hoxd3P09027 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Hoxd3P09027 n-R5s85-201ENSMUST00000083453 113 ntBASIC3.3□□□□□ -1.88
Hoxd3P09027 Mir19b-2-201ENSMUST00000083539 84 ntBASIC3.3□□□□□ -1.88
Hoxd3P09027 Gm10491-201ENSMUST00000085330 117 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Hoxd3P09027 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Hoxd3P09027 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
Hoxd3P09027 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Hoxd3P09027 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Hoxd3P09027 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Hoxd3P09027 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC3.29□□□□□ -1.88
Hoxd3P09027 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Hoxd3P09027 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Hoxd3P09027 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Hoxd3P09027 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Hoxd3P09027 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Hoxd3P09027 Adam26a-201ENSMUST00000049577 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Hoxd3P09027 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Hoxd3P09027 Gm45039-201ENSMUST00000209181 3477 ntBASIC3.29□□□□□ -1.88
Hoxd3P09027 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Hoxd3P09027 Gm14107-201ENSMUST00000117774 330 ntBASIC3.29□□□□□ -1.88
Hoxd3P09027 Gm13687-201ENSMUST00000119857 282 ntBASIC3.29□□□□□ -1.88
Hoxd3P09027 Gm13868-201ENSMUST00000122411 294 ntBASIC3.29□□□□□ -1.88
Hoxd3P09027 Gm23554-201ENSMUST00000157818 110 ntBASIC3.29□□□□□ -1.88
Hoxd3P09027 Gm23559-201ENSMUST00000157824 103 ntBASIC3.29□□□□□ -1.88
Hoxd3P09027 Gm28912-201ENSMUST00000189001 234 ntBASIC3.29□□□□□ -1.88
Hoxd3P09027 Ighv1-28-201ENSMUST00000192987 351 ntBASIC3.29□□□□□ -1.88
Hoxd3P09027 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC3.29□□□□□ -1.88
Hoxd3P09027 AC161054.1-201ENSMUST00000214319 184 ntBASIC3.29□□□□□ -1.88
Hoxd3P09027 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Hoxd3P09027 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Hoxd3P09027 AC124524.1-201ENSMUST00000225833 181 ntBASIC3.29□□□□□ -1.88
Hoxd3P09027 AC134860.6-201ENSMUST00000226038 285 ntBASIC3.29□□□□□ -1.88
Hoxd3P09027 Gm16976-205ENSMUST00000227324 226 ntBASIC3.29□□□□□ -1.88
Hoxd3P09027 AC183096.2-201ENSMUST00000228733 457 ntBASIC3.29□□□□□ -1.88
Hoxd3P09027 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Hoxd3P09027 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Hoxd3P09027 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Hoxd3P09027 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
Hoxd3P09027 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Hoxd3P09027 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Hoxd3P09027 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Hoxd3P09027 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Hoxd3P09027 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
Hoxd3P09027 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Hoxd3P09027 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Hoxd3P09027 Gm22758-201ENSMUST00000102275 96 ntBASIC3.28□□□□□ -1.88
Hoxd3P09027 Mir92b-201ENSMUST00000102300 83 ntBASIC3.28□□□□□ -1.88
Hoxd3P09027 Gm23063-201ENSMUST00000102350 93 ntBASIC3.28□□□□□ -1.88
Hoxd3P09027 Gm13386-201ENSMUST00000117677 124 ntBASIC3.28□□□□□ -1.88
Hoxd3P09027 Gm14602-201ENSMUST00000118625 340 ntBASIC3.28□□□□□ -1.88
Hoxd3P09027 Gm25908-201ENSMUST00000157624 98 ntBASIC3.28□□□□□ -1.88
Hoxd3P09027 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Hoxd3P09027 Snord50a-201ENSMUST00000178154 72 ntBASIC3.28□□□□□ -1.88
Hoxd3P09027 Gm24463-201ENSMUST00000178417 72 ntBASIC3.28□□□□□ -1.88
Hoxd3P09027 Gm27718-201ENSMUST00000183721 86 ntBASIC3.28□□□□□ -1.88
Hoxd3P09027 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC3.28□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms