Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Gm14359-201ENSMUST00000118883 424 ntBASIC0.39□□□□□ -2.35
Trav3-4A0A075B654 Gm14013-201ENSMUST00000119006 270 ntBASIC0.39□□□□□ -2.35
Trav3-4A0A075B654 Gm13603-201ENSMUST00000119404 83 ntBASIC0.39□□□□□ -2.35
Trav3-4A0A075B654 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC0.39□□□□□ -2.35
Trav3-4A0A075B654 Gm24385-201ENSMUST00000122694 350 ntBASIC0.39□□□□□ -2.35
Trav3-4A0A075B654 Gm15274-201ENSMUST00000131442 291 ntBASIC0.39□□□□□ -2.35
Trav3-4A0A075B654 Gm21979-201ENSMUST00000139887 291 ntBASIC0.39□□□□□ -2.35
Trav3-4A0A075B654 Gm9498-201ENSMUST00000140849 291 ntBASIC0.39□□□□□ -2.35
Trav3-4A0A075B654 Gm14368-201ENSMUST00000145305 415 ntBASIC0.39□□□□□ -2.35
Trav3-4A0A075B654 Gm15259-201ENSMUST00000151262 291 ntBASIC0.39□□□□□ -2.35
Trav3-4A0A075B654 Gm25392-201ENSMUST00000157335 297 ntBASIC0.39□□□□□ -2.35
Trav3-4A0A075B654 Gm26150-201ENSMUST00000157426 151 ntBASIC0.39□□□□□ -2.35
Trav3-4A0A075B654 Gm24401-201ENSMUST00000157868 91 ntBASIC0.39□□□□□ -2.35
Trav3-4A0A075B654 Gm25768-201ENSMUST00000158570 98 ntBASIC0.39□□□□□ -2.35
Trav3-4A0A075B654 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.39□□□□□ -2.35
Trav3-4A0A075B654 Gm24137-201ENSMUST00000180055 79 ntBASIC0.39□□□□□ -2.35
Trav3-4A0A075B654 Gm22391-201ENSMUST00000180356 79 ntBASIC0.39□□□□□ -2.35
Trav3-4A0A075B654 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
Trav3-4A0A075B654 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC0.39□□□□□ -2.35
Trav3-4A0A075B654 Mir7017-201ENSMUST00000184894 62 ntBASIC0.39□□□□□ -2.35
Trav3-4A0A075B654 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC0.39□□□□□ -2.35
Trav3-4A0A075B654 Gm37146-201ENSMUST00000192572 463 ntTSL 3 BASIC0.39□□□□□ -2.35
Trav3-4A0A075B654 Gm43035-201ENSMUST00000197626 517 ntBASIC0.39□□□□□ -2.35
Trav3-4A0A075B654 Gm35736-201ENSMUST00000203681 313 ntBASIC0.39□□□□□ -2.35
Trav3-4A0A075B654 Gm44254-201ENSMUST00000204184 322 ntBASIC0.39□□□□□ -2.35
Trav3-4A0A075B654 Gm44554-201ENSMUST00000208738 147 ntBASIC0.39□□□□□ -2.35
Trav3-4A0A075B654 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC0.39□□□□□ -2.35
Trav3-4A0A075B654 AC164086.1-201ENSMUST00000221038 289 ntBASIC0.39□□□□□ -2.35
Trav3-4A0A075B654 Gm25589-201ENSMUST00000082502 166 ntBASIC0.39□□□□□ -2.35
Trav3-4A0A075B654 Mir27b-201ENSMUST00000083541 73 ntBASIC0.39□□□□□ -2.35
Trav3-4A0A075B654 Gm12512-201ENSMUST00000119620 217 ntBASIC0.38□□□□□ -2.35
Trav3-4A0A075B654 Gm23829-201ENSMUST00000157392 270 ntBASIC0.38□□□□□ -2.35
Trav3-4A0A075B654 Rnu7-201ENSMUST00000158458 62 ntBASIC0.38□□□□□ -2.35
Trav3-4A0A075B654 Gm25365-201ENSMUST00000158852 121 ntBASIC0.38□□□□□ -2.35
Trav3-4A0A075B654 Gm16038-201ENSMUST00000159317 193 ntBASIC0.38□□□□□ -2.35
Trav3-4A0A075B654 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC0.38□□□□□ -2.35
Trav3-4A0A075B654 Gm26177-201ENSMUST00000178683 107 ntBASIC0.38□□□□□ -2.35
Trav3-4A0A075B654 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC0.38□□□□□ -2.35
Trav3-4A0A075B654 Mir7081-201ENSMUST00000184490 75 ntBASIC0.38□□□□□ -2.35
Trav3-4A0A075B654 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC0.38□□□□□ -2.35
Trav3-4A0A075B654 Gm36956-201ENSMUST00000193830 214 ntBASIC0.38□□□□□ -2.35
Trav3-4A0A075B654 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC0.38□□□□□ -2.35
Trav3-4A0A075B654 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC0.38□□□□□ -2.35
Trav3-4A0A075B654 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC0.38□□□□□ -2.35
Trav3-4A0A075B654 Gm25357-201ENSMUST00000082745 72 ntBASIC0.38□□□□□ -2.35
Trav3-4A0A075B654 Gm24536-201ENSMUST00000083144 107 ntBASIC0.38□□□□□ -2.35
Trav3-4A0A075B654 Snord33-201ENSMUST00000083694 84 ntBASIC0.38□□□□□ -2.35
Trav3-4A0A075B654 Gm24579-201ENSMUST00000103964 144 ntBASIC0.37□□□□□ -2.35
Trav3-4A0A075B654 Gm25832-201ENSMUST00000104140 130 ntBASIC0.37□□□□□ -2.35
Trav3-4A0A075B654 Gm11991-201ENSMUST00000119652 1074 ntBASIC0.37□□□□□ -2.35
Trav3-4A0A075B654 Gm23390-201ENSMUST00000157393 106 ntBASIC0.37□□□□□ -2.35
Trav3-4A0A075B654 Gm23317-201ENSMUST00000157999 129 ntBASIC0.37□□□□□ -2.35
Trav3-4A0A075B654 Gm25166-201ENSMUST00000158909 111 ntBASIC0.37□□□□□ -2.35
Trav3-4A0A075B654 Mir3061-201ENSMUST00000175129 91 ntBASIC0.37□□□□□ -2.35
Trav3-4A0A075B654 Mir7026-201ENSMUST00000184384 67 ntBASIC0.37□□□□□ -2.35
Trav3-4A0A075B654 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC0.37□□□□□ -2.35
Trav3-4A0A075B654 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
Trav3-4A0A075B654 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC0.37□□□□□ -2.35
Trav3-4A0A075B654 Gm24610-201ENSMUST00000083270 109 ntBASIC0.37□□□□□ -2.35
Trav3-4A0A075B654 Mir33-201ENSMUST00000083531 69 ntBASIC0.37□□□□□ -2.35
Trav3-4A0A075B654 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC0.36□□□□□ -2.35
Trav3-4A0A075B654 Gm12080-201ENSMUST00000119821 1883 ntBASIC0.36□□□□□ -2.35
Trav3-4A0A075B654 Gm14402-201ENSMUST00000122217 508 ntBASIC0.36□□□□□ -2.35
Trav3-4A0A075B654 Gm22477-201ENSMUST00000122569 316 ntBASIC0.36□□□□□ -2.35
Trav3-4A0A075B654 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC0.36□□□□□ -2.35
Trav3-4A0A075B654 Gm22556-201ENSMUST00000157803 100 ntBASIC0.36□□□□□ -2.35
Trav3-4A0A075B654 Gm15680-201ENSMUST00000161597 465 ntTSL 5 BASIC0.36□□□□□ -2.35
Trav3-4A0A075B654 Gm24638-201ENSMUST00000179807 132 ntBASIC0.36□□□□□ -2.35
Trav3-4A0A075B654 Gm27545-201ENSMUST00000184755 202 ntBASIC0.36□□□□□ -2.35
Trav3-4A0A075B654 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC0.36□□□□□ -2.35
Trav3-4A0A075B654 Gm44988-201ENSMUST00000203835 1161 ntBASIC0.36□□□□□ -2.35
Trav3-4A0A075B654 Gm18703-201ENSMUST00000215318 333 ntBASIC0.36□□□□□ -2.35
Trav3-4A0A075B654 Gm22302-201ENSMUST00000082657 106 ntBASIC0.36□□□□□ -2.35
Trav3-4A0A075B654 Gm25876-201ENSMUST00000104329 119 ntBASIC0.35□□□□□ -2.35
Trav3-4A0A075B654 Gm24836-201ENSMUST00000122609 108 ntBASIC0.35□□□□□ -2.35
Trav3-4A0A075B654 Gm23106-201ENSMUST00000157554 101 ntBASIC0.35□□□□□ -2.35
Trav3-4A0A075B654 Gm23114-201ENSMUST00000158478 117 ntBASIC0.35□□□□□ -2.35
Trav3-4A0A075B654 Mir3109-201ENSMUST00000175301 88 ntBASIC0.35□□□□□ -2.35
Trav3-4A0A075B654 Gm27760-201ENSMUST00000185048 114 ntBASIC0.35□□□□□ -2.35
Trav3-4A0A075B654 Gm27964-201ENSMUST00000185195 62 ntBASIC0.35□□□□□ -2.35
Trav3-4A0A075B654 Gm29513-201ENSMUST00000185741 202 ntBASIC0.35□□□□□ -2.35
Trav3-4A0A075B654 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC0.35□□□□□ -2.35
Trav3-4A0A075B654 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC0.35□□□□□ -2.35
Trav3-4A0A075B654 Gm36966-201ENSMUST00000192217 413 ntBASIC0.35□□□□□ -2.35
Trav3-4A0A075B654 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC0.35□□□□□ -2.35
Trav3-4A0A075B654 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC0.35□□□□□ -2.35
Trav3-4A0A075B654 AC110380.1-201ENSMUST00000226987 389 ntBASIC0.35□□□□□ -2.35
Trav3-4A0A075B654 Gm26263-201ENSMUST00000083281 164 ntBASIC0.35□□□□□ -2.35
Trav3-4A0A075B654 Gm26080-201ENSMUST00000104069 131 ntBASIC0.34□□□□□ -2.36
Trav3-4A0A075B654 Gm13396-201ENSMUST00000120617 271 ntBASIC0.34□□□□□ -2.36
Trav3-4A0A075B654 Gm24892-201ENSMUST00000122747 104 ntBASIC0.34□□□□□ -2.36
Trav3-4A0A075B654 Gm23391-201ENSMUST00000157579 104 ntBASIC0.34□□□□□ -2.36
Trav3-4A0A075B654 Gm24076-201ENSMUST00000158179 94 ntBASIC0.34□□□□□ -2.36
Trav3-4A0A075B654 Gm22522-201ENSMUST00000158271 151 ntBASIC0.34□□□□□ -2.36
Trav3-4A0A075B654 Gm25707-201ENSMUST00000175120 96 ntBASIC0.34□□□□□ -2.36
Trav3-4A0A075B654 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC0.34□□□□□ -2.36
Trav3-4A0A075B654 Gm25194-201ENSMUST00000177987 79 ntBASIC0.34□□□□□ -2.36
Trav3-4A0A075B654 Mir6364-201ENSMUST00000183396 86 ntBASIC0.34□□□□□ -2.36
Trav3-4A0A075B654 Mir7047-201ENSMUST00000184595 64 ntBASIC0.34□□□□□ -2.36
Trav3-4A0A075B654 Gm37319-201ENSMUST00000193500 636 ntBASIC0.34□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 133.3 ms