Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC0.72□□□□□ -2.29
Hmgb3O54879 Gm22689-201ENSMUST00000102452 110 ntBASIC0.72□□□□□ -2.29
Hmgb3O54879 Gm15659-201ENSMUST00000118881 341 ntBASIC0.72□□□□□ -2.29
Hmgb3O54879 Gm16412-201ENSMUST00000121602 273 ntBASIC0.72□□□□□ -2.29
Hmgb3O54879 n-R5s80-201ENSMUST00000122596 111 ntBASIC0.72□□□□□ -2.29
Hmgb3O54879 Gm22764-201ENSMUST00000158370 92 ntBASIC0.72□□□□□ -2.29
Hmgb3O54879 Mir3098-201ENSMUST00000175416 87 ntBASIC0.72□□□□□ -2.29
Hmgb3O54879 Gm24638-201ENSMUST00000179807 132 ntBASIC0.72□□□□□ -2.29
Hmgb3O54879 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC0.72□□□□□ -2.29
Hmgb3O54879 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC0.72□□□□□ -2.29
Hmgb3O54879 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC0.72□□□□□ -2.29
Hmgb3O54879 AC153957.1-201ENSMUST00000215235 229 ntBASIC0.72□□□□□ -2.29
Hmgb3O54879 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC0.72□□□□□ -2.29
Hmgb3O54879 AC159203.2-201ENSMUST00000221326 193 ntBASIC0.72□□□□□ -2.29
Hmgb3O54879 AC192334.2-201ENSMUST00000223087 1091 ntBASIC0.72□□□□□ -2.29
Hmgb3O54879 AC126691.1-201ENSMUST00000226534 202 ntBASIC0.72□□□□□ -2.29
Hmgb3O54879 Gm22005-201ENSMUST00000082795 141 ntBASIC0.72□□□□□ -2.29
Hmgb3O54879 Gm23516-201ENSMUST00000093728 107 ntBASIC0.72□□□□□ -2.29
Hmgb3O54879 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC0.71□□□□□ -2.3
Hmgb3O54879 Gm22785-201ENSMUST00000104087 132 ntBASIC0.71□□□□□ -2.3
Hmgb3O54879 Gm13588-201ENSMUST00000120026 135 ntBASIC0.71□□□□□ -2.3
Hmgb3O54879 Gm24808-201ENSMUST00000157993 118 ntBASIC0.71□□□□□ -2.3
Hmgb3O54879 Gm26405-201ENSMUST00000158495 100 ntBASIC0.71□□□□□ -2.3
Hmgb3O54879 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
Hmgb3O54879 Gm9022-202ENSMUST00000183285 483 ntBASIC0.71□□□□□ -2.3
Hmgb3O54879 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC0.71□□□□□ -2.3
Hmgb3O54879 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC0.71□□□□□ -2.3
Hmgb3O54879 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC0.71□□□□□ -2.3
Hmgb3O54879 AC139186.1-201ENSMUST00000197610 94 ntBASIC0.71□□□□□ -2.3
Hmgb3O54879 Gm43914-201ENSMUST00000203592 594 ntBASIC0.71□□□□□ -2.3
Hmgb3O54879 Gm45878-201ENSMUST00000211839 241 ntBASIC0.71□□□□□ -2.3
Hmgb3O54879 AC069561.2-201ENSMUST00000217596 420 ntBASIC0.71□□□□□ -2.3
Hmgb3O54879 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
Hmgb3O54879 AC133517.1-203ENSMUST00000225570 390 ntBASIC0.71□□□□□ -2.3
Hmgb3O54879 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC0.71□□□□□ -2.3
Hmgb3O54879 Gm24536-201ENSMUST00000083144 107 ntBASIC0.71□□□□□ -2.3
Hmgb3O54879 Snord1a-201ENSMUST00000083160 74 ntBASIC0.71□□□□□ -2.3
Hmgb3O54879 Mir340-201ENSMUST00000083483 98 ntBASIC0.71□□□□□ -2.3
Hmgb3O54879 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC0.71□□□□□ -2.3
Hmgb3O54879 Gm22780-201ENSMUST00000104084 132 ntBASIC0.7□□□□□ -2.3
Hmgb3O54879 Gm12449-201ENSMUST00000117572 234 ntBASIC0.7□□□□□ -2.3
Hmgb3O54879 Gm14923-201ENSMUST00000118270 155 ntBASIC0.7□□□□□ -2.3
Hmgb3O54879 Gm13356-201ENSMUST00000121678 335 ntBASIC0.7□□□□□ -2.3
Hmgb3O54879 Gm13409-201ENSMUST00000122072 546 ntBASIC0.7□□□□□ -2.3
Hmgb3O54879 Gm23118-201ENSMUST00000122657 187 ntBASIC0.7□□□□□ -2.3
Hmgb3O54879 Gm23589-201ENSMUST00000157660 105 ntBASIC0.7□□□□□ -2.3
Hmgb3O54879 Gm22556-201ENSMUST00000157803 100 ntBASIC0.7□□□□□ -2.3
Hmgb3O54879 Gm23277-201ENSMUST00000157914 136 ntBASIC0.7□□□□□ -2.3
Hmgb3O54879 Gm20543-201ENSMUST00000174200 726 ntBASIC0.7□□□□□ -2.3
Hmgb3O54879 Gm22290-201ENSMUST00000177655 107 ntBASIC0.7□□□□□ -2.3
Hmgb3O54879 Gm22583-201ENSMUST00000178031 107 ntBASIC0.7□□□□□ -2.3
Hmgb3O54879 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC0.7□□□□□ -2.3
Hmgb3O54879 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC0.7□□□□□ -2.3
Hmgb3O54879 Gm18691-201ENSMUST00000203593 872 ntBASIC0.7□□□□□ -2.3
Hmgb3O54879 Gm44137-201ENSMUST00000203670 367 ntBASIC0.7□□□□□ -2.3
Hmgb3O54879 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC0.7□□□□□ -2.3
Hmgb3O54879 Snord118-201ENSMUST00000082965 135 ntBASIC0.7□□□□□ -2.3
Hmgb3O54879 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
Hmgb3O54879 Gm23331-201ENSMUST00000157423 108 ntBASIC0.69□□□□□ -2.3
Hmgb3O54879 Gm23893-201ENSMUST00000158106 134 ntBASIC0.69□□□□□ -2.3
Hmgb3O54879 Gm24668-201ENSMUST00000158935 104 ntBASIC0.69□□□□□ -2.3
Hmgb3O54879 Gm22716-201ENSMUST00000177596 107 ntBASIC0.69□□□□□ -2.3
Hmgb3O54879 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
Hmgb3O54879 Mir6355-201ENSMUST00000183687 106 ntBASIC0.69□□□□□ -2.3
Hmgb3O54879 Gm27587-201ENSMUST00000185116 163 ntBASIC0.69□□□□□ -2.3
Hmgb3O54879 Gm17771-201ENSMUST00000194477 1147 ntBASIC0.69□□□□□ -2.3
Hmgb3O54879 Gm23370-201ENSMUST00000199545 130 ntBASIC0.69□□□□□ -2.3
Hmgb3O54879 Gm24977-201ENSMUST00000083106 163 ntBASIC0.69□□□□□ -2.3
Hmgb3O54879 Snord35a-201ENSMUST00000083884 90 ntBASIC0.69□□□□□ -2.3
Hmgb3O54879 Gm26074-201ENSMUST00000104063 129 ntBASIC0.68□□□□□ -2.3
Hmgb3O54879 Gm24588-201ENSMUST00000116696 83 ntBASIC0.68□□□□□ -2.3
Hmgb3O54879 Gm15162-201ENSMUST00000119325 283 ntBASIC0.68□□□□□ -2.3
Hmgb3O54879 Gm24168-201ENSMUST00000178825 107 ntBASIC0.68□□□□□ -2.3
Hmgb3O54879 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC0.68□□□□□ -2.3
Hmgb3O54879 Gm27974-201ENSMUST00000183415 105 ntBASIC0.68□□□□□ -2.3
Hmgb3O54879 Gm27271-201ENSMUST00000183509 170 ntBASIC0.68□□□□□ -2.3
Hmgb3O54879 Gm9156-201ENSMUST00000189660 463 ntBASIC0.68□□□□□ -2.3
Hmgb3O54879 Gm37727-201ENSMUST00000191637 819 ntBASIC0.68□□□□□ -2.3
Hmgb3O54879 Gm37693-201ENSMUST00000194562 234 ntBASIC0.68□□□□□ -2.3
Hmgb3O54879 Trav15d-3-201ENSMUST00000198604 167 ntBASIC0.68□□□□□ -2.3
Hmgb3O54879 Trav15n-3-201ENSMUST00000200498 168 ntBASIC0.68□□□□□ -2.3
Hmgb3O54879 Gm29848-201ENSMUST00000203107 295 ntBASIC0.68□□□□□ -2.3
Hmgb3O54879 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC0.68□□□□□ -2.3
Hmgb3O54879 AC170600.1-201ENSMUST00000228763 277 ntBASIC0.68□□□□□ -2.3
Hmgb3O54879 Gm25357-201ENSMUST00000082745 72 ntBASIC0.68□□□□□ -2.3
Hmgb3O54879 Gm22972-201ENSMUST00000083297 131 ntBASIC0.68□□□□□ -2.3
Hmgb3O54879 Gm24282-201ENSMUST00000104232 66 ntBASIC0.67□□□□□ -2.3
Hmgb3O54879 Gm5396-201ENSMUST00000121222 532 ntBASIC0.67□□□□□ -2.3
Hmgb3O54879 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC0.67□□□□□ -2.3
Hmgb3O54879 Gm22233-201ENSMUST00000157464 114 ntBASIC0.67□□□□□ -2.3
Hmgb3O54879 Gm22186-201ENSMUST00000157822 122 ntBASIC0.67□□□□□ -2.3
Hmgb3O54879 Gm23317-201ENSMUST00000157999 129 ntBASIC0.67□□□□□ -2.3
Hmgb3O54879 Gm25868-201ENSMUST00000158253 114 ntBASIC0.67□□□□□ -2.3
Hmgb3O54879 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
Hmgb3O54879 Gm23636-201ENSMUST00000175070 95 ntBASIC0.67□□□□□ -2.3
Hmgb3O54879 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.67□□□□□ -2.3
Hmgb3O54879 Gm28912-201ENSMUST00000189001 234 ntBASIC0.67□□□□□ -2.3
Hmgb3O54879 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC0.67□□□□□ -2.3
Hmgb3O54879 AC126267.1-201ENSMUST00000214282 284 ntBASIC0.67□□□□□ -2.3
Hmgb3O54879 4930513O06Rik-201ENSMUST00000033625 804 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
Retrieved 100 of 76,532 protein–RNA pairs in 139.1 ms