Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Hcn3O88705 Gm23589-201ENSMUST00000157660 105 ntBASIC2.79□□□□□ -1.96
Hcn3O88705 Gm20672-201ENSMUST00000176605 261 ntBASIC2.79□□□□□ -1.96
Hcn3O88705 Gm24308-201ENSMUST00000177773 114 ntBASIC2.79□□□□□ -1.96
Hcn3O88705 Gm24799-201ENSMUST00000178431 79 ntBASIC2.79□□□□□ -1.96
Hcn3O88705 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC2.79□□□□□ -1.96
Hcn3O88705 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC2.79□□□□□ -1.96
Hcn3O88705 Gm37713-201ENSMUST00000191746 198 ntBASIC2.79□□□□□ -1.96
Hcn3O88705 Gm37449-201ENSMUST00000193016 270 ntBASIC2.79□□□□□ -1.96
Hcn3O88705 Gm18658-201ENSMUST00000195558 270 ntBASIC2.79□□□□□ -1.96
Hcn3O88705 Gm43978-201ENSMUST00000203491 451 ntBASIC2.79□□□□□ -1.96
Hcn3O88705 Gm43932-201ENSMUST00000204499 52 ntBASIC2.79□□□□□ -1.96
Hcn3O88705 Gm44655-201ENSMUST00000207768 423 ntBASIC2.79□□□□□ -1.96
Hcn3O88705 AC158798.1-201ENSMUST00000219714 711 ntTSL 5 BASIC2.79□□□□□ -1.96
Hcn3O88705 AC129017.1-201ENSMUST00000228363 270 ntBASIC2.79□□□□□ -1.96
Hcn3O88705 Gm6030-201ENSMUST00000078768 402 ntBASIC2.79□□□□□ -1.96
Hcn3O88705 Gm23462-201ENSMUST00000083264 104 ntBASIC2.79□□□□□ -1.96
Hcn3O88705 Mir29b-2-201ENSMUST00000083478 81 ntBASIC2.79□□□□□ -1.96
Hcn3O88705 AF357428-201ENSMUST00000083815 69 ntBASIC2.79□□□□□ -1.96
Hcn3O88705 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Hcn3O88705 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Hcn3O88705 Mir499-201ENSMUST00000102357 79 ntBASIC2.78□□□□□ -1.96
Hcn3O88705 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Hcn3O88705 Gm13432-201ENSMUST00000118861 241 ntBASIC2.78□□□□□ -1.96
Hcn3O88705 Gm25543-201ENSMUST00000122678 312 ntBASIC2.78□□□□□ -1.96
Hcn3O88705 Gm24858-201ENSMUST00000158058 323 ntBASIC2.78□□□□□ -1.96
Hcn3O88705 Gm22416-201ENSMUST00000158590 88 ntBASIC2.78□□□□□ -1.96
Hcn3O88705 Gm25119-201ENSMUST00000158815 88 ntBASIC2.78□□□□□ -1.96
Hcn3O88705 Gm23355-201ENSMUST00000177614 107 ntBASIC2.78□□□□□ -1.96
Hcn3O88705 Gm23148-201ENSMUST00000180367 107 ntBASIC2.78□□□□□ -1.96
Hcn3O88705 Mir6375-201ENSMUST00000197176 95 ntBASIC2.78□□□□□ -1.96
Hcn3O88705 Gm44409-201ENSMUST00000198810 166 ntBASIC2.78□□□□□ -1.96
Hcn3O88705 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC2.78□□□□□ -1.96
Hcn3O88705 AC157352.1-201ENSMUST00000222762 303 ntTSL 5 BASIC2.78□□□□□ -1.96
Hcn3O88705 AC100209.2-201ENSMUST00000224461 451 ntBASIC2.78□□□□□ -1.96
Hcn3O88705 Gm25258-201ENSMUST00000083049 107 ntBASIC2.78□□□□□ -1.96
Hcn3O88705 Gm43300-201ENSMUST00000198540 2043 ntBASIC2.78□□□□□ -1.96
Hcn3O88705 AC153526.2-201ENSMUST00000218206 2031 ntBASIC2.78□□□□□ -1.96
Hcn3O88705 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Hcn3O88705 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Hcn3O88705 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC2.77□□□□□ -1.97
Hcn3O88705 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC2.77□□□□□ -1.97
Hcn3O88705 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC2.77□□□□□ -1.97
Hcn3O88705 Gm22497-201ENSMUST00000104499 131 ntBASIC2.77□□□□□ -1.97
Hcn3O88705 Gm14843-201ENSMUST00000119596 212 ntBASIC2.77□□□□□ -1.97
Hcn3O88705 Gm12304-201ENSMUST00000120312 385 ntBASIC2.77□□□□□ -1.97
Hcn3O88705 Gm24730-201ENSMUST00000158228 117 ntBASIC2.77□□□□□ -1.97
Hcn3O88705 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC2.77□□□□□ -1.97
Hcn3O88705 Gm25450-201ENSMUST00000179144 107 ntBASIC2.77□□□□□ -1.97
Hcn3O88705 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Hcn3O88705 Gm43746-201ENSMUST00000200028 317 ntBASIC2.77□□□□□ -1.97
Hcn3O88705 Gm9967-203ENSMUST00000206903 408 ntTSL 3 BASIC2.77□□□□□ -1.97
Hcn3O88705 Gm45313-201ENSMUST00000210584 178 ntBASIC2.77□□□□□ -1.97
Hcn3O88705 AC188459.1-201ENSMUST00000216651 300 ntBASIC2.77□□□□□ -1.97
Hcn3O88705 Gm10226-201ENSMUST00000072133 255 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Hcn3O88705 Gm24316-201ENSMUST00000083041 107 ntBASIC2.77□□□□□ -1.97
Hcn3O88705 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Hcn3O88705 Vmn1r13-203ENSMUST00000227298 5203 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Hcn3O88705 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
Hcn3O88705 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Hcn3O88705 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Hcn3O88705 Gm42639-201ENSMUST00000197061 1871 ntBASIC2.76□□□□□ -1.97
Hcn3O88705 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Hcn3O88705 Gm24982-201ENSMUST00000104456 132 ntBASIC2.76□□□□□ -1.97
Hcn3O88705 Gm26341-201ENSMUST00000104561 134 ntBASIC2.76□□□□□ -1.97
Hcn3O88705 Mir872-201ENSMUST00000104728 81 ntBASIC2.76□□□□□ -1.97
Hcn3O88705 Mir669g-201ENSMUST00000116809 123 ntBASIC2.76□□□□□ -1.97
Hcn3O88705 Gm26156-201ENSMUST00000116999 123 ntBASIC2.76□□□□□ -1.97
Hcn3O88705 Gm14973-201ENSMUST00000117248 255 ntBASIC2.76□□□□□ -1.97
Hcn3O88705 Gm24138-201ENSMUST00000157572 114 ntBASIC2.76□□□□□ -1.97
Hcn3O88705 Gm23474-201ENSMUST00000158884 75 ntBASIC2.76□□□□□ -1.97
Hcn3O88705 Ear-ps8-201ENSMUST00000161935 354 ntBASIC2.76□□□□□ -1.97
Hcn3O88705 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC2.76□□□□□ -1.97
Hcn3O88705 Gm26200-201ENSMUST00000180273 79 ntBASIC2.76□□□□□ -1.97
Hcn3O88705 Gm27761-201ENSMUST00000184091 131 ntBASIC2.76□□□□□ -1.97
Hcn3O88705 Gm18357-201ENSMUST00000188184 580 ntBASIC2.76□□□□□ -1.97
Hcn3O88705 Gm28744-201ENSMUST00000189939 340 ntBASIC2.76□□□□□ -1.97
Hcn3O88705 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Hcn3O88705 Igkv11-118-201ENSMUST00000199448 346 ntBASIC2.76□□□□□ -1.97
Hcn3O88705 Gm44055-201ENSMUST00000204376 247 ntBASIC2.76□□□□□ -1.97
Hcn3O88705 Gm44903-201ENSMUST00000206840 130 ntBASIC2.76□□□□□ -1.97
Hcn3O88705 Gm44594-201ENSMUST00000208982 407 ntBASIC2.76□□□□□ -1.97
Hcn3O88705 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Hcn3O88705 Gm25141-201ENSMUST00000083177 107 ntBASIC2.76□□□□□ -1.97
Hcn3O88705 Gm23040-201ENSMUST00000083869 163 ntBASIC2.76□□□□□ -1.97
Hcn3O88705 Gm37061-201ENSMUST00000195066 3243 ntBASIC2.76□□□□□ -1.97
Hcn3O88705 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Hcn3O88705 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.75□□□□□ -1.97
Hcn3O88705 Gm25526-201ENSMUST00000104332 132 ntBASIC2.75□□□□□ -1.97
Hcn3O88705 Gm11285-201ENSMUST00000118443 322 ntBASIC2.75□□□□□ -1.97
Hcn3O88705 Gm12646-201ENSMUST00000119144 238 ntBASIC2.75□□□□□ -1.97
Hcn3O88705 Gm11572-201ENSMUST00000119164 120 ntBASIC2.75□□□□□ -1.97
Hcn3O88705 Gm13967-201ENSMUST00000120404 380 ntBASIC2.75□□□□□ -1.97
Hcn3O88705 Gm5396-201ENSMUST00000121222 532 ntBASIC2.75□□□□□ -1.97
Hcn3O88705 Gm15213-201ENSMUST00000122098 216 ntBASIC2.75□□□□□ -1.97
Hcn3O88705 Gm14770-201ENSMUST00000122197 312 ntBASIC2.75□□□□□ -1.97
Hcn3O88705 Gm24385-201ENSMUST00000122694 350 ntBASIC2.75□□□□□ -1.97
Hcn3O88705 Gm24892-201ENSMUST00000122747 104 ntBASIC2.75□□□□□ -1.97
Hcn3O88705 Gm24629-201ENSMUST00000122762 89 ntBASIC2.75□□□□□ -1.97
Hcn3O88705 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC2.75□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 102 ms