Protein–RNA interactions for Protein: O54788

Dffb, DNA fragmentation factor subunit beta, mousemouse

Known RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffbO54788 Gm24799-201ENSMUST00000178431 79 ntBASIC2.56□□□□□ -2
DffbO54788 Mir8103-201ENSMUST00000183945 107 ntBASIC2.56□□□□□ -2
DffbO54788 Gm29104-201ENSMUST00000186304 222 ntBASIC2.56□□□□□ -2
DffbO54788 Gm29005-201ENSMUST00000186773 320 ntBASIC2.56□□□□□ -2
DffbO54788 Gm28848-201ENSMUST00000189984 168 ntBASIC2.56□□□□□ -2
DffbO54788 Gm43521-201ENSMUST00000197838 255 ntBASIC2.56□□□□□ -2
DffbO54788 Gm43107-201ENSMUST00000198729 255 ntBASIC2.56□□□□□ -2
DffbO54788 AC121942.2-201ENSMUST00000223824 600 ntBASIC2.56□□□□□ -2
DffbO54788 Defb9-201ENSMUST00000057076 310 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
DffbO54788 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC2.56□□□□□ -2
DffbO54788 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
DffbO54788 Gm25930-201ENSMUST00000082785 107 ntBASIC2.56□□□□□ -2
DffbO54788 Gm23297-201ENSMUST00000083184 127 ntBASIC2.56□□□□□ -2
DffbO54788 Gm8473-201ENSMUST00000176697 1885 ntBASIC2.56□□□□□ -2
DffbO54788 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.56□□□□□ -2
DffbO54788 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.56□□□□□ -2
DffbO54788 Snord14c-201ENSMUST00000101927 86 ntBASIC2.55□□□□□ -2
DffbO54788 Gm24376-201ENSMUST00000104399 127 ntBASIC2.55□□□□□ -2
DffbO54788 Mir872-201ENSMUST00000104728 81 ntBASIC2.55□□□□□ -2
DffbO54788 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
DffbO54788 Gm14770-201ENSMUST00000122197 312 ntBASIC2.55□□□□□ -2
DffbO54788 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC2.55□□□□□ -2
DffbO54788 Gm38311-201ENSMUST00000192945 165 ntBASIC2.55□□□□□ -2
DffbO54788 AL603834.1-201ENSMUST00000198372 121 ntBASIC2.55□□□□□ -2
DffbO54788 Gm43300-201ENSMUST00000198540 2043 ntBASIC2.55□□□□□ -2
DffbO54788 Gm44459-201ENSMUST00000203926 160 ntBASIC2.55□□□□□ -2
DffbO54788 AC125374.2-201ENSMUST00000214278 162 ntBASIC2.55□□□□□ -2
DffbO54788 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
DffbO54788 Gm7065-201ENSMUST00000222150 474 ntBASIC2.55□□□□□ -2
DffbO54788 AC164164.1-201ENSMUST00000223245 2340 ntBASIC2.55□□□□□ -2
DffbO54788 AC100209.2-201ENSMUST00000224461 451 ntBASIC2.55□□□□□ -2
DffbO54788 Gm22062-201ENSMUST00000082563 107 ntBASIC2.55□□□□□ -2
DffbO54788 Gm10222-201ENSMUST00000088336 294 ntBASIC2.55□□□□□ -2
DffbO54788 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
DffbO54788 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
DffbO54788 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC2.55□□□□□ -2
DffbO54788 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
DffbO54788 Zfp40-206ENSMUST00000172177 2736 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
DffbO54788 Ighv3-3-201ENSMUST00000103476 296 ntAPPRIS P1 BASIC2.54□□□□□ -2
DffbO54788 n-R5s67-201ENSMUST00000104336 114 ntBASIC2.54□□□□□ -2
DffbO54788 Gm22023-201ENSMUST00000104354 130 ntBASIC2.54□□□□□ -2
DffbO54788 Gm13432-201ENSMUST00000118861 241 ntBASIC2.54□□□□□ -2
DffbO54788 Gm15190-201ENSMUST00000120855 276 ntBASIC2.54□□□□□ -2
DffbO54788 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC2.54□□□□□ -2
DffbO54788 Gm24892-201ENSMUST00000122747 104 ntBASIC2.54□□□□□ -2
DffbO54788 Gm25184-201ENSMUST00000157753 163 ntBASIC2.54□□□□□ -2
DffbO54788 Gm22382-201ENSMUST00000158185 130 ntBASIC2.54□□□□□ -2
DffbO54788 AC154297.1-201ENSMUST00000171334 397 ntBASIC2.54□□□□□ -2
DffbO54788 Gm25470-201ENSMUST00000175576 111 ntBASIC2.54□□□□□ -2
DffbO54788 Gm21893-201ENSMUST00000179119 397 ntBASIC2.54□□□□□ -2
DffbO54788 Mir6399-201ENSMUST00000184050 84 ntBASIC2.54□□□□□ -2
DffbO54788 Gm28710-201ENSMUST00000186866 489 ntTSL 5 BASIC2.54□□□□□ -2
DffbO54788 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC2.54□□□□□ -2
DffbO54788 CT010454.1-201ENSMUST00000225975 265 ntBASIC2.54□□□□□ -2
DffbO54788 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
DffbO54788 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
DffbO54788 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.53□□□□□ -2
DffbO54788 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
DffbO54788 n-R5s31-201ENSMUST00000104162 110 ntBASIC2.53□□□□□ -2
DffbO54788 Mir1b-201ENSMUST00000117012 122 ntBASIC2.53□□□□□ -2
DffbO54788 Gm11936-201ENSMUST00000118323 160 ntBASIC2.53□□□□□ -2
DffbO54788 Gm12793-201ENSMUST00000119268 292 ntBASIC2.53□□□□□ -2
DffbO54788 Gm12723-201ENSMUST00000120700 451 ntBASIC2.53□□□□□ -2
DffbO54788 Gm5396-201ENSMUST00000121222 532 ntBASIC2.53□□□□□ -2
DffbO54788 Gm7582-201ENSMUST00000160831 603 ntBASIC2.53□□□□□ -2
DffbO54788 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC2.53□□□□□ -2
DffbO54788 Gm23047-201ENSMUST00000177661 94 ntBASIC2.53□□□□□ -2
DffbO54788 Gm23860-201ENSMUST00000179446 132 ntBASIC2.53□□□□□ -2
DffbO54788 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC2.53□□□□□ -2
DffbO54788 Gm27374-201ENSMUST00000183660 81 ntBASIC2.53□□□□□ -2
DffbO54788 Gm29597-201ENSMUST00000188035 308 ntBASIC2.53□□□□□ -2
DffbO54788 Gm37586-201ENSMUST00000193654 204 ntBASIC2.53□□□□□ -2
DffbO54788 Gm34411-201ENSMUST00000201180 280 ntTSL 3 BASIC2.53□□□□□ -2
DffbO54788 Gm44594-201ENSMUST00000208982 407 ntBASIC2.53□□□□□ -2
DffbO54788 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC2.53□□□□□ -2
DffbO54788 Gm24152-201ENSMUST00000082764 163 ntBASIC2.53□□□□□ -2
DffbO54788 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
DffbO54788 Olfr1111-203ENSMUST00000216378 1636 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
DffbO54788 Zfp970-202ENSMUST00000108952 1569 ntAPPRIS P1 TSL 2 BASIC2.53□□□□□ -2.01
DffbO54788 Gm43879-201ENSMUST00000203811 3760 ntBASIC2.52□□□□□ -2.01
DffbO54788 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
DffbO54788 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
DffbO54788 Mir499-201ENSMUST00000102357 79 ntBASIC2.52□□□□□ -2.01
DffbO54788 Gm14973-201ENSMUST00000117248 255 ntBASIC2.52□□□□□ -2.01
DffbO54788 Gm14792-201ENSMUST00000119725 258 ntBASIC2.52□□□□□ -2.01
DffbO54788 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
DffbO54788 Gm24388-201ENSMUST00000177872 107 ntBASIC2.52□□□□□ -2.01
DffbO54788 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
DffbO54788 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
DffbO54788 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
DffbO54788 Gm17522-201ENSMUST00000178144 498 ntBASIC2.52□□□□□ -2.01
DffbO54788 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
DffbO54788 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
DffbO54788 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
DffbO54788 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC2.52□□□□□ -2.01
DffbO54788 Gm29140-201ENSMUST00000190187 476 ntBASIC2.52□□□□□ -2.01
DffbO54788 Traj57-202ENSMUST00000196977 63 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
DffbO54788 Mir3535-201ENSMUST00000197651 147 ntBASIC2.52□□□□□ -2.01
DffbO54788 Gm43746-201ENSMUST00000200028 317 ntBASIC2.52□□□□□ -2.01
DffbO54788 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC2.52□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms