Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Gm12255-201ENSMUST00000117184 284 ntBASIC1.5□□□□□ -2.17
Trbv20A0A0B4J1H5 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
Trbv20A0A0B4J1H5 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC1.5□□□□□ -2.17
Trbv20A0A0B4J1H5 Gm22891-201ENSMUST00000158641 164 ntBASIC1.5□□□□□ -2.17
Trbv20A0A0B4J1H5 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.5□□□□□ -2.17
Trbv20A0A0B4J1H5 Gm9830-201ENSMUST00000178509 357 ntBASIC1.5□□□□□ -2.17
Trbv20A0A0B4J1H5 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
Trbv20A0A0B4J1H5 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
Trbv20A0A0B4J1H5 Gm19694-201ENSMUST00000192364 505 ntBASIC1.5□□□□□ -2.17
Trbv20A0A0B4J1H5 Gm44666-201ENSMUST00000208544 391 ntBASIC1.5□□□□□ -2.17
Trbv20A0A0B4J1H5 Gm40810-201ENSMUST00000219149 253 ntBASIC1.5□□□□□ -2.17
Trbv20A0A0B4J1H5 AC116589.1-201ENSMUST00000220634 327 ntBASIC1.5□□□□□ -2.17
Trbv20A0A0B4J1H5 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Trbv20A0A0B4J1H5 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Trbv20A0A0B4J1H5 Gm37903-201ENSMUST00000192122 2381 ntBASIC1.5□□□□□ -2.17
Trbv20A0A0B4J1H5 Gm13581-201ENSMUST00000120675 278 ntBASIC1.49□□□□□ -2.17
Trbv20A0A0B4J1H5 Gm5396-201ENSMUST00000121222 532 ntBASIC1.49□□□□□ -2.17
Trbv20A0A0B4J1H5 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC1.49□□□□□ -2.17
Trbv20A0A0B4J1H5 Gm23589-201ENSMUST00000157660 105 ntBASIC1.49□□□□□ -2.17
Trbv20A0A0B4J1H5 Gm25384-201ENSMUST00000157807 105 ntBASIC1.49□□□□□ -2.17
Trbv20A0A0B4J1H5 Gm22666-201ENSMUST00000158717 164 ntBASIC1.49□□□□□ -2.17
Trbv20A0A0B4J1H5 Gm7953-201ENSMUST00000168278 469 ntBASIC1.49□□□□□ -2.17
Trbv20A0A0B4J1H5 Gm24333-201ENSMUST00000175101 84 ntBASIC1.49□□□□□ -2.17
Trbv20A0A0B4J1H5 Gm25994-201ENSMUST00000175392 101 ntBASIC1.49□□□□□ -2.17
Trbv20A0A0B4J1H5 Gm26335-201ENSMUST00000178449 107 ntBASIC1.49□□□□□ -2.17
Trbv20A0A0B4J1H5 Gm27313-201ENSMUST00000183500 142 ntBASIC1.49□□□□□ -2.17
Trbv20A0A0B4J1H5 Mir195b-201ENSMUST00000184814 97 ntBASIC1.49□□□□□ -2.17
Trbv20A0A0B4J1H5 Gm43583-201ENSMUST00000199235 303 ntBASIC1.49□□□□□ -2.17
Trbv20A0A0B4J1H5 Gm18696-201ENSMUST00000220103 274 ntBASIC1.49□□□□□ -2.17
Trbv20A0A0B4J1H5 CT009718.4-201ENSMUST00000221881 109 ntBASIC1.49□□□□□ -2.17
Trbv20A0A0B4J1H5 AC121942.2-201ENSMUST00000223824 600 ntBASIC1.49□□□□□ -2.17
Trbv20A0A0B4J1H5 AC129208.2-201ENSMUST00000228506 320 ntBASIC1.49□□□□□ -2.17
Trbv20A0A0B4J1H5 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
Trbv20A0A0B4J1H5 Gm44578-201ENSMUST00000207236 3835 ntBASIC1.49□□□□□ -2.17
Trbv20A0A0B4J1H5 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC1.48□□□□□ -2.17
Trbv20A0A0B4J1H5 Mir669p-2-201ENSMUST00000103868 87 ntBASIC1.48□□□□□ -2.17
Trbv20A0A0B4J1H5 Mir669p-1-201ENSMUST00000103884 87 ntBASIC1.48□□□□□ -2.17
Trbv20A0A0B4J1H5 Gm24403-201ENSMUST00000104616 130 ntBASIC1.48□□□□□ -2.17
Trbv20A0A0B4J1H5 Gm26474-201ENSMUST00000116762 122 ntBASIC1.48□□□□□ -2.17
Trbv20A0A0B4J1H5 Gm7164-201ENSMUST00000117503 450 ntBASIC1.48□□□□□ -2.17
Trbv20A0A0B4J1H5 Gm13672-201ENSMUST00000117554 459 ntBASIC1.48□□□□□ -2.17
Trbv20A0A0B4J1H5 Gm12748-201ENSMUST00000120763 504 ntBASIC1.48□□□□□ -2.17
Trbv20A0A0B4J1H5 Gm11786-201ENSMUST00000120799 155 ntBASIC1.48□□□□□ -2.17
Trbv20A0A0B4J1H5 Gm15281-201ENSMUST00000125181 351 ntBASIC1.48□□□□□ -2.17
Trbv20A0A0B4J1H5 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC1.48□□□□□ -2.17
Trbv20A0A0B4J1H5 Gm22654-201ENSMUST00000157874 105 ntBASIC1.48□□□□□ -2.17
Trbv20A0A0B4J1H5 Mir28b-201ENSMUST00000175399 80 ntBASIC1.48□□□□□ -2.17
Trbv20A0A0B4J1H5 Gm21729-201ENSMUST00000180058 664 ntBASIC1.48□□□□□ -2.17
Trbv20A0A0B4J1H5 Gm21853-201ENSMUST00000180071 664 ntBASIC1.48□□□□□ -2.17
Trbv20A0A0B4J1H5 Mir7047-201ENSMUST00000184595 64 ntBASIC1.48□□□□□ -2.17
Trbv20A0A0B4J1H5 Gm29495-201ENSMUST00000189319 664 ntBASIC1.48□□□□□ -2.17
Trbv20A0A0B4J1H5 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC1.48□□□□□ -2.17
Trbv20A0A0B4J1H5 Gm43245-201ENSMUST00000197603 468 ntBASIC1.48□□□□□ -2.17
Trbv20A0A0B4J1H5 Igkv11-118-201ENSMUST00000199448 346 ntBASIC1.48□□□□□ -2.17
Trbv20A0A0B4J1H5 Gm43914-201ENSMUST00000203592 594 ntBASIC1.48□□□□□ -2.17
Trbv20A0A0B4J1H5 AC147101.1-201ENSMUST00000217964 312 ntBASIC1.48□□□□□ -2.17
Trbv20A0A0B4J1H5 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC1.48□□□□□ -2.17
Trbv20A0A0B4J1H5 Gm24623-201ENSMUST00000082616 194 ntBASIC1.48□□□□□ -2.17
Trbv20A0A0B4J1H5 Gm26175-201ENSMUST00000083794 131 ntBASIC1.48□□□□□ -2.17
Trbv20A0A0B4J1H5 Snora33-201ENSMUST00000093556 129 ntBASIC1.48□□□□□ -2.17
Trbv20A0A0B4J1H5 Gm43046-201ENSMUST00000198771 2451 ntBASIC1.48□□□□□ -2.17
Trbv20A0A0B4J1H5 Gm37642-201ENSMUST00000193166 1735 ntBASIC1.48□□□□□ -2.17
Trbv20A0A0B4J1H5 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Trbv20A0A0B4J1H5 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Trbv20A0A0B4J1H5 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.47□□□□□ -2.17
Trbv20A0A0B4J1H5 Gm42942-201ENSMUST00000196086 1328 ntBASIC1.47□□□□□ -2.17
Trbv20A0A0B4J1H5 Gm14355-201ENSMUST00000117352 264 ntBASIC1.47□□□□□ -2.17
Trbv20A0A0B4J1H5 Gm12941-201ENSMUST00000117934 220 ntBASIC1.47□□□□□ -2.17
Trbv20A0A0B4J1H5 Gm14392-201ENSMUST00000120332 401 ntBASIC1.47□□□□□ -2.17
Trbv20A0A0B4J1H5 Gm14413-201ENSMUST00000122158 408 ntBASIC1.47□□□□□ -2.17
Trbv20A0A0B4J1H5 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC1.47□□□□□ -2.17
Trbv20A0A0B4J1H5 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC1.47□□□□□ -2.17
Trbv20A0A0B4J1H5 Gm25115-201ENSMUST00000157187 140 ntBASIC1.47□□□□□ -2.17
Trbv20A0A0B4J1H5 Gm24577-201ENSMUST00000158580 63 ntBASIC1.47□□□□□ -2.17
Trbv20A0A0B4J1H5 Gm24174-201ENSMUST00000158933 111 ntBASIC1.47□□□□□ -2.17
Trbv20A0A0B4J1H5 Ear-ps4-201ENSMUST00000166834 450 ntBASIC1.47□□□□□ -2.17
Trbv20A0A0B4J1H5 Gm21827-201ENSMUST00000178247 423 ntBASIC1.47□□□□□ -2.17
Trbv20A0A0B4J1H5 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC1.47□□□□□ -2.17
Trbv20A0A0B4J1H5 Gm27249-201ENSMUST00000185049 328 ntBASIC1.47□□□□□ -2.17
Trbv20A0A0B4J1H5 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC1.47□□□□□ -2.17
Trbv20A0A0B4J1H5 Gm28506-201ENSMUST00000189937 150 ntBASIC1.47□□□□□ -2.17
Trbv20A0A0B4J1H5 Gm37377-201ENSMUST00000191733 304 ntBASIC1.47□□□□□ -2.17
Trbv20A0A0B4J1H5 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Trbv20A0A0B4J1H5 Snord43-201ENSMUST00000199549 108 ntBASIC1.47□□□□□ -2.17
Trbv20A0A0B4J1H5 Gm45815-201ENSMUST00000220241 146 ntBASIC1.47□□□□□ -2.17
Trbv20A0A0B4J1H5 AC116589.9-201ENSMUST00000221462 908 ntBASIC1.47□□□□□ -2.17
Trbv20A0A0B4J1H5 AC166830.2-201ENSMUST00000225821 196 ntBASIC1.47□□□□□ -2.17
Trbv20A0A0B4J1H5 Ear14-201ENSMUST00000049559 468 ntBASIC1.47□□□□□ -2.17
Trbv20A0A0B4J1H5 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Trbv20A0A0B4J1H5 Olfr746-201ENSMUST00000080616 945 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Trbv20A0A0B4J1H5 Gm25589-201ENSMUST00000082502 166 ntBASIC1.47□□□□□ -2.17
Trbv20A0A0B4J1H5 Gm25130-201ENSMUST00000082650 156 ntBASIC1.47□□□□□ -2.17
Trbv20A0A0B4J1H5 Mir151-201ENSMUST00000083678 68 ntBASIC1.47□□□□□ -2.17
Trbv20A0A0B4J1H5 Gm24817-201ENSMUST00000093672 105 ntBASIC1.47□□□□□ -2.17
Trbv20A0A0B4J1H5 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
Trbv20A0A0B4J1H5 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
Trbv20A0A0B4J1H5 Gm13714-201ENSMUST00000117313 221 ntBASIC1.46□□□□□ -2.18
Trbv20A0A0B4J1H5 Gm25059-201ENSMUST00000157367 117 ntBASIC1.46□□□□□ -2.18
Trbv20A0A0B4J1H5 Gm25054-201ENSMUST00000157370 97 ntBASIC1.46□□□□□ -2.18
Trbv20A0A0B4J1H5 Mir1949-201ENSMUST00000157434 141 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 85 ms