Protein–RNA interactions for Protein: A0A075B5Z4

Trav1, T cell receptor alpha variable 1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav1A0A075B5Z4 Gm14307-201ENSMUST00000118930 291 ntBASIC1.97□□□□□ -2.09
Trav1A0A075B5Z4 Gm13396-201ENSMUST00000120617 271 ntBASIC1.97□□□□□ -2.09
Trav1A0A075B5Z4 Gm14980-201ENSMUST00000121247 736 ntBASIC1.97□□□□□ -2.09
Trav1A0A075B5Z4 Gm26255-201ENSMUST00000122492 103 ntBASIC1.97□□□□□ -2.09
Trav1A0A075B5Z4 Gm14297-201ENSMUST00000129110 291 ntBASIC1.97□□□□□ -2.09
Trav1A0A075B5Z4 Gm6956-201ENSMUST00000134724 546 ntBASIC1.97□□□□□ -2.09
Trav1A0A075B5Z4 Rpl31-ps14-201ENSMUST00000143596 378 ntBASIC1.97□□□□□ -2.09
Trav1A0A075B5Z4 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC1.97□□□□□ -2.09
Trav1A0A075B5Z4 Gm26099-201ENSMUST00000157248 109 ntBASIC1.97□□□□□ -2.09
Trav1A0A075B5Z4 Gm24237-201ENSMUST00000157790 132 ntBASIC1.97□□□□□ -2.09
Trav1A0A075B5Z4 Gm25460-201ENSMUST00000157954 127 ntBASIC1.97□□□□□ -2.09
Trav1A0A075B5Z4 Gm22382-201ENSMUST00000158185 130 ntBASIC1.97□□□□□ -2.09
Trav1A0A075B5Z4 Gm22308-201ENSMUST00000177609 107 ntBASIC1.97□□□□□ -2.09
Trav1A0A075B5Z4 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC1.97□□□□□ -2.09
Trav1A0A075B5Z4 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC1.97□□□□□ -2.09
Trav1A0A075B5Z4 Gm25671-201ENSMUST00000178612 105 ntBASIC1.97□□□□□ -2.09
Trav1A0A075B5Z4 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC1.97□□□□□ -2.09
Trav1A0A075B5Z4 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC1.97□□□□□ -2.09
Trav1A0A075B5Z4 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC1.97□□□□□ -2.09
Trav1A0A075B5Z4 Gm23307-201ENSMUST00000179167 105 ntBASIC1.97□□□□□ -2.09
Trav1A0A075B5Z4 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC1.97□□□□□ -2.09
Trav1A0A075B5Z4 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC1.97□□□□□ -2.09
Trav1A0A075B5Z4 Gm25286-201ENSMUST00000179790 105 ntBASIC1.97□□□□□ -2.09
Trav1A0A075B5Z4 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC1.97□□□□□ -2.09
Trav1A0A075B5Z4 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Trav1A0A075B5Z4 Gm28647-201ENSMUST00000188416 197 ntBASIC1.97□□□□□ -2.09
Trav1A0A075B5Z4 Gm20257-202ENSMUST00000188643 130 ntBASIC1.97□□□□□ -2.09
Trav1A0A075B5Z4 Gm28717-201ENSMUST00000189950 315 ntBASIC1.97□□□□□ -2.09
Trav1A0A075B5Z4 Gm20885-201ENSMUST00000190192 654 ntBASIC1.97□□□□□ -2.09
Trav1A0A075B5Z4 Trbv18-201ENSMUST00000194256 294 ntBASIC1.97□□□□□ -2.09
Trav1A0A075B5Z4 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC1.97□□□□□ -2.09
Trav1A0A075B5Z4 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC1.97□□□□□ -2.09
Trav1A0A075B5Z4 Gm43680-201ENSMUST00000199466 340 ntBASIC1.97□□□□□ -2.09
Trav1A0A075B5Z4 AC155839.1-201ENSMUST00000200105 147 ntBASIC1.97□□□□□ -2.09
Trav1A0A075B5Z4 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC1.97□□□□□ -2.09
Trav1A0A075B5Z4 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC1.97□□□□□ -2.09
Trav1A0A075B5Z4 Gm10088-201ENSMUST00000074116 423 ntBASIC1.97□□□□□ -2.09
Trav1A0A075B5Z4 Gm22997-201ENSMUST00000082845 107 ntBASIC1.97□□□□□ -2.09
Trav1A0A075B5Z4 Gm25512-201ENSMUST00000083863 107 ntBASIC1.97□□□□□ -2.09
Trav1A0A075B5Z4 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC1.97□□□□□ -2.09
Trav1A0A075B5Z4 Gm18751-201ENSMUST00000185777 2013 ntBASIC1.96□□□□□ -2.09
Trav1A0A075B5Z4 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Trav1A0A075B5Z4 AC132221.1-201ENSMUST00000220577 3841 ntBASIC1.96□□□□□ -2.1
Trav1A0A075B5Z4 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Trav1A0A075B5Z4 Cyp3a59-201ENSMUST00000035571 1990 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
Trav1A0A075B5Z4 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
Trav1A0A075B5Z4 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
Trav1A0A075B5Z4 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Trav1A0A075B5Z4 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
Trav1A0A075B5Z4 Gm22021-201ENSMUST00000104353 107 ntBASIC1.96□□□□□ -2.1
Trav1A0A075B5Z4 Gm14678-201ENSMUST00000121396 482 ntBASIC1.96□□□□□ -2.1
Trav1A0A075B5Z4 Gm25781-201ENSMUST00000122527 84 ntBASIC1.96□□□□□ -2.1
Trav1A0A075B5Z4 AI847159-201ENSMUST00000137728 305 ntTSL 2 BASIC1.96□□□□□ -2.1
Trav1A0A075B5Z4 Gm22491-201ENSMUST00000157190 102 ntBASIC1.96□□□□□ -2.1
Trav1A0A075B5Z4 Gm27396-201ENSMUST00000157708 58 ntBASIC1.96□□□□□ -2.1
Trav1A0A075B5Z4 Gm23476-201ENSMUST00000158881 274 ntBASIC1.96□□□□□ -2.1
Trav1A0A075B5Z4 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Trav1A0A075B5Z4 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC1.96□□□□□ -2.1
Trav1A0A075B5Z4 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
Trav1A0A075B5Z4 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC1.96□□□□□ -2.1
Trav1A0A075B5Z4 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC1.96□□□□□ -2.1
Trav1A0A075B5Z4 Mir3068-202ENSMUST00000197755 79 ntBASIC1.96□□□□□ -2.1
Trav1A0A075B5Z4 Gm43587-201ENSMUST00000199590 204 ntBASIC1.96□□□□□ -2.1
Trav1A0A075B5Z4 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC1.96□□□□□ -2.1
Trav1A0A075B5Z4 AC122465.2-201ENSMUST00000221774 354 ntBASIC1.96□□□□□ -2.1
Trav1A0A075B5Z4 Gm7065-201ENSMUST00000222150 474 ntBASIC1.96□□□□□ -2.1
Trav1A0A075B5Z4 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC1.96□□□□□ -2.1
Trav1A0A075B5Z4 AC122418.1-201ENSMUST00000225012 511 ntBASIC1.96□□□□□ -2.1
Trav1A0A075B5Z4 Snord68-201ENSMUST00000082516 86 ntBASIC1.96□□□□□ -2.1
Trav1A0A075B5Z4 Gm25079-201ENSMUST00000082529 203 ntBASIC1.96□□□□□ -2.1
Trav1A0A075B5Z4 Gm23453-201ENSMUST00000083326 106 ntBASIC1.96□□□□□ -2.1
Trav1A0A075B5Z4 Gm42770-201ENSMUST00000199657 4155 ntBASIC1.95□□□□□ -2.1
Trav1A0A075B5Z4 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
Trav1A0A075B5Z4 Gm24338-201ENSMUST00000104205 127 ntBASIC1.95□□□□□ -2.1
Trav1A0A075B5Z4 Gm13518-201ENSMUST00000120018 233 ntBASIC1.95□□□□□ -2.1
Trav1A0A075B5Z4 Gm14402-201ENSMUST00000122217 508 ntBASIC1.95□□□□□ -2.1
Trav1A0A075B5Z4 Gm11254-201ENSMUST00000122368 653 ntBASIC1.95□□□□□ -2.1
Trav1A0A075B5Z4 Gm26214-201ENSMUST00000158581 107 ntBASIC1.95□□□□□ -2.1
Trav1A0A075B5Z4 Gm9830-201ENSMUST00000178509 357 ntBASIC1.95□□□□□ -2.1
Trav1A0A075B5Z4 Gm27410-201ENSMUST00000183851 115 ntBASIC1.95□□□□□ -2.1
Trav1A0A075B5Z4 Gm27761-201ENSMUST00000184091 131 ntBASIC1.95□□□□□ -2.1
Trav1A0A075B5Z4 Gm40810-201ENSMUST00000219149 253 ntBASIC1.95□□□□□ -2.1
Trav1A0A075B5Z4 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC1.95□□□□□ -2.1
Trav1A0A075B5Z4 AL590614.1-201ENSMUST00000226037 268 ntBASIC1.95□□□□□ -2.1
Trav1A0A075B5Z4 Gm26111-201ENSMUST00000083969 106 ntBASIC1.95□□□□□ -2.1
Trav1A0A075B5Z4 Gm15088-201ENSMUST00000117973 1508 ntBASIC1.95□□□□□ -2.1
Trav1A0A075B5Z4 Gm15098-201ENSMUST00000119036 1508 ntBASIC1.95□□□□□ -2.1
Trav1A0A075B5Z4 Gm43373-201ENSMUST00000202552 2870 ntBASIC1.95□□□□□ -2.1
Trav1A0A075B5Z4 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
Trav1A0A075B5Z4 Gm23202-201ENSMUST00000104376 129 ntBASIC1.94□□□□□ -2.1
Trav1A0A075B5Z4 Gm13439-201ENSMUST00000117541 409 ntBASIC1.94□□□□□ -2.1
Trav1A0A075B5Z4 Gm25945-201ENSMUST00000122484 135 ntBASIC1.94□□□□□ -2.1
Trav1A0A075B5Z4 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC1.94□□□□□ -2.1
Trav1A0A075B5Z4 Gm25454-201ENSMUST00000157947 315 ntBASIC1.94□□□□□ -2.1
Trav1A0A075B5Z4 Gm23033-201ENSMUST00000157996 134 ntBASIC1.94□□□□□ -2.1
Trav1A0A075B5Z4 Gm22434-201ENSMUST00000158549 122 ntBASIC1.94□□□□□ -2.1
Trav1A0A075B5Z4 Gm23342-201ENSMUST00000158958 115 ntBASIC1.94□□□□□ -2.1
Trav1A0A075B5Z4 Gm22500-201ENSMUST00000158982 99 ntBASIC1.94□□□□□ -2.1
Trav1A0A075B5Z4 Mir6346-201ENSMUST00000183982 81 ntBASIC1.94□□□□□ -2.1
Trav1A0A075B5Z4 Mir7016-201ENSMUST00000184308 72 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 102.1 ms