Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Gm26148-201ENSMUST00000157430 68 ntBASIC3.38□□□□□ -1.87
Trim55G3X8Y1 Gm10067-201ENSMUST00000179462 348 ntBASIC3.38□□□□□ -1.87
Trim55G3X8Y1 Gm27796-201ENSMUST00000183863 261 ntBASIC3.38□□□□□ -1.87
Trim55G3X8Y1 Mir6405-201ENSMUST00000184584 124 ntBASIC3.38□□□□□ -1.87
Trim55G3X8Y1 Gm28002-201ENSMUST00000184832 100 ntBASIC3.38□□□□□ -1.87
Trim55G3X8Y1 Gm44476-201ENSMUST00000196225 91 ntBASIC3.38□□□□□ -1.87
Trim55G3X8Y1 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC3.38□□□□□ -1.87
Trim55G3X8Y1 AC141895.1-201ENSMUST00000218141 273 ntBASIC3.38□□□□□ -1.87
Trim55G3X8Y1 AC159709.1-201ENSMUST00000220445 349 ntBASIC3.38□□□□□ -1.87
Trim55G3X8Y1 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC3.38□□□□□ -1.87
Trim55G3X8Y1 Snord15a-201ENSMUST00000083888 148 ntBASIC3.38□□□□□ -1.87
Trim55G3X8Y1 Gm24817-201ENSMUST00000093672 105 ntBASIC3.38□□□□□ -1.87
Trim55G3X8Y1 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Trim55G3X8Y1 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Trim55G3X8Y1 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Trim55G3X8Y1 Gm38083-201ENSMUST00000194758 3498 ntBASIC3.37□□□□□ -1.87
Trim55G3X8Y1 Gm42888-201ENSMUST00000202425 4361 ntBASIC3.37□□□□□ -1.87
Trim55G3X8Y1 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Trim55G3X8Y1 Zfp709-201ENSMUST00000034259 2181 ntTSL 5 BASIC3.37□□□□□ -1.87
Trim55G3X8Y1 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC3.37□□□□□ -1.87
Trim55G3X8Y1 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
Trim55G3X8Y1 Gm24403-201ENSMUST00000104616 130 ntBASIC3.37□□□□□ -1.87
Trim55G3X8Y1 Gm12304-201ENSMUST00000120312 385 ntBASIC3.37□□□□□ -1.87
Trim55G3X8Y1 Gm14564-201ENSMUST00000122159 294 ntBASIC3.37□□□□□ -1.87
Trim55G3X8Y1 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC3.37□□□□□ -1.87
Trim55G3X8Y1 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC3.37□□□□□ -1.87
Trim55G3X8Y1 AC123709.1-201ENSMUST00000224848 345 ntBASIC3.37□□□□□ -1.87
Trim55G3X8Y1 Gm45884-201ENSMUST00000209540 3416 ntBASIC3.37□□□□□ -1.87
Trim55G3X8Y1 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Trim55G3X8Y1 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
Trim55G3X8Y1 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
Trim55G3X8Y1 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
Trim55G3X8Y1 Gm38286-201ENSMUST00000195128 3105 ntBASIC3.37□□□□□ -1.87
Trim55G3X8Y1 Gm18751-201ENSMUST00000185777 2013 ntBASIC3.36□□□□□ -1.87
Trim55G3X8Y1 Gm42768-201ENSMUST00000197734 2897 ntBASIC3.36□□□□□ -1.87
Trim55G3X8Y1 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
Trim55G3X8Y1 Gm24867-201ENSMUST00000104161 107 ntBASIC3.36□□□□□ -1.87
Trim55G3X8Y1 Snord72-201ENSMUST00000104549 81 ntBASIC3.36□□□□□ -1.87
Trim55G3X8Y1 Gm14838-201ENSMUST00000118913 248 ntBASIC3.36□□□□□ -1.87
Trim55G3X8Y1 Gm6829-201ENSMUST00000119858 360 ntBASIC3.36□□□□□ -1.87
Trim55G3X8Y1 Gm22792-201ENSMUST00000157225 133 ntBASIC3.36□□□□□ -1.87
Trim55G3X8Y1 Gm28020-201ENSMUST00000157739 67 ntBASIC3.36□□□□□ -1.87
Trim55G3X8Y1 Gm25654-201ENSMUST00000158467 88 ntBASIC3.36□□□□□ -1.87
Trim55G3X8Y1 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Trim55G3X8Y1 Gm38311-201ENSMUST00000192945 165 ntBASIC3.36□□□□□ -1.87
Trim55G3X8Y1 Gm34779-201ENSMUST00000210036 263 ntBASIC3.36□□□□□ -1.87
Trim55G3X8Y1 Gm24966-201ENSMUST00000082443 79 ntBASIC3.36□□□□□ -1.87
Trim55G3X8Y1 Gm22978-201ENSMUST00000082607 160 ntBASIC3.36□□□□□ -1.87
Trim55G3X8Y1 Gm24163-201ENSMUST00000093660 132 ntBASIC3.36□□□□□ -1.87
Trim55G3X8Y1 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
Trim55G3X8Y1 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Trim55G3X8Y1 Vmn2r66-201ENSMUST00000124773 2556 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
Trim55G3X8Y1 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
Trim55G3X8Y1 Gm45039-201ENSMUST00000209181 3477 ntBASIC3.35□□□□□ -1.87
Trim55G3X8Y1 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
Trim55G3X8Y1 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC3.35□□□□□ -1.87
Trim55G3X8Y1 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
Trim55G3X8Y1 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
Trim55G3X8Y1 Gm15282-201ENSMUST00000117707 300 ntBASIC3.35□□□□□ -1.87
Trim55G3X8Y1 Gm6071-201ENSMUST00000119561 440 ntBASIC3.35□□□□□ -1.87
Trim55G3X8Y1 Gm26277-201ENSMUST00000157097 152 ntBASIC3.35□□□□□ -1.87
Trim55G3X8Y1 Gm25625-201ENSMUST00000157221 96 ntBASIC3.35□□□□□ -1.87
Trim55G3X8Y1 Gm23671-201ENSMUST00000157472 103 ntBASIC3.35□□□□□ -1.87
Trim55G3X8Y1 Gm23545-201ENSMUST00000158205 104 ntBASIC3.35□□□□□ -1.87
Trim55G3X8Y1 Gm22889-201ENSMUST00000158639 58 ntBASIC3.35□□□□□ -1.87
Trim55G3X8Y1 Gm20399-201ENSMUST00000174652 132 ntBASIC3.35□□□□□ -1.87
Trim55G3X8Y1 Gm25457-201ENSMUST00000179509 107 ntBASIC3.35□□□□□ -1.87
Trim55G3X8Y1 Mir8103-201ENSMUST00000183945 107 ntBASIC3.35□□□□□ -1.87
Trim55G3X8Y1 Gm38171-201ENSMUST00000195716 478 ntTSL 3 BASIC3.35□□□□□ -1.87
Trim55G3X8Y1 Olfr439-ps1-201ENSMUST00000204679 307 ntBASIC3.35□□□□□ -1.87
Trim55G3X8Y1 Gm45543-201ENSMUST00000209327 88 ntBASIC3.35□□□□□ -1.87
Trim55G3X8Y1 Gm45907-201ENSMUST00000213023 193 ntBASIC3.35□□□□□ -1.87
Trim55G3X8Y1 AC188459.1-201ENSMUST00000216651 300 ntBASIC3.35□□□□□ -1.87
Trim55G3X8Y1 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC3.35□□□□□ -1.87
Trim55G3X8Y1 Gm24204-201ENSMUST00000082950 107 ntBASIC3.35□□□□□ -1.87
Trim55G3X8Y1 AC122850.1-201ENSMUST00000220380 5690 ntBASIC3.35□□□□□ -1.87
Trim55G3X8Y1 4932414N04Rik-201ENSMUST00000055930 3519 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
Trim55G3X8Y1 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Trim55G3X8Y1 Gm24126-201ENSMUST00000104111 106 ntBASIC3.34□□□□□ -1.87
Trim55G3X8Y1 Gm22713-201ENSMUST00000116895 130 ntBASIC3.34□□□□□ -1.87
Trim55G3X8Y1 Gm14073-201ENSMUST00000117344 381 ntBASIC3.34□□□□□ -1.87
Trim55G3X8Y1 Gm16171-201ENSMUST00000118004 324 ntBASIC3.34□□□□□ -1.87
Trim55G3X8Y1 Gm22883-201ENSMUST00000157376 106 ntBASIC3.34□□□□□ -1.87
Trim55G3X8Y1 Gm4479-201ENSMUST00000178807 171 ntBASIC3.34□□□□□ -1.87
Trim55G3X8Y1 Gm45288-201ENSMUST00000210236 151 ntBASIC3.34□□□□□ -1.87
Trim55G3X8Y1 Gm22169-201ENSMUST00000083229 107 ntBASIC3.34□□□□□ -1.87
Trim55G3X8Y1 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
Trim55G3X8Y1 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Trim55G3X8Y1 Gm42482-201ENSMUST00000198904 1947 ntBASIC3.33□□□□□ -1.88
Trim55G3X8Y1 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Trim55G3X8Y1 Gm12550-201ENSMUST00000118478 329 ntBASIC3.33□□□□□ -1.88
Trim55G3X8Y1 Gm12458-201ENSMUST00000119387 495 ntBASIC3.33□□□□□ -1.88
Trim55G3X8Y1 Gm25572-201ENSMUST00000157527 172 ntBASIC3.33□□□□□ -1.88
Trim55G3X8Y1 Gm22961-201ENSMUST00000157964 106 ntBASIC3.33□□□□□ -1.88
Trim55G3X8Y1 Gm2962-201ENSMUST00000159266 336 ntBASIC3.33□□□□□ -1.88
Trim55G3X8Y1 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
Trim55G3X8Y1 Gm22858-201ENSMUST00000174972 76 ntBASIC3.33□□□□□ -1.88
Trim55G3X8Y1 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC3.33□□□□□ -1.88
Trim55G3X8Y1 Gm23002-201ENSMUST00000179221 107 ntBASIC3.33□□□□□ -1.88
Trim55G3X8Y1 Gm27271-201ENSMUST00000183509 170 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 81.3 ms