Protein–RNA interactions for Protein: O88834

Shd, SH2 domain-containing adapter protein D, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShdO88834 Gm24958-201ENSMUST00000158009 97 ntBASIC2.78□□□□□ -1.96
ShdO88834 Gm22447-201ENSMUST00000158155 92 ntBASIC2.78□□□□□ -1.96
ShdO88834 Gm24726-201ENSMUST00000158232 121 ntBASIC2.78□□□□□ -1.96
ShdO88834 Gm22945-201ENSMUST00000158557 157 ntBASIC2.78□□□□□ -1.96
ShdO88834 Gm17065-201ENSMUST00000165245 239 ntBASIC2.78□□□□□ -1.96
ShdO88834 Gm22192-201ENSMUST00000175128 85 ntBASIC2.78□□□□□ -1.96
ShdO88834 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
ShdO88834 Gm27330-201ENSMUST00000184689 132 ntBASIC2.78□□□□□ -1.96
ShdO88834 Gm43521-201ENSMUST00000197838 255 ntBASIC2.78□□□□□ -1.96
ShdO88834 Gm43107-201ENSMUST00000198729 255 ntBASIC2.78□□□□□ -1.96
ShdO88834 Gm43914-201ENSMUST00000203592 594 ntBASIC2.78□□□□□ -1.96
ShdO88834 Gm44425-201ENSMUST00000203739 429 ntBASIC2.78□□□□□ -1.96
ShdO88834 Gm44794-201ENSMUST00000206550 411 ntBASIC2.78□□□□□ -1.96
ShdO88834 AC154271.1-201ENSMUST00000224780 383 ntBASIC2.78□□□□□ -1.96
ShdO88834 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
ShdO88834 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
ShdO88834 Gm24460-201ENSMUST00000082731 106 ntBASIC2.78□□□□□ -1.96
ShdO88834 Gm25632-201ENSMUST00000083112 85 ntBASIC2.78□□□□□ -1.96
ShdO88834 Mir133a-1-201ENSMUST00000083465 68 ntBASIC2.78□□□□□ -1.96
ShdO88834 AC154386.1-201ENSMUST00000222753 2871 ntBASIC2.78□□□□□ -1.97
ShdO88834 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
ShdO88834 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
ShdO88834 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
ShdO88834 Gm25526-201ENSMUST00000104332 132 ntBASIC2.77□□□□□ -1.97
ShdO88834 n-R5s26-201ENSMUST00000104601 122 ntBASIC2.77□□□□□ -1.97
ShdO88834 Gm6954-201ENSMUST00000117416 225 ntBASIC2.77□□□□□ -1.97
ShdO88834 Gm11322-201ENSMUST00000118095 435 ntBASIC2.77□□□□□ -1.97
ShdO88834 Gm5396-201ENSMUST00000121222 532 ntBASIC2.77□□□□□ -1.97
ShdO88834 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC2.77□□□□□ -1.97
ShdO88834 Gm23190-201ENSMUST00000180307 64 ntBASIC2.77□□□□□ -1.97
ShdO88834 Mir7242-201ENSMUST00000183710 79 ntBASIC2.77□□□□□ -1.97
ShdO88834 Gm29553-201ENSMUST00000189692 279 ntBASIC2.77□□□□□ -1.97
ShdO88834 Gm42439-201ENSMUST00000195931 486 ntTSL 3 BASIC2.77□□□□□ -1.97
ShdO88834 Gm44429-201ENSMUST00000203542 186 ntBASIC2.77□□□□□ -1.97
ShdO88834 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC2.77□□□□□ -1.97
ShdO88834 AC155712.1-201ENSMUST00000219704 160 ntBASIC2.77□□□□□ -1.97
ShdO88834 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
ShdO88834 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC2.77□□□□□ -1.97
ShdO88834 AC125223.1-203ENSMUST00000225304 498 ntBASIC2.77□□□□□ -1.97
ShdO88834 AC133156.1-202ENSMUST00000227284 363 ntBASIC2.77□□□□□ -1.97
ShdO88834 AC163295.1-201ENSMUST00000227840 314 ntBASIC2.77□□□□□ -1.97
ShdO88834 Gm24764-201ENSMUST00000083686 199 ntBASIC2.77□□□□□ -1.97
ShdO88834 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
ShdO88834 Gm37061-201ENSMUST00000195066 3243 ntBASIC2.77□□□□□ -1.97
ShdO88834 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC2.76□□□□□ -1.97
ShdO88834 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC2.76□□□□□ -1.97
ShdO88834 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC2.76□□□□□ -1.97
ShdO88834 Gm14602-201ENSMUST00000118625 340 ntBASIC2.76□□□□□ -1.97
ShdO88834 Gm13432-201ENSMUST00000118861 241 ntBASIC2.76□□□□□ -1.97
ShdO88834 Gm23759-201ENSMUST00000158351 268 ntBASIC2.76□□□□□ -1.97
ShdO88834 Gm24082-201ENSMUST00000175175 83 ntBASIC2.76□□□□□ -1.97
ShdO88834 Gm23268-201ENSMUST00000175494 78 ntBASIC2.76□□□□□ -1.97
ShdO88834 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC2.76□□□□□ -1.97
ShdO88834 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC2.76□□□□□ -1.97
ShdO88834 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC2.76□□□□□ -1.97
ShdO88834 AC174457.1-201ENSMUST00000215932 226 ntBASIC2.76□□□□□ -1.97
ShdO88834 AC100209.2-201ENSMUST00000224461 451 ntBASIC2.76□□□□□ -1.97
ShdO88834 Gm26458-201ENSMUST00000082832 128 ntBASIC2.76□□□□□ -1.97
ShdO88834 Gm23264-201ENSMUST00000083372 107 ntBASIC2.76□□□□□ -1.97
ShdO88834 Gm24817-201ENSMUST00000093672 105 ntBASIC2.76□□□□□ -1.97
ShdO88834 AC157570.1-201ENSMUST00000218052 3778 ntBASIC2.76□□□□□ -1.97
ShdO88834 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC2.76□□□□□ -1.97
ShdO88834 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
ShdO88834 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
ShdO88834 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
ShdO88834 Snord11-201ENSMUST00000158468 84 ntBASIC2.75□□□□□ -1.97
ShdO88834 Gm27786-201ENSMUST00000184337 70 ntBASIC2.75□□□□□ -1.97
ShdO88834 Gm27505-201ENSMUST00000185071 110 ntBASIC2.75□□□□□ -1.97
ShdO88834 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC2.75□□□□□ -1.97
ShdO88834 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC2.75□□□□□ -1.97
ShdO88834 Gm6030-201ENSMUST00000078768 402 ntBASIC2.75□□□□□ -1.97
ShdO88834 Gm24152-201ENSMUST00000082764 163 ntBASIC2.75□□□□□ -1.97
ShdO88834 Gm23378-201ENSMUST00000082942 107 ntBASIC2.75□□□□□ -1.97
ShdO88834 Gm23731-201ENSMUST00000083749 107 ntBASIC2.75□□□□□ -1.97
ShdO88834 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
ShdO88834 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
ShdO88834 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC2.75□□□□□ -1.97
ShdO88834 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.74□□□□□ -1.97
ShdO88834 AC121844.2-201ENSMUST00000219067 2066 ntBASIC2.74□□□□□ -1.97
ShdO88834 Gm11285-201ENSMUST00000118443 322 ntBASIC2.74□□□□□ -1.97
ShdO88834 Gm12235-201ENSMUST00000118596 170 ntBASIC2.74□□□□□ -1.97
ShdO88834 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC2.74□□□□□ -1.97
ShdO88834 Gm24348-201ENSMUST00000158710 130 ntBASIC2.74□□□□□ -1.97
ShdO88834 Gm20660-201ENSMUST00000177515 289 ntBASIC2.74□□□□□ -1.97
ShdO88834 Gm24388-201ENSMUST00000177872 107 ntBASIC2.74□□□□□ -1.97
ShdO88834 Gm25528-201ENSMUST00000180264 132 ntBASIC2.74□□□□□ -1.97
ShdO88834 Mir6916-201ENSMUST00000184514 63 ntBASIC2.74□□□□□ -1.97
ShdO88834 Gm29665-201ENSMUST00000191457 528 ntBASIC2.74□□□□□ -1.97
ShdO88834 Gm34314-201ENSMUST00000203622 367 ntBASIC2.74□□□□□ -1.97
ShdO88834 Gm44478-201ENSMUST00000204875 114 ntBASIC2.74□□□□□ -1.97
ShdO88834 AC129202.2-201ENSMUST00000225123 177 ntBASIC2.74□□□□□ -1.97
ShdO88834 CT030182.3-201ENSMUST00000225986 582 ntBASIC2.74□□□□□ -1.97
ShdO88834 Mucl2-201ENSMUST00000037685 639 ntAPPRIS P2 TSL 1 (best) BASIC2.74□□□□□ -1.97
ShdO88834 n-R5s40-201ENSMUST00000082475 124 ntBASIC2.74□□□□□ -1.97
ShdO88834 Gm26265-201ENSMUST00000083277 135 ntBASIC2.74□□□□□ -1.97
ShdO88834 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
ShdO88834 Pak3-205ENSMUST00000112868 8163 ntAPPRIS P3 TSL 5 BASIC2.74□□□□□ -1.97
ShdO88834 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.74□□□□□ -1.97
ShdO88834 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
ShdO88834 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 343.4 ms