Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 Gm23836-201ENSMUST00000104434 129 ntBASIC2.71□□□□□ -1.97
Col3a1P08121 Gm24586-201ENSMUST00000116695 89 ntBASIC2.71□□□□□ -1.97
Col3a1P08121 Gm13876-201ENSMUST00000118451 261 ntBASIC2.71□□□□□ -1.97
Col3a1P08121 Gm12647-201ENSMUST00000118977 265 ntBASIC2.71□□□□□ -1.97
Col3a1P08121 n-R5s80-201ENSMUST00000122596 111 ntBASIC2.71□□□□□ -1.97
Col3a1P08121 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
Col3a1P08121 Gm24601-201ENSMUST00000157970 143 ntBASIC2.71□□□□□ -1.97
Col3a1P08121 Gm24191-201ENSMUST00000157977 122 ntBASIC2.71□□□□□ -1.97
Col3a1P08121 Gm25333-201ENSMUST00000158035 246 ntBASIC2.71□□□□□ -1.97
Col3a1P08121 Gm22389-201ENSMUST00000158193 301 ntBASIC2.71□□□□□ -1.97
Col3a1P08121 Gm22517-201ENSMUST00000158265 136 ntBASIC2.71□□□□□ -1.97
Col3a1P08121 Gm22433-201ENSMUST00000158550 142 ntBASIC2.71□□□□□ -1.97
Col3a1P08121 Gm22947-201ENSMUST00000158559 91 ntBASIC2.71□□□□□ -1.97
Col3a1P08121 Gm23005-201ENSMUST00000158950 136 ntBASIC2.71□□□□□ -1.97
Col3a1P08121 Gm22192-201ENSMUST00000175128 85 ntBASIC2.71□□□□□ -1.97
Col3a1P08121 Gm26189-201ENSMUST00000179879 107 ntBASIC2.71□□□□□ -1.97
Col3a1P08121 Gm27997-201ENSMUST00000184942 69 ntBASIC2.71□□□□□ -1.97
Col3a1P08121 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC2.71□□□□□ -1.97
Col3a1P08121 Gm29352-201ENSMUST00000188054 544 ntBASIC2.71□□□□□ -1.97
Col3a1P08121 Gm37568-201ENSMUST00000191755 364 ntBASIC2.71□□□□□ -1.97
Col3a1P08121 Gm30341-201ENSMUST00000194363 289 ntBASIC2.71□□□□□ -1.97
Col3a1P08121 Gm44425-201ENSMUST00000203739 429 ntBASIC2.71□□□□□ -1.97
Col3a1P08121 Gm25632-201ENSMUST00000083112 85 ntBASIC2.71□□□□□ -1.97
Col3a1P08121 Gm26497-201ENSMUST00000083146 107 ntBASIC2.71□□□□□ -1.97
Col3a1P08121 Mir452-201ENSMUST00000093629 85 ntBASIC2.71□□□□□ -1.97
Col3a1P08121 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Col3a1P08121 CT009510.2-203ENSMUST00000226704 2136 ntBASIC2.71□□□□□ -1.98
Col3a1P08121 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
Col3a1P08121 Gm38211-201ENSMUST00000192814 7217 ntBASIC2.71□□□□□ -1.98
Col3a1P08121 Mir758-201ENSMUST00000103260 81 ntBASIC2.71□□□□□ -1.98
Col3a1P08121 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
Col3a1P08121 n-R5s202-201ENSMUST00000104517 114 ntBASIC2.71□□□□□ -1.98
Col3a1P08121 Gm2066-201ENSMUST00000118046 389 ntBASIC2.71□□□□□ -1.98
Col3a1P08121 Gm14841-201ENSMUST00000121067 758 ntBASIC2.71□□□□□ -1.98
Col3a1P08121 Trav20-201ENSMUST00000142754 347 ntBASIC2.71□□□□□ -1.98
Col3a1P08121 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC2.71□□□□□ -1.98
Col3a1P08121 Gm26412-201ENSMUST00000157666 55 ntBASIC2.71□□□□□ -1.98
Col3a1P08121 Gm22551-201ENSMUST00000157795 103 ntBASIC2.71□□□□□ -1.98
Col3a1P08121 Gm23759-201ENSMUST00000158351 268 ntBASIC2.71□□□□□ -1.98
Col3a1P08121 Gm22416-201ENSMUST00000158590 88 ntBASIC2.71□□□□□ -1.98
Col3a1P08121 Gm25119-201ENSMUST00000158815 88 ntBASIC2.71□□□□□ -1.98
Col3a1P08121 Gm27898-201ENSMUST00000183987 80 ntBASIC2.71□□□□□ -1.98
Col3a1P08121 Gm28921-201ENSMUST00000190219 378 ntBASIC2.71□□□□□ -1.98
Col3a1P08121 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
Col3a1P08121 Gm37801-201ENSMUST00000194754 274 ntBASIC2.71□□□□□ -1.98
Col3a1P08121 Igkv4-65-201ENSMUST00000196986 358 ntBASIC2.71□□□□□ -1.98
Col3a1P08121 Gm44703-201ENSMUST00000205724 248 ntBASIC2.71□□□□□ -1.98
Col3a1P08121 Gm44859-201ENSMUST00000207831 94 ntBASIC2.71□□□□□ -1.98
Col3a1P08121 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.71□□□□□ -1.98
Col3a1P08121 AC133934.2-201ENSMUST00000221729 4129 ntBASIC2.7□□□□□ -1.98
Col3a1P08121 Mir592-201ENSMUST00000102113 96 ntBASIC2.7□□□□□ -1.98
Col3a1P08121 Mir743b-201ENSMUST00000104751 77 ntBASIC2.7□□□□□ -1.98
Col3a1P08121 Gm13967-201ENSMUST00000120404 380 ntBASIC2.7□□□□□ -1.98
Col3a1P08121 Gm11384-201ENSMUST00000121376 303 ntBASIC2.7□□□□□ -1.98
Col3a1P08121 Gm13868-201ENSMUST00000122411 294 ntBASIC2.7□□□□□ -1.98
Col3a1P08121 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC2.7□□□□□ -1.98
Col3a1P08121 Gm25910-201ENSMUST00000157620 140 ntBASIC2.7□□□□□ -1.98
Col3a1P08121 Gm17065-201ENSMUST00000165245 239 ntBASIC2.7□□□□□ -1.98
Col3a1P08121 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC2.7□□□□□ -1.98
Col3a1P08121 Gm22114-201ENSMUST00000177756 107 ntBASIC2.7□□□□□ -1.98
Col3a1P08121 Gm24968-201ENSMUST00000179817 107 ntBASIC2.7□□□□□ -1.98
Col3a1P08121 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC2.7□□□□□ -1.98
Col3a1P08121 Gm44977-201ENSMUST00000205283 420 ntBASIC2.7□□□□□ -1.98
Col3a1P08121 Gm19790-201ENSMUST00000214414 251 ntBASIC2.7□□□□□ -1.98
Col3a1P08121 AC154603.1-201ENSMUST00000224355 313 ntBASIC2.7□□□□□ -1.98
Col3a1P08121 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC2.69□□□□□ -1.98
Col3a1P08121 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Col3a1P08121 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC2.69□□□□□ -1.98
Col3a1P08121 Gm23422-201ENSMUST00000102000 107 ntBASIC2.69□□□□□ -1.98
Col3a1P08121 Gm12495-201ENSMUST00000119750 447 ntBASIC2.69□□□□□ -1.98
Col3a1P08121 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC2.69□□□□□ -1.98
Col3a1P08121 Mir669n-201ENSMUST00000158636 54 ntBASIC2.69□□□□□ -1.98
Col3a1P08121 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Col3a1P08121 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC2.69□□□□□ -1.98
Col3a1P08121 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC2.69□□□□□ -1.98
Col3a1P08121 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC2.69□□□□□ -1.98
Col3a1P08121 Gm28288-201ENSMUST00000191019 214 ntBASIC2.69□□□□□ -1.98
Col3a1P08121 Mir3069-201ENSMUST00000198802 65 ntBASIC2.69□□□□□ -1.98
Col3a1P08121 Olfr210-ps1-201ENSMUST00000203138 905 ntBASIC2.69□□□□□ -1.98
Col3a1P08121 AC163357.1-201ENSMUST00000220847 233 ntBASIC2.69□□□□□ -1.98
Col3a1P08121 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.69□□□□□ -1.98
Col3a1P08121 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Col3a1P08121 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC2.69□□□□□ -1.98
Col3a1P08121 Gm36960-201ENSMUST00000195491 2035 ntBASIC2.68□□□□□ -1.98
Col3a1P08121 Gm44230-201ENSMUST00000203032 3550 ntBASIC2.68□□□□□ -1.98
Col3a1P08121 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Col3a1P08121 Mir881-201ENSMUST00000104844 78 ntBASIC2.68□□□□□ -1.98
Col3a1P08121 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Col3a1P08121 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC2.68□□□□□ -1.98
Col3a1P08121 Gm15807-201ENSMUST00000119880 1128 ntBASIC2.68□□□□□ -1.98
Col3a1P08121 Gm13396-201ENSMUST00000120617 271 ntBASIC2.68□□□□□ -1.98
Col3a1P08121 Gm22814-201ENSMUST00000157452 104 ntBASIC2.68□□□□□ -1.98
Col3a1P08121 Mir7225-201ENSMUST00000184178 54 ntBASIC2.68□□□□□ -1.98
Col3a1P08121 Igkv13-64-201ENSMUST00000198143 343 ntBASIC2.68□□□□□ -1.98
Col3a1P08121 Gm43427-201ENSMUST00000198188 331 ntBASIC2.68□□□□□ -1.98
Col3a1P08121 Gm44408-201ENSMUST00000200205 66 ntBASIC2.68□□□□□ -1.98
Col3a1P08121 Gm45859-201ENSMUST00000212794 214 ntBASIC2.68□□□□□ -1.98
Col3a1P08121 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Col3a1P08121 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
Col3a1P08121 Gm23142-201ENSMUST00000101848 105 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms