Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Gm43706-201ENSMUST00000198767 2652 ntBASIC0.47□□□□□ -2.33
Trav4-2A0A075B638 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC0.47□□□□□ -2.33
Trav4-2A0A075B638 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
Trav4-2A0A075B638 Gm25485-201ENSMUST00000104120 132 ntBASIC0.46□□□□□ -2.34
Trav4-2A0A075B638 Gm15807-201ENSMUST00000119880 1128 ntBASIC0.46□□□□□ -2.34
Trav4-2A0A075B638 Gm13992-201ENSMUST00000120558 156 ntBASIC0.46□□□□□ -2.34
Trav4-2A0A075B638 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC0.46□□□□□ -2.34
Trav4-2A0A075B638 Gm22027-201ENSMUST00000122737 127 ntBASIC0.46□□□□□ -2.34
Trav4-2A0A075B638 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC0.46□□□□□ -2.34
Trav4-2A0A075B638 Gm2020-201ENSMUST00000145242 579 ntBASIC0.46□□□□□ -2.34
Trav4-2A0A075B638 Gm25059-201ENSMUST00000157367 117 ntBASIC0.46□□□□□ -2.34
Trav4-2A0A075B638 Gm22233-201ENSMUST00000157464 114 ntBASIC0.46□□□□□ -2.34
Trav4-2A0A075B638 Gm23641-201ENSMUST00000157857 101 ntBASIC0.46□□□□□ -2.34
Trav4-2A0A075B638 Gm24808-201ENSMUST00000157993 118 ntBASIC0.46□□□□□ -2.34
Trav4-2A0A075B638 Gm26038-201ENSMUST00000158151 106 ntBASIC0.46□□□□□ -2.34
Trav4-2A0A075B638 Gm25868-201ENSMUST00000158253 114 ntBASIC0.46□□□□□ -2.34
Trav4-2A0A075B638 Gm29613-201ENSMUST00000185846 313 ntBASIC0.46□□□□□ -2.34
Trav4-2A0A075B638 Gm28666-201ENSMUST00000186649 274 ntBASIC0.46□□□□□ -2.34
Trav4-2A0A075B638 Gm29216-201ENSMUST00000187117 492 ntBASIC0.46□□□□□ -2.34
Trav4-2A0A075B638 Gm29544-201ENSMUST00000188860 313 ntBASIC0.46□□□□□ -2.34
Trav4-2A0A075B638 Gm28808-201ENSMUST00000190978 313 ntBASIC0.46□□□□□ -2.34
Trav4-2A0A075B638 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC0.46□□□□□ -2.34
Trav4-2A0A075B638 Gm37693-201ENSMUST00000194562 234 ntBASIC0.46□□□□□ -2.34
Trav4-2A0A075B638 Gm18160-201ENSMUST00000214279 827 ntBASIC0.46□□□□□ -2.34
Trav4-2A0A075B638 AC133156.1-202ENSMUST00000227284 363 ntBASIC0.46□□□□□ -2.34
Trav4-2A0A075B638 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
Trav4-2A0A075B638 Gm26446-201ENSMUST00000082455 103 ntBASIC0.46□□□□□ -2.34
Trav4-2A0A075B638 Gm25589-201ENSMUST00000082502 166 ntBASIC0.46□□□□□ -2.34
Trav4-2A0A075B638 Gm25698-201ENSMUST00000082897 107 ntBASIC0.46□□□□□ -2.34
Trav4-2A0A075B638 Gm25038-201ENSMUST00000082928 130 ntBASIC0.46□□□□□ -2.34
Trav4-2A0A075B638 Gm25128-201ENSMUST00000083339 76 ntBASIC0.46□□□□□ -2.34
Trav4-2A0A075B638 Gm14412-201ENSMUST00000108959 1581 ntAPPRIS P1 TSL 5 BASIC0.45□□□□□ -2.34
Trav4-2A0A075B638 Gm22785-201ENSMUST00000104087 132 ntBASIC0.45□□□□□ -2.34
Trav4-2A0A075B638 Gm24588-201ENSMUST00000116696 83 ntBASIC0.45□□□□□ -2.34
Trav4-2A0A075B638 Gm15010-201ENSMUST00000117153 407 ntBASIC0.45□□□□□ -2.34
Trav4-2A0A075B638 Gm12449-201ENSMUST00000117572 234 ntBASIC0.45□□□□□ -2.34
Trav4-2A0A075B638 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC0.45□□□□□ -2.34
Trav4-2A0A075B638 Gm14887-201ENSMUST00000119522 663 ntBASIC0.45□□□□□ -2.34
Trav4-2A0A075B638 Gm14551-201ENSMUST00000120802 256 ntBASIC0.45□□□□□ -2.34
Trav4-2A0A075B638 Gm23184-201ENSMUST00000122594 131 ntBASIC0.45□□□□□ -2.34
Trav4-2A0A075B638 Gm16265-201ENSMUST00000134558 108 ntBASIC0.45□□□□□ -2.34
Trav4-2A0A075B638 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC0.45□□□□□ -2.34
Trav4-2A0A075B638 Gm22038-201ENSMUST00000157277 242 ntBASIC0.45□□□□□ -2.34
Trav4-2A0A075B638 Gm23829-201ENSMUST00000157392 270 ntBASIC0.45□□□□□ -2.34
Trav4-2A0A075B638 Gm26150-201ENSMUST00000157426 151 ntBASIC0.45□□□□□ -2.34
Trav4-2A0A075B638 Gm23068-201ENSMUST00000158239 293 ntBASIC0.45□□□□□ -2.34
Trav4-2A0A075B638 Gm26405-201ENSMUST00000158495 100 ntBASIC0.45□□□□□ -2.34
Trav4-2A0A075B638 Gm17052-201ENSMUST00000165496 289 ntBASIC0.45□□□□□ -2.34
Trav4-2A0A075B638 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC0.45□□□□□ -2.34
Trav4-2A0A075B638 Gm25874-201ENSMUST00000178030 79 ntBASIC0.45□□□□□ -2.34
Trav4-2A0A075B638 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC0.45□□□□□ -2.34
Trav4-2A0A075B638 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC0.45□□□□□ -2.34
Trav4-2A0A075B638 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC0.45□□□□□ -2.34
Trav4-2A0A075B638 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC0.45□□□□□ -2.34
Trav4-2A0A075B638 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC0.45□□□□□ -2.34
Trav4-2A0A075B638 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC0.45□□□□□ -2.34
Trav4-2A0A075B638 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC0.45□□□□□ -2.34
Trav4-2A0A075B638 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC0.45□□□□□ -2.34
Trav4-2A0A075B638 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC0.45□□□□□ -2.34
Trav4-2A0A075B638 Topbp1-ps1-201ENSMUST00000187120 184 ntBASIC0.45□□□□□ -2.34
Trav4-2A0A075B638 Gm28299-201ENSMUST00000189908 339 ntBASIC0.45□□□□□ -2.34
Trav4-2A0A075B638 Gm38149-201ENSMUST00000191943 339 ntBASIC0.45□□□□□ -2.34
Trav4-2A0A075B638 Gm43004-201ENSMUST00000201872 703 ntBASIC0.45□□□□□ -2.34
Trav4-2A0A075B638 Olfr454-ps1-201ENSMUST00000205206 348 ntBASIC0.45□□□□□ -2.34
Trav4-2A0A075B638 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC0.45□□□□□ -2.34
Trav4-2A0A075B638 Gm45878-201ENSMUST00000211839 241 ntBASIC0.45□□□□□ -2.34
Trav4-2A0A075B638 AC126691.1-201ENSMUST00000226534 202 ntBASIC0.45□□□□□ -2.34
Trav4-2A0A075B638 Snord1a-201ENSMUST00000083160 74 ntBASIC0.45□□□□□ -2.34
Trav4-2A0A075B638 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC0.45□□□□□ -2.34
Trav4-2A0A075B638 Gm24282-201ENSMUST00000104232 66 ntBASIC0.44□□□□□ -2.34
Trav4-2A0A075B638 Gm14417-201ENSMUST00000120036 1074 ntBASIC0.44□□□□□ -2.34
Trav4-2A0A075B638 Gm16412-201ENSMUST00000121602 273 ntBASIC0.44□□□□□ -2.34
Trav4-2A0A075B638 Gm24598-201ENSMUST00000122510 74 ntBASIC0.44□□□□□ -2.34
Trav4-2A0A075B638 Gm25544-201ENSMUST00000122676 120 ntBASIC0.44□□□□□ -2.34
Trav4-2A0A075B638 Gm24385-201ENSMUST00000122694 350 ntBASIC0.44□□□□□ -2.34
Trav4-2A0A075B638 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC0.44□□□□□ -2.34
Trav4-2A0A075B638 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC0.44□□□□□ -2.34
Trav4-2A0A075B638 Gm24221-201ENSMUST00000158833 313 ntBASIC0.44□□□□□ -2.34
Trav4-2A0A075B638 Ccdc152-201ENSMUST00000165386 798 ntAPPRIS P1 TSL 5 BASIC0.44□□□□□ -2.34
Trav4-2A0A075B638 Gm24713-201ENSMUST00000178850 107 ntBASIC0.44□□□□□ -2.34
Trav4-2A0A075B638 Gm25448-201ENSMUST00000180065 107 ntBASIC0.44□□□□□ -2.34
Trav4-2A0A075B638 Gm27974-201ENSMUST00000183415 105 ntBASIC0.44□□□□□ -2.34
Trav4-2A0A075B638 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC0.44□□□□□ -2.34
Trav4-2A0A075B638 Mir6962-201ENSMUST00000199512 63 ntBASIC0.44□□□□□ -2.34
Trav4-2A0A075B638 Gm23370-201ENSMUST00000199545 130 ntBASIC0.44□□□□□ -2.34
Trav4-2A0A075B638 Gm31520-201ENSMUST00000203048 733 ntBASIC0.44□□□□□ -2.34
Trav4-2A0A075B638 Gm8125-201ENSMUST00000216602 738 ntBASIC0.44□□□□□ -2.34
Trav4-2A0A075B638 Gm22302-201ENSMUST00000082657 106 ntBASIC0.44□□□□□ -2.34
Trav4-2A0A075B638 Gm26074-201ENSMUST00000104063 129 ntBASIC0.43□□□□□ -2.34
Trav4-2A0A075B638 Gm8858-201ENSMUST00000118259 342 ntBASIC0.43□□□□□ -2.34
Trav4-2A0A075B638 Anp32-ps-201ENSMUST00000118265 388 ntBASIC0.43□□□□□ -2.34
Trav4-2A0A075B638 Gm11363-201ENSMUST00000121672 548 ntBASIC0.43□□□□□ -2.34
Trav4-2A0A075B638 Gm24840-201ENSMUST00000122603 147 ntBASIC0.43□□□□□ -2.34
Trav4-2A0A075B638 Gm24668-201ENSMUST00000158935 104 ntBASIC0.43□□□□□ -2.34
Trav4-2A0A075B638 Gm26652-202ENSMUST00000181672 475 ntBASIC0.43□□□□□ -2.34
Trav4-2A0A075B638 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC0.43□□□□□ -2.34
Trav4-2A0A075B638 Gm17911-201ENSMUST00000210806 877 ntBASIC0.43□□□□□ -2.34
Trav4-2A0A075B638 AC134335.1-201ENSMUST00000227626 329 ntBASIC0.43□□□□□ -2.34
Trav4-2A0A075B638 Gm26224-201ENSMUST00000082506 80 ntBASIC0.43□□□□□ -2.34
Trav4-2A0A075B638 Snord118-201ENSMUST00000082965 135 ntBASIC0.43□□□□□ -2.34
Retrieved 100 of 76,532 protein–RNA pairs in 10.8 ms