Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm22005-201ENSMUST00000082795 141 ntBASIC0.61□□□□□ -2.31
Col6a4A2AX52 Mir429-201ENSMUST00000083493 83 ntBASIC0.61□□□□□ -2.31
Col6a4A2AX52 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
Col6a4A2AX52 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
Col6a4A2AX52 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
Col6a4A2AX52 Gm23656-201ENSMUST00000122626 112 ntBASIC0.6□□□□□ -2.31
Col6a4A2AX52 Mir1949-201ENSMUST00000157434 141 ntBASIC0.6□□□□□ -2.31
Col6a4A2AX52 Gm22074-201ENSMUST00000158595 113 ntBASIC0.6□□□□□ -2.31
Col6a4A2AX52 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
Col6a4A2AX52 Gm17631-201ENSMUST00000171980 69 ntAPPRIS P1 TSL 5 BASIC0.6□□□□□ -2.31
Col6a4A2AX52 Gm23648-201ENSMUST00000180301 107 ntBASIC0.6□□□□□ -2.31
Col6a4A2AX52 Gm18775-201ENSMUST00000190763 586 ntBASIC0.6□□□□□ -2.31
Col6a4A2AX52 Gm21089-201ENSMUST00000215843 325 ntBASIC0.6□□□□□ -2.31
Col6a4A2AX52 AC098718.1-201ENSMUST00000226166 175 ntBASIC0.6□□□□□ -2.31
Col6a4A2AX52 AC135292.1-201ENSMUST00000227665 204 ntBASIC0.6□□□□□ -2.31
Col6a4A2AX52 Gm23506-201ENSMUST00000083077 107 ntBASIC0.6□□□□□ -2.31
Col6a4A2AX52 Gm23848-201ENSMUST00000083826 106 ntBASIC0.6□□□□□ -2.31
Col6a4A2AX52 Gm15175-201ENSMUST00000117629 132 ntBASIC0.6□□□□□ -2.31
Col6a4A2AX52 Gm6272-201ENSMUST00000121256 171 ntBASIC0.6□□□□□ -2.31
Col6a4A2AX52 Gm12045-201ENSMUST00000122122 573 ntBASIC0.6□□□□□ -2.31
Col6a4A2AX52 Mir1904-201ENSMUST00000122702 80 ntBASIC0.6□□□□□ -2.31
Col6a4A2AX52 Gm16162-201ENSMUST00000162296 297 ntBASIC0.6□□□□□ -2.31
Col6a4A2AX52 Gm3027-201ENSMUST00000167579 451 ntBASIC0.6□□□□□ -2.31
Col6a4A2AX52 Gm25243-201ENSMUST00000174912 207 ntBASIC0.6□□□□□ -2.31
Col6a4A2AX52 Gm21978-201ENSMUST00000179696 377 ntBASIC0.6□□□□□ -2.31
Col6a4A2AX52 Gm37727-201ENSMUST00000191637 819 ntBASIC0.6□□□□□ -2.31
Col6a4A2AX52 Gm43026-201ENSMUST00000202972 325 ntBASIC0.6□□□□□ -2.31
Col6a4A2AX52 Gm44989-201ENSMUST00000204749 217 ntBASIC0.6□□□□□ -2.31
Col6a4A2AX52 Gm10297-201ENSMUST00000207136 651 ntBASIC0.6□□□□□ -2.31
Col6a4A2AX52 Gm45590-201ENSMUST00000209715 262 ntBASIC0.6□□□□□ -2.31
Col6a4A2AX52 CT030684.2-201ENSMUST00000228946 826 ntBASIC0.6□□□□□ -2.31
Col6a4A2AX52 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC0.59□□□□□ -2.31
Col6a4A2AX52 Mir883a-201ENSMUST00000104824 76 ntBASIC0.59□□□□□ -2.31
Col6a4A2AX52 Gm14624-201ENSMUST00000117746 192 ntBASIC0.59□□□□□ -2.31
Col6a4A2AX52 Gm24480-201ENSMUST00000157442 103 ntBASIC0.59□□□□□ -2.31
Col6a4A2AX52 Gm22663-201ENSMUST00000158721 102 ntBASIC0.59□□□□□ -2.31
Col6a4A2AX52 Gm16038-201ENSMUST00000159317 193 ntBASIC0.59□□□□□ -2.31
Col6a4A2AX52 Gm28412-201ENSMUST00000187243 177 ntBASIC0.59□□□□□ -2.31
Col6a4A2AX52 Gm29950-201ENSMUST00000195273 237 ntBASIC0.59□□□□□ -2.31
Col6a4A2AX52 Trdv3-201ENSMUST00000198551 309 ntBASIC0.59□□□□□ -2.31
Col6a4A2AX52 AC158597.1-201ENSMUST00000216234 150 ntBASIC0.59□□□□□ -2.31
Col6a4A2AX52 AC153522.1-201ENSMUST00000220047 1090 ntBASIC0.59□□□□□ -2.31
Col6a4A2AX52 AC123709.1-201ENSMUST00000224848 345 ntBASIC0.59□□□□□ -2.31
Col6a4A2AX52 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC0.59□□□□□ -2.31
Col6a4A2AX52 Gm25378-201ENSMUST00000104333 129 ntBASIC0.59□□□□□ -2.32
Col6a4A2AX52 Gm2003-201ENSMUST00000118537 636 ntBASIC0.59□□□□□ -2.32
Col6a4A2AX52 Gm22537-201ENSMUST00000158172 199 ntBASIC0.59□□□□□ -2.32
Col6a4A2AX52 Gm6660-201ENSMUST00000179149 468 ntBASIC0.59□□□□□ -2.32
Col6a4A2AX52 Gm38154-201ENSMUST00000195444 340 ntBASIC0.59□□□□□ -2.32
Col6a4A2AX52 Snhg1-208ENSMUST00000206029 408 ntTSL 3 BASIC0.59□□□□□ -2.32
Col6a4A2AX52 Gm45232-201ENSMUST00000207811 162 ntBASIC0.59□□□□□ -2.32
Col6a4A2AX52 AC159621.1-201ENSMUST00000223249 163 ntBASIC0.59□□□□□ -2.32
Col6a4A2AX52 AC147633.1-201ENSMUST00000225134 259 ntBASIC0.59□□□□□ -2.32
Col6a4A2AX52 CT025630.1-201ENSMUST00000227901 172 ntBASIC0.59□□□□□ -2.32
Col6a4A2AX52 Gm24208-201ENSMUST00000082783 135 ntBASIC0.59□□□□□ -2.32
Col6a4A2AX52 Snord118-201ENSMUST00000082965 135 ntBASIC0.59□□□□□ -2.32
Col6a4A2AX52 Snora3-201ENSMUST00000083082 132 ntBASIC0.59□□□□□ -2.32
Col6a4A2AX52 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC0.58□□□□□ -2.32
Col6a4A2AX52 Gm24582-201ENSMUST00000103967 103 ntBASIC0.58□□□□□ -2.32
Col6a4A2AX52 Gm22678-201ENSMUST00000116974 101 ntBASIC0.58□□□□□ -2.32
Col6a4A2AX52 Gm14358-201ENSMUST00000118458 403 ntBASIC0.58□□□□□ -2.32
Col6a4A2AX52 Gm14359-201ENSMUST00000118883 424 ntBASIC0.58□□□□□ -2.32
Col6a4A2AX52 Gm14913-201ENSMUST00000120011 1093 ntBASIC0.58□□□□□ -2.32
Col6a4A2AX52 Gm9498-201ENSMUST00000140849 291 ntBASIC0.58□□□□□ -2.32
Col6a4A2AX52 Gm14368-201ENSMUST00000145305 415 ntBASIC0.58□□□□□ -2.32
Col6a4A2AX52 Gm22944-201ENSMUST00000158662 133 ntBASIC0.58□□□□□ -2.32
Col6a4A2AX52 Gm17377-201ENSMUST00000165184 207 ntBASIC0.58□□□□□ -2.32
Col6a4A2AX52 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC0.58□□□□□ -2.32
Col6a4A2AX52 Mir3057-201ENSMUST00000175040 91 ntBASIC0.58□□□□□ -2.32
Col6a4A2AX52 Mir6389-201ENSMUST00000183661 102 ntBASIC0.58□□□□□ -2.32
Col6a4A2AX52 Mir7091-201ENSMUST00000184075 79 ntBASIC0.58□□□□□ -2.32
Col6a4A2AX52 Gm28666-201ENSMUST00000186649 274 ntBASIC0.58□□□□□ -2.32
Col6a4A2AX52 Gm37578-201ENSMUST00000192256 1177 ntBASIC0.58□□□□□ -2.32
Col6a4A2AX52 Gm43250-201ENSMUST00000196536 273 ntBASIC0.58□□□□□ -2.32
Col6a4A2AX52 Gm44524-201ENSMUST00000203899 271 ntBASIC0.58□□□□□ -2.32
Col6a4A2AX52 Gm23650-201ENSMUST00000083355 70 ntBASIC0.58□□□□□ -2.32
Col6a4A2AX52 Vmn1r85-201ENSMUST00000094829 927 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
Col6a4A2AX52 AC125532.1-201ENSMUST00000216210 2334 ntBASIC0.58□□□□□ -2.32
Col6a4A2AX52 AC121844.2-201ENSMUST00000219067 2066 ntBASIC0.58□□□□□ -2.32
Col6a4A2AX52 Gm24793-201ENSMUST00000104289 132 ntBASIC0.58□□□□□ -2.32
Col6a4A2AX52 Gm22543-201ENSMUST00000104347 94 ntBASIC0.58□□□□□ -2.32
Col6a4A2AX52 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC0.58□□□□□ -2.32
Col6a4A2AX52 Gm25544-201ENSMUST00000122676 120 ntBASIC0.58□□□□□ -2.32
Col6a4A2AX52 Gm22338-201ENSMUST00000157715 129 ntBASIC0.58□□□□□ -2.32
Col6a4A2AX52 Gm24837-201ENSMUST00000158683 81 ntBASIC0.58□□□□□ -2.32
Col6a4A2AX52 Ear-ps8-201ENSMUST00000161935 354 ntBASIC0.58□□□□□ -2.32
Col6a4A2AX52 Gm24168-201ENSMUST00000178825 107 ntBASIC0.58□□□□□ -2.32
Col6a4A2AX52 Gm29216-201ENSMUST00000187117 492 ntBASIC0.58□□□□□ -2.32
Col6a4A2AX52 Gm44137-201ENSMUST00000203670 367 ntBASIC0.58□□□□□ -2.32
Col6a4A2AX52 Gm45101-201ENSMUST00000208327 232 ntBASIC0.58□□□□□ -2.32
Col6a4A2AX52 AC112274.2-201ENSMUST00000218436 170 ntBASIC0.58□□□□□ -2.32
Col6a4A2AX52 CT030687.1-201ENSMUST00000221854 162 ntBASIC0.58□□□□□ -2.32
Col6a4A2AX52 Gm23645-201ENSMUST00000083228 108 ntBASIC0.58□□□□□ -2.32
Col6a4A2AX52 Gm26265-201ENSMUST00000083277 135 ntBASIC0.58□□□□□ -2.32
Col6a4A2AX52 Gm22974-201ENSMUST00000083301 103 ntBASIC0.58□□□□□ -2.32
Col6a4A2AX52 Mir196a-2-201ENSMUST00000083554 85 ntBASIC0.58□□□□□ -2.32
Col6a4A2AX52 Defb41-201ENSMUST00000088463 467 ntTSL 1 (best) BASIC0.58□□□□□ -2.32
Col6a4A2AX52 Gm23741-201ENSMUST00000097237 171 ntBASIC0.58□□□□□ -2.32
Col6a4A2AX52 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC0.57□□□□□ -2.32
Col6a4A2AX52 Gm37630-201ENSMUST00000194210 1456 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 76,532 protein–RNA pairs in 98.3 ms