Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Cldn5O54942 Mir7118-201ENSMUST00000197760 61 ntBASIC2.15□□□□□ -2.07
Cldn5O54942 Gm42807-201ENSMUST00000200141 329 ntBASIC2.15□□□□□ -2.07
Cldn5O54942 Gm45315-201ENSMUST00000209283 333 ntBASIC2.15□□□□□ -2.07
Cldn5O54942 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Cldn5O54942 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.15□□□□□ -2.07
Cldn5O54942 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
Cldn5O54942 Gm22062-201ENSMUST00000082563 107 ntBASIC2.15□□□□□ -2.07
Cldn5O54942 Gm24044-201ENSMUST00000083107 156 ntBASIC2.15□□□□□ -2.07
Cldn5O54942 Gm23453-201ENSMUST00000083326 106 ntBASIC2.15□□□□□ -2.07
Cldn5O54942 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.15□□□□□ -2.07
Cldn5O54942 Gm12721-201ENSMUST00000120621 268 ntBASIC2.14□□□□□ -2.07
Cldn5O54942 Gm14287-201ENSMUST00000121060 117 ntBASIC2.14□□□□□ -2.07
Cldn5O54942 Gm12617-201ENSMUST00000121268 381 ntBASIC2.14□□□□□ -2.07
Cldn5O54942 Gm23342-201ENSMUST00000158958 115 ntBASIC2.14□□□□□ -2.07
Cldn5O54942 Mir28b-201ENSMUST00000175399 80 ntBASIC2.14□□□□□ -2.07
Cldn5O54942 Gm22800-201ENSMUST00000175627 94 ntBASIC2.14□□□□□ -2.07
Cldn5O54942 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
Cldn5O54942 Mir7014-201ENSMUST00000183853 63 ntBASIC2.14□□□□□ -2.07
Cldn5O54942 Gm27588-201ENSMUST00000185096 263 ntBASIC2.14□□□□□ -2.07
Cldn5O54942 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC2.14□□□□□ -2.07
Cldn5O54942 Gm44726-201ENSMUST00000203427 217 ntBASIC2.14□□□□□ -2.07
Cldn5O54942 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC2.14□□□□□ -2.07
Cldn5O54942 Gm18453-201ENSMUST00000208000 626 ntBASIC2.14□□□□□ -2.07
Cldn5O54942 Gm2829-201ENSMUST00000213121 499 ntBASIC2.14□□□□□ -2.07
Cldn5O54942 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC2.14□□□□□ -2.07
Cldn5O54942 AC159709.1-201ENSMUST00000220445 349 ntBASIC2.14□□□□□ -2.07
Cldn5O54942 Gm23462-201ENSMUST00000083264 104 ntBASIC2.14□□□□□ -2.07
Cldn5O54942 Snora69-201ENSMUST00000083708 131 ntBASIC2.14□□□□□ -2.07
Cldn5O54942 Gm25651-201ENSMUST00000083782 119 ntBASIC2.14□□□□□ -2.07
Cldn5O54942 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC2.14□□□□□ -2.07
Cldn5O54942 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC2.14□□□□□ -2.07
Cldn5O54942 Gm13475-201ENSMUST00000119290 234 ntBASIC2.13□□□□□ -2.07
Cldn5O54942 Gm5396-201ENSMUST00000121222 532 ntBASIC2.13□□□□□ -2.07
Cldn5O54942 n-R5s159-201ENSMUST00000122681 120 ntBASIC2.13□□□□□ -2.07
Cldn5O54942 Gm23589-201ENSMUST00000157660 105 ntBASIC2.13□□□□□ -2.07
Cldn5O54942 Gm22136-201ENSMUST00000158751 268 ntBASIC2.13□□□□□ -2.07
Cldn5O54942 Gm25933-201ENSMUST00000178943 108 ntBASIC2.13□□□□□ -2.07
Cldn5O54942 Mir6901-201ENSMUST00000185062 62 ntBASIC2.13□□□□□ -2.07
Cldn5O54942 Gm42672-201ENSMUST00000197821 352 ntBASIC2.13□□□□□ -2.07
Cldn5O54942 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC2.13□□□□□ -2.07
Cldn5O54942 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC2.13□□□□□ -2.07
Cldn5O54942 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC2.13□□□□□ -2.07
Cldn5O54942 CT025526.1-201ENSMUST00000217327 267 ntBASIC2.13□□□□□ -2.07
Cldn5O54942 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
Cldn5O54942 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
Cldn5O54942 Gm24623-201ENSMUST00000082616 194 ntBASIC2.13□□□□□ -2.07
Cldn5O54942 Gm26066-201ENSMUST00000083385 109 ntBASIC2.13□□□□□ -2.07
Cldn5O54942 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Cldn5O54942 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.13□□□□□ -2.07
Cldn5O54942 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Cldn5O54942 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
Cldn5O54942 AL645643.1-201ENSMUST00000222438 3897 ntBASIC2.13□□□□□ -2.07
Cldn5O54942 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC2.12□□□□□ -2.07
Cldn5O54942 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
Cldn5O54942 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC2.12□□□□□ -2.07
Cldn5O54942 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC2.12□□□□□ -2.07
Cldn5O54942 Gm15010-201ENSMUST00000117153 407 ntBASIC2.12□□□□□ -2.07
Cldn5O54942 Gm6444-201ENSMUST00000119611 458 ntBASIC2.12□□□□□ -2.07
Cldn5O54942 Gm14588-201ENSMUST00000119895 172 ntBASIC2.12□□□□□ -2.07
Cldn5O54942 Gm22037-201ENSMUST00000157280 296 ntBASIC2.12□□□□□ -2.07
Cldn5O54942 Gm22727-201ENSMUST00000158090 116 ntBASIC2.12□□□□□ -2.07
Cldn5O54942 Gm25368-201ENSMUST00000158847 131 ntBASIC2.12□□□□□ -2.07
Cldn5O54942 Gm21737-201ENSMUST00000178112 664 ntBASIC2.12□□□□□ -2.07
Cldn5O54942 Gm21815-201ENSMUST00000178213 664 ntBASIC2.12□□□□□ -2.07
Cldn5O54942 Gm20901-201ENSMUST00000180177 664 ntBASIC2.12□□□□□ -2.07
Cldn5O54942 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
Cldn5O54942 Gm28090-201ENSMUST00000189458 664 ntBASIC2.12□□□□□ -2.07
Cldn5O54942 Gm21647-201ENSMUST00000189755 664 ntBASIC2.12□□□□□ -2.07
Cldn5O54942 Gm42570-201ENSMUST00000195937 292 ntBASIC2.12□□□□□ -2.07
Cldn5O54942 Gm45522-201ENSMUST00000210784 166 ntBASIC2.12□□□□□ -2.07
Cldn5O54942 AC131720.2-201ENSMUST00000220420 431 ntBASIC2.12□□□□□ -2.07
Cldn5O54942 AC027184.1-201ENSMUST00000226991 424 ntBASIC2.12□□□□□ -2.07
Cldn5O54942 Gm26457-201ENSMUST00000082678 78 ntBASIC2.12□□□□□ -2.07
Cldn5O54942 Gm26126-201ENSMUST00000083188 164 ntBASIC2.12□□□□□ -2.07
Cldn5O54942 Olfr831-ps1-201ENSMUST00000086496 890 ntBASIC2.12□□□□□ -2.07
Cldn5O54942 Gm25207-201ENSMUST00000093745 107 ntBASIC2.12□□□□□ -2.07
Cldn5O54942 Gm42635-201ENSMUST00000200266 2571 ntBASIC2.11□□□□□ -2.07
Cldn5O54942 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
Cldn5O54942 Gm23950-201ENSMUST00000104026 129 ntBASIC2.11□□□□□ -2.07
Cldn5O54942 Gm25269-201ENSMUST00000122601 104 ntBASIC2.11□□□□□ -2.07
Cldn5O54942 Gm16328-201ENSMUST00000126985 196 ntBASIC2.11□□□□□ -2.07
Cldn5O54942 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
Cldn5O54942 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC2.11□□□□□ -2.07
Cldn5O54942 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
Cldn5O54942 Gm24857-201ENSMUST00000158061 310 ntBASIC2.11□□□□□ -2.07
Cldn5O54942 Gm24498-201ENSMUST00000158445 102 ntBASIC2.11□□□□□ -2.07
Cldn5O54942 Gm24837-201ENSMUST00000158683 81 ntBASIC2.11□□□□□ -2.07
Cldn5O54942 Gm17689-201ENSMUST00000170030 330 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
Cldn5O54942 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
Cldn5O54942 Gm25956-201ENSMUST00000175115 217 ntBASIC2.11□□□□□ -2.07
Cldn5O54942 Gm24573-201ENSMUST00000175499 112 ntBASIC2.11□□□□□ -2.07
Cldn5O54942 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC2.11□□□□□ -2.07
Cldn5O54942 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC2.11□□□□□ -2.07
Cldn5O54942 Gm38395-201ENSMUST00000199904 830 ntBASIC2.11□□□□□ -2.07
Cldn5O54942 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC2.11□□□□□ -2.07
Cldn5O54942 AC147240.1-201ENSMUST00000218767 431 ntBASIC2.11□□□□□ -2.07
Cldn5O54942 AC166358.10-201ENSMUST00000220556 144 ntBASIC2.11□□□□□ -2.07
Cldn5O54942 AC130821.1-201ENSMUST00000221997 293 ntBASIC2.11□□□□□ -2.07
Cldn5O54942 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 140.8 ms