Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC0.87□□□□□ -2.27
Sdc4O35988 Gm38274-201ENSMUST00000195689 148 ntBASIC0.87□□□□□ -2.27
Sdc4O35988 Defa-ps13-202ENSMUST00000212360 204 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
Sdc4O35988 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC0.87□□□□□ -2.27
Sdc4O35988 AC159621.1-201ENSMUST00000223249 163 ntBASIC0.87□□□□□ -2.27
Sdc4O35988 AC102352.1-201ENSMUST00000224187 582 ntBASIC0.87□□□□□ -2.27
Sdc4O35988 Sval1-201ENSMUST00000031898 615 ntAPPRIS P1 TSL 1 (best) BASIC0.87□□□□□ -2.27
Sdc4O35988 AC161250.2-201ENSMUST00000215114 3107 ntBASIC0.87□□□□□ -2.27
Sdc4O35988 Gm37061-201ENSMUST00000195066 3243 ntBASIC0.87□□□□□ -2.27
Sdc4O35988 Gm25563-201ENSMUST00000104603 74 ntBASIC0.86□□□□□ -2.27
Sdc4O35988 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC0.86□□□□□ -2.27
Sdc4O35988 Gm14417-201ENSMUST00000120036 1074 ntBASIC0.86□□□□□ -2.27
Sdc4O35988 Gm15861-201ENSMUST00000120979 339 ntBASIC0.86□□□□□ -2.27
Sdc4O35988 Gm24915-201ENSMUST00000157288 78 ntBASIC0.86□□□□□ -2.27
Sdc4O35988 Gm24229-201ENSMUST00000158830 118 ntBASIC0.86□□□□□ -2.27
Sdc4O35988 Gm22800-201ENSMUST00000175627 94 ntBASIC0.86□□□□□ -2.27
Sdc4O35988 Gm21754-201ENSMUST00000177550 479 ntBASIC0.86□□□□□ -2.27
Sdc4O35988 Snord116l14-201ENSMUST00000179875 94 ntBASIC0.86□□□□□ -2.27
Sdc4O35988 Gm28412-201ENSMUST00000187243 177 ntBASIC0.86□□□□□ -2.27
Sdc4O35988 Gm18691-201ENSMUST00000203593 872 ntBASIC0.86□□□□□ -2.27
Sdc4O35988 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC0.86□□□□□ -2.27
Sdc4O35988 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
Sdc4O35988 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC0.86□□□□□ -2.27
Sdc4O35988 AC140477.1-201ENSMUST00000222354 246 ntBASIC0.86□□□□□ -2.27
Sdc4O35988 Gm22062-201ENSMUST00000082563 107 ntBASIC0.86□□□□□ -2.27
Sdc4O35988 Gm23516-201ENSMUST00000093728 107 ntBASIC0.86□□□□□ -2.27
Sdc4O35988 Gm14914-201ENSMUST00000117576 2031 ntBASIC0.86□□□□□ -2.27
Sdc4O35988 Olfr307-203ENSMUST00000217494 4515 ntAPPRIS P1 TSL 5 BASIC0.85□□□□□ -2.27
Sdc4O35988 Gm25088-201ENSMUST00000101803 79 ntBASIC0.85□□□□□ -2.27
Sdc4O35988 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
Sdc4O35988 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC0.85□□□□□ -2.27
Sdc4O35988 Gm22425-201ENSMUST00000158532 138 ntBASIC0.85□□□□□ -2.27
Sdc4O35988 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC0.85□□□□□ -2.27
Sdc4O35988 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC0.85□□□□□ -2.27
Sdc4O35988 Gm25312-201ENSMUST00000178972 107 ntBASIC0.85□□□□□ -2.27
Sdc4O35988 Mir6388-201ENSMUST00000184417 75 ntBASIC0.85□□□□□ -2.27
Sdc4O35988 Mir6540-201ENSMUST00000184886 108 ntBASIC0.85□□□□□ -2.27
Sdc4O35988 Gm37319-201ENSMUST00000193500 636 ntBASIC0.85□□□□□ -2.27
Sdc4O35988 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC0.85□□□□□ -2.27
Sdc4O35988 Gm45366-201ENSMUST00000209828 384 ntBASIC0.85□□□□□ -2.27
Sdc4O35988 Gm18160-201ENSMUST00000214279 827 ntBASIC0.85□□□□□ -2.27
Sdc4O35988 AC158597.1-201ENSMUST00000216234 150 ntBASIC0.85□□□□□ -2.27
Sdc4O35988 AC131085.1-201ENSMUST00000224746 656 ntBASIC0.85□□□□□ -2.27
Sdc4O35988 AC170600.1-201ENSMUST00000228763 277 ntBASIC0.85□□□□□ -2.27
Sdc4O35988 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC0.85□□□□□ -2.27
Sdc4O35988 Gm15807-201ENSMUST00000119880 1128 ntBASIC0.84□□□□□ -2.27
Sdc4O35988 Gm11606-201ENSMUST00000120706 617 ntBASIC0.84□□□□□ -2.27
Sdc4O35988 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC0.84□□□□□ -2.27
Sdc4O35988 Gm26102-201ENSMUST00000157251 284 ntBASIC0.84□□□□□ -2.27
Sdc4O35988 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC0.84□□□□□ -2.27
Sdc4O35988 Ighv1-32-201ENSMUST00000195149 351 ntBASIC0.84□□□□□ -2.27
Sdc4O35988 Gm18546-201ENSMUST00000197245 676 ntBASIC0.84□□□□□ -2.27
Sdc4O35988 Mir3961-201ENSMUST00000198795 59 ntBASIC0.84□□□□□ -2.27
Sdc4O35988 Gm44830-201ENSMUST00000207667 584 ntBASIC0.84□□□□□ -2.27
Sdc4O35988 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC0.84□□□□□ -2.27
Sdc4O35988 AC112274.2-201ENSMUST00000218436 170 ntBASIC0.84□□□□□ -2.27
Sdc4O35988 AC158606.1-201ENSMUST00000220078 325 ntBASIC0.84□□□□□ -2.27
Sdc4O35988 CT010449.1-201ENSMUST00000220624 153 ntBASIC0.84□□□□□ -2.27
Sdc4O35988 Nkain2-202ENSMUST00000092603 273 ntTSL 5 BASIC0.84□□□□□ -2.27
Sdc4O35988 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC0.83□□□□□ -2.28
Sdc4O35988 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC0.83□□□□□ -2.28
Sdc4O35988 Gm26002-201ENSMUST00000101915 107 ntBASIC0.83□□□□□ -2.28
Sdc4O35988 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
Sdc4O35988 Gm25325-201ENSMUST00000122559 86 ntBASIC0.83□□□□□ -2.28
Sdc4O35988 Gm2020-201ENSMUST00000145242 579 ntBASIC0.83□□□□□ -2.28
Sdc4O35988 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC0.83□□□□□ -2.28
Sdc4O35988 Gm23752-201ENSMUST00000157584 115 ntBASIC0.83□□□□□ -2.28
Sdc4O35988 Gm23196-201ENSMUST00000158806 107 ntBASIC0.83□□□□□ -2.28
Sdc4O35988 Gm24464-201ENSMUST00000179697 107 ntBASIC0.83□□□□□ -2.28
Sdc4O35988 Gm16399-201ENSMUST00000181423 219 ntBASIC0.83□□□□□ -2.28
Sdc4O35988 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC0.83□□□□□ -2.28
Sdc4O35988 Mir7675-201ENSMUST00000184262 58 ntBASIC0.83□□□□□ -2.28
Sdc4O35988 Gm18357-201ENSMUST00000188184 580 ntBASIC0.83□□□□□ -2.28
Sdc4O35988 Gm44458-201ENSMUST00000196594 143 ntBASIC0.83□□□□□ -2.28
Sdc4O35988 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC0.83□□□□□ -2.28
Sdc4O35988 Gm17911-201ENSMUST00000210806 877 ntBASIC0.83□□□□□ -2.28
Sdc4O35988 Gm19441-201ENSMUST00000221545 330 ntBASIC0.83□□□□□ -2.28
Sdc4O35988 AC154521.1-201ENSMUST00000222635 330 ntBASIC0.83□□□□□ -2.28
Sdc4O35988 AC166830.2-201ENSMUST00000225821 196 ntBASIC0.83□□□□□ -2.28
Sdc4O35988 AC122341.1-201ENSMUST00000227291 560 ntBASIC0.83□□□□□ -2.28
Sdc4O35988 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
Sdc4O35988 Gm12417-201ENSMUST00000119153 403 ntBASIC0.82□□□□□ -2.28
Sdc4O35988 Gm25115-201ENSMUST00000157187 140 ntBASIC0.82□□□□□ -2.28
Sdc4O35988 Gm23078-201ENSMUST00000157848 148 ntBASIC0.82□□□□□ -2.28
Sdc4O35988 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC0.82□□□□□ -2.28
Sdc4O35988 Mir6985-201ENSMUST00000184641 61 ntBASIC0.82□□□□□ -2.28
Sdc4O35988 Gm28666-201ENSMUST00000186649 274 ntBASIC0.82□□□□□ -2.28
Sdc4O35988 Gm28299-201ENSMUST00000189908 339 ntBASIC0.82□□□□□ -2.28
Sdc4O35988 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC0.82□□□□□ -2.28
Sdc4O35988 Gm44654-201ENSMUST00000208052 329 ntBASIC0.82□□□□□ -2.28
Sdc4O35988 Gm17990-201ENSMUST00000211728 553 ntBASIC0.82□□□□□ -2.28
Sdc4O35988 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC0.82□□□□□ -2.28
Sdc4O35988 Gm22620-201ENSMUST00000082700 133 ntBASIC0.82□□□□□ -2.28
Sdc4O35988 Gm44177-201ENSMUST00000204338 2667 ntBASIC0.82□□□□□ -2.28
Sdc4O35988 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC0.82□□□□□ -2.28
Sdc4O35988 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
Sdc4O35988 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
Sdc4O35988 Gm14898-201ENSMUST00000120202 645 ntBASIC0.81□□□□□ -2.28
Sdc4O35988 Gm14599-201ENSMUST00000120469 474 ntBASIC0.81□□□□□ -2.28
Sdc4O35988 Gm24892-201ENSMUST00000122747 104 ntBASIC0.81□□□□□ -2.28
Retrieved 100 of 76,532 protein–RNA pairs in 91 ms