Protein–RNA interactions for Protein: O54786

Dffa, DNA fragmentation factor subunit alpha, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DffaO54786 AC112274.2-201ENSMUST00000218436 170 ntBASIC0.7□□□□□ -2.3
DffaO54786 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC0.7□□□□□ -2.3
DffaO54786 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC0.7□□□□□ -2.3
DffaO54786 AC154328.1-201ENSMUST00000225875 307 ntBASIC0.7□□□□□ -2.3
DffaO54786 Gm22620-201ENSMUST00000082700 133 ntBASIC0.7□□□□□ -2.3
DffaO54786 Gm25038-201ENSMUST00000082928 130 ntBASIC0.7□□□□□ -2.3
DffaO54786 Gm26301-201ENSMUST00000104813 95 ntBASIC0.69□□□□□ -2.3
DffaO54786 Gm12449-201ENSMUST00000117572 234 ntBASIC0.69□□□□□ -2.3
DffaO54786 Gm12016-201ENSMUST00000119079 681 ntBASIC0.69□□□□□ -2.3
DffaO54786 Gm24598-201ENSMUST00000122510 74 ntBASIC0.69□□□□□ -2.3
DffaO54786 Gm22027-201ENSMUST00000122737 127 ntBASIC0.69□□□□□ -2.3
DffaO54786 Gm26038-201ENSMUST00000158151 106 ntBASIC0.69□□□□□ -2.3
DffaO54786 Gm23858-201ENSMUST00000158384 106 ntBASIC0.69□□□□□ -2.3
DffaO54786 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
DffaO54786 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC0.69□□□□□ -2.3
DffaO54786 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC0.69□□□□□ -2.3
DffaO54786 Gm21089-201ENSMUST00000215843 325 ntBASIC0.69□□□□□ -2.3
DffaO54786 AC091260.1-201ENSMUST00000216112 229 ntBASIC0.69□□□□□ -2.3
DffaO54786 Gm2628-201ENSMUST00000218019 426 ntBASIC0.69□□□□□ -2.3
DffaO54786 AC126691.1-201ENSMUST00000226534 202 ntBASIC0.69□□□□□ -2.3
DffaO54786 Gm18795-202ENSMUST00000223373 2920 ntBASIC0.68□□□□□ -2.3
DffaO54786 Gm26074-201ENSMUST00000104063 129 ntBASIC0.68□□□□□ -2.3
DffaO54786 Gm22785-201ENSMUST00000104087 132 ntBASIC0.68□□□□□ -2.3
DffaO54786 Gm15177-201ENSMUST00000120491 577 ntBASIC0.68□□□□□ -2.3
DffaO54786 Gm13992-201ENSMUST00000120558 156 ntBASIC0.68□□□□□ -2.3
DffaO54786 n-R5s157-201ENSMUST00000122543 121 ntBASIC0.68□□□□□ -2.3
DffaO54786 Gm24480-201ENSMUST00000157442 103 ntBASIC0.68□□□□□ -2.3
DffaO54786 Gm23586-201ENSMUST00000157657 123 ntBASIC0.68□□□□□ -2.3
DffaO54786 Gm24808-201ENSMUST00000157993 118 ntBASIC0.68□□□□□ -2.3
DffaO54786 Gm17052-201ENSMUST00000165496 289 ntBASIC0.68□□□□□ -2.3
DffaO54786 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC0.68□□□□□ -2.3
DffaO54786 Gm18160-201ENSMUST00000214279 827 ntBASIC0.68□□□□□ -2.3
DffaO54786 AC153646.1-201ENSMUST00000223229 1279 ntBASIC0.68□□□□□ -2.3
DffaO54786 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
DffaO54786 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
DffaO54786 Gm11572-201ENSMUST00000119164 120 ntBASIC0.67□□□□□ -2.3
DffaO54786 Gm11389-201ENSMUST00000121407 430 ntBASIC0.67□□□□□ -2.3
DffaO54786 Gm24896-201ENSMUST00000122741 135 ntBASIC0.67□□□□□ -2.3
DffaO54786 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
DffaO54786 Mir3964-201ENSMUST00000174898 74 ntBASIC0.67□□□□□ -2.3
DffaO54786 Mir3109-201ENSMUST00000175301 88 ntBASIC0.67□□□□□ -2.3
DffaO54786 Gm24366-201ENSMUST00000175383 86 ntBASIC0.67□□□□□ -2.3
DffaO54786 Gm23355-201ENSMUST00000177614 107 ntBASIC0.67□□□□□ -2.3
DffaO54786 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
DffaO54786 Mir6540-201ENSMUST00000184886 108 ntBASIC0.67□□□□□ -2.3
DffaO54786 Gm28409-201ENSMUST00000187064 103 ntBASIC0.67□□□□□ -2.3
DffaO54786 Gm45878-201ENSMUST00000211839 241 ntBASIC0.67□□□□□ -2.3
DffaO54786 AC113305.1-201ENSMUST00000214664 724 ntBASIC0.67□□□□□ -2.3
DffaO54786 Gm23721-201ENSMUST00000083005 107 ntBASIC0.67□□□□□ -2.3
DffaO54786 Snord1a-201ENSMUST00000083160 74 ntBASIC0.67□□□□□ -2.3
DffaO54786 Gm23462-201ENSMUST00000083264 104 ntBASIC0.67□□□□□ -2.3
DffaO54786 Gm25313-201ENSMUST00000101817 116 ntBASIC0.66□□□□□ -2.3
DffaO54786 Gm24588-201ENSMUST00000116696 83 ntBASIC0.66□□□□□ -2.3
DffaO54786 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC0.66□□□□□ -2.3
DffaO54786 Gm22233-201ENSMUST00000157464 114 ntBASIC0.66□□□□□ -2.3
DffaO54786 Gm25868-201ENSMUST00000158253 114 ntBASIC0.66□□□□□ -2.3
DffaO54786 Gm22515-201ENSMUST00000158273 305 ntBASIC0.66□□□□□ -2.3
DffaO54786 Gm16038-201ENSMUST00000159317 193 ntBASIC0.66□□□□□ -2.3
DffaO54786 Mir1954-201ENSMUST00000175595 86 ntBASIC0.66□□□□□ -2.3
DffaO54786 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC0.66□□□□□ -2.3
DffaO54786 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC0.66□□□□□ -2.3
DffaO54786 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC0.66□□□□□ -2.3
DffaO54786 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC0.66□□□□□ -2.3
DffaO54786 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC0.66□□□□□ -2.3
DffaO54786 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC0.66□□□□□ -2.3
DffaO54786 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC0.66□□□□□ -2.3
DffaO54786 Gm23287-201ENSMUST00000179427 116 ntBASIC0.66□□□□□ -2.3
DffaO54786 Snord116l14-201ENSMUST00000179875 94 ntBASIC0.66□□□□□ -2.3
DffaO54786 Gm23143-201ENSMUST00000180137 116 ntBASIC0.66□□□□□ -2.3
DffaO54786 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC0.66□□□□□ -2.3
DffaO54786 Gm27942-201ENSMUST00000184669 101 ntBASIC0.66□□□□□ -2.3
DffaO54786 Gm29005-201ENSMUST00000186773 320 ntBASIC0.66□□□□□ -2.3
DffaO54786 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC0.66□□□□□ -2.3
DffaO54786 Gm37599-201ENSMUST00000193067 489 ntBASIC0.66□□□□□ -2.3
DffaO54786 Gm37319-201ENSMUST00000193500 636 ntBASIC0.66□□□□□ -2.3
DffaO54786 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC0.66□□□□□ -2.3
DffaO54786 Gm18691-201ENSMUST00000203593 872 ntBASIC0.66□□□□□ -2.3
DffaO54786 Gm44446-201ENSMUST00000204864 255 ntBASIC0.66□□□□□ -2.3
DffaO54786 Gm44609-201ENSMUST00000207157 460 ntBASIC0.66□□□□□ -2.3
DffaO54786 Gm10264-201ENSMUST00000220589 429 ntBASIC0.66□□□□□ -2.3
DffaO54786 AC159621.1-201ENSMUST00000223249 163 ntBASIC0.66□□□□□ -2.3
DffaO54786 Olfr916-201ENSMUST00000081196 933 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
DffaO54786 Gm24871-201ENSMUST00000083099 116 ntBASIC0.66□□□□□ -2.3
DffaO54786 Gm26263-201ENSMUST00000083281 164 ntBASIC0.66□□□□□ -2.3
DffaO54786 Mir19a-201ENSMUST00000083482 82 ntBASIC0.66□□□□□ -2.3
DffaO54786 Gm23848-201ENSMUST00000083826 106 ntBASIC0.66□□□□□ -2.3
DffaO54786 Rnu5g-201ENSMUST00000093721 116 ntBASIC0.66□□□□□ -2.3
DffaO54786 Gm25544-201ENSMUST00000122676 120 ntBASIC0.65□□□□□ -2.31
DffaO54786 Snora24-201ENSMUST00000174989 130 ntBASIC0.65□□□□□ -2.31
DffaO54786 Gm4076-201ENSMUST00000179230 965 ntBASIC0.65□□□□□ -2.31
DffaO54786 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC0.65□□□□□ -2.31
DffaO54786 Gm34015-201ENSMUST00000194908 451 ntBASIC0.65□□□□□ -2.31
DffaO54786 Ighv1-32-201ENSMUST00000195149 351 ntBASIC0.65□□□□□ -2.31
DffaO54786 Gm2829-201ENSMUST00000213121 499 ntBASIC0.65□□□□□ -2.31
DffaO54786 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC0.65□□□□□ -2.31
DffaO54786 AC123709.1-201ENSMUST00000224848 345 ntBASIC0.65□□□□□ -2.31
DffaO54786 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC0.65□□□□□ -2.31
DffaO54786 Gm24282-201ENSMUST00000104232 66 ntBASIC0.64□□□□□ -2.31
DffaO54786 Gm22038-201ENSMUST00000157277 242 ntBASIC0.64□□□□□ -2.31
DffaO54786 Gm23277-201ENSMUST00000157914 136 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms