Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC2.55□□□□□ -2
Clk3O35492 Gm24443-201ENSMUST00000157242 132 ntBASIC2.55□□□□□ -2
Clk3O35492 Gm25476-201ENSMUST00000175125 185 ntBASIC2.55□□□□□ -2
Clk3O35492 Mir7242-201ENSMUST00000183710 79 ntBASIC2.55□□□□□ -2
Clk3O35492 Gm28995-201ENSMUST00000186625 261 ntBASIC2.55□□□□□ -2
Clk3O35492 Gm15235-201ENSMUST00000200572 194 ntBASIC2.55□□□□□ -2
Clk3O35492 Gm44353-201ENSMUST00000200618 138 ntBASIC2.55□□□□□ -2
Clk3O35492 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC2.55□□□□□ -2
Clk3O35492 Olfr1102-202ENSMUST00000214002 1806 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Clk3O35492 AC164161.1-201ENSMUST00000214076 639 ntBASIC2.55□□□□□ -2
Clk3O35492 Gm30534-201ENSMUST00000217928 207 ntBASIC2.55□□□□□ -2
Clk3O35492 AC160962.2-201ENSMUST00000224761 632 ntBASIC2.55□□□□□ -2
Clk3O35492 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC2.55□□□□□ -2
Clk3O35492 AC151833.1-201ENSMUST00000227752 574 ntBASIC2.55□□□□□ -2
Clk3O35492 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC2.55□□□□□ -2
Clk3O35492 Gm22249-201ENSMUST00000082485 136 ntBASIC2.55□□□□□ -2
Clk3O35492 Gm23378-201ENSMUST00000082942 107 ntBASIC2.55□□□□□ -2
Clk3O35492 Gm23040-201ENSMUST00000083869 163 ntBASIC2.55□□□□□ -2
Clk3O35492 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
Clk3O35492 Gm37479-201ENSMUST00000194169 3841 ntBASIC2.54□□□□□ -2
Clk3O35492 Olfr103-202ENSMUST00000173472 3079 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
Clk3O35492 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.54□□□□□ -2
Clk3O35492 Gm25500-201ENSMUST00000104426 123 ntBASIC2.54□□□□□ -2
Clk3O35492 Vma21-ps-201ENSMUST00000114578 306 ntAPPRIS P1 BASIC2.54□□□□□ -2
Clk3O35492 Gm14843-201ENSMUST00000119596 212 ntBASIC2.54□□□□□ -2
Clk3O35492 Gm15561-201ENSMUST00000124326 540 ntTSL 3 BASIC2.54□□□□□ -2
Clk3O35492 4930527E20Rik-201ENSMUST00000135700 351 ntTSL 1 (best) BASIC2.54□□□□□ -2
Clk3O35492 Gm24436-201ENSMUST00000157889 302 ntBASIC2.54□□□□□ -2
Clk3O35492 Gm24726-201ENSMUST00000158232 121 ntBASIC2.54□□□□□ -2
Clk3O35492 Gm24879-201ENSMUST00000158386 143 ntBASIC2.54□□□□□ -2
Clk3O35492 Gm24681-201ENSMUST00000158760 107 ntBASIC2.54□□□□□ -2
Clk3O35492 Gm6788-201ENSMUST00000166459 270 ntBASIC2.54□□□□□ -2
Clk3O35492 Gm25956-201ENSMUST00000175115 217 ntBASIC2.54□□□□□ -2
Clk3O35492 Mir3965-201ENSMUST00000175570 69 ntBASIC2.54□□□□□ -2
Clk3O35492 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC2.54□□□□□ -2
Clk3O35492 Gm27761-201ENSMUST00000184091 131 ntBASIC2.54□□□□□ -2
Clk3O35492 Gm43600-201ENSMUST00000202134 223 ntBASIC2.54□□□□□ -2
Clk3O35492 AC069074.2-201ENSMUST00000217819 428 ntBASIC2.54□□□□□ -2
Clk3O35492 AC133156.1-202ENSMUST00000227284 363 ntBASIC2.54□□□□□ -2
Clk3O35492 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
Clk3O35492 Gm24460-201ENSMUST00000082731 106 ntBASIC2.54□□□□□ -2
Clk3O35492 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC2.54□□□□□ -2
Clk3O35492 Gm26329-201ENSMUST00000093723 110 ntBASIC2.54□□□□□ -2
Clk3O35492 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.54□□□□□ -2
Clk3O35492 Cylc1-201ENSMUST00000101282 1923 ntAPPRIS P2 TSL 1 (best) BASIC2.54□□□□□ -2
Clk3O35492 Olfr136-204ENSMUST00000214035 1925 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
Clk3O35492 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC2.53□□□□□ -2
Clk3O35492 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.53□□□□□ -2
Clk3O35492 Gm23175-201ENSMUST00000104371 132 ntBASIC2.53□□□□□ -2
Clk3O35492 Gm12304-201ENSMUST00000120312 385 ntBASIC2.53□□□□□ -2
Clk3O35492 Gm11606-201ENSMUST00000120706 617 ntBASIC2.53□□□□□ -2
Clk3O35492 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC2.53□□□□□ -2
Clk3O35492 Gm23589-201ENSMUST00000157660 105 ntBASIC2.53□□□□□ -2
Clk3O35492 Ear-ps8-201ENSMUST00000161935 354 ntBASIC2.53□□□□□ -2
Clk3O35492 Gm23921-201ENSMUST00000175258 107 ntBASIC2.53□□□□□ -2
Clk3O35492 Mir7062-201ENSMUST00000185038 66 ntBASIC2.53□□□□□ -2
Clk3O35492 Gm29512-201ENSMUST00000185544 315 ntBASIC2.53□□□□□ -2
Clk3O35492 Gm28110-201ENSMUST00000185782 315 ntBASIC2.53□□□□□ -2
Clk3O35492 Gm29057-201ENSMUST00000186468 315 ntBASIC2.53□□□□□ -2
Clk3O35492 Gm29661-201ENSMUST00000186781 315 ntBASIC2.53□□□□□ -2
Clk3O35492 Gm28737-201ENSMUST00000186808 315 ntBASIC2.53□□□□□ -2
Clk3O35492 Gm29118-201ENSMUST00000186908 315 ntBASIC2.53□□□□□ -2
Clk3O35492 Gm28433-201ENSMUST00000187085 315 ntBASIC2.53□□□□□ -2
Clk3O35492 Gm28759-201ENSMUST00000187621 315 ntBASIC2.53□□□□□ -2
Clk3O35492 Gm28831-201ENSMUST00000187739 315 ntBASIC2.53□□□□□ -2
Clk3O35492 Gm28200-201ENSMUST00000187778 315 ntBASIC2.53□□□□□ -2
Clk3O35492 Gm28752-201ENSMUST00000188340 315 ntBASIC2.53□□□□□ -2
Clk3O35492 Gm29378-201ENSMUST00000188723 315 ntBASIC2.53□□□□□ -2
Clk3O35492 Gm28569-201ENSMUST00000188748 315 ntBASIC2.53□□□□□ -2
Clk3O35492 Gm28120-201ENSMUST00000188812 315 ntBASIC2.53□□□□□ -2
Clk3O35492 Gm28369-201ENSMUST00000188993 315 ntBASIC2.53□□□□□ -2
Clk3O35492 Gm29037-201ENSMUST00000189092 313 ntBASIC2.53□□□□□ -2
Clk3O35492 Gm28909-201ENSMUST00000189406 315 ntBASIC2.53□□□□□ -2
Clk3O35492 Gm28861-201ENSMUST00000189681 315 ntBASIC2.53□□□□□ -2
Clk3O35492 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC2.53□□□□□ -2
Clk3O35492 Gm28848-201ENSMUST00000189984 168 ntBASIC2.53□□□□□ -2
Clk3O35492 Gm29180-201ENSMUST00000190003 315 ntBASIC2.53□□□□□ -2
Clk3O35492 Gm29575-201ENSMUST00000190597 315 ntBASIC2.53□□□□□ -2
Clk3O35492 Gm29469-201ENSMUST00000191448 315 ntBASIC2.53□□□□□ -2
Clk3O35492 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC2.53□□□□□ -2
Clk3O35492 Gm44794-201ENSMUST00000206550 411 ntBASIC2.53□□□□□ -2
Clk3O35492 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC2.53□□□□□ -2
Clk3O35492 Gm18346-201ENSMUST00000216782 325 ntBASIC2.53□□□□□ -2
Clk3O35492 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC2.53□□□□□ -2
Clk3O35492 Gm25199-201ENSMUST00000083095 104 ntBASIC2.53□□□□□ -2
Clk3O35492 Mir29b-2-201ENSMUST00000083478 81 ntBASIC2.53□□□□□ -2
Clk3O35492 Gm24764-201ENSMUST00000083686 199 ntBASIC2.53□□□□□ -2
Clk3O35492 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC2.53□□□□□ -2
Clk3O35492 Gm42801-201ENSMUST00000202562 2865 ntBASIC2.52□□□□□ -2.01
Clk3O35492 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Clk3O35492 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
Clk3O35492 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC2.52□□□□□ -2.01
Clk3O35492 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC2.52□□□□□ -2.01
Clk3O35492 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Clk3O35492 Gm15010-201ENSMUST00000117153 407 ntBASIC2.52□□□□□ -2.01
Clk3O35492 Gm23599-201ENSMUST00000157261 251 ntBASIC2.52□□□□□ -2.01
Clk3O35492 Gm22316-201ENSMUST00000158012 216 ntBASIC2.52□□□□□ -2.01
Clk3O35492 Gm17166-201ENSMUST00000172006 431 ntBASIC2.52□□□□□ -2.01
Clk3O35492 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC2.52□□□□□ -2.01
Clk3O35492 Gm34314-201ENSMUST00000203622 367 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 172 ms