Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
H2afb3S4R1G7 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC2.74□□□□□ -1.97
H2afb3S4R1G7 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
H2afb3S4R1G7 Ighv16-1-201ENSMUST00000103470 299 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
H2afb3S4R1G7 Mir297a-2-201ENSMUST00000103795 90 ntBASIC2.74□□□□□ -1.97
H2afb3S4R1G7 Gm23988-201ENSMUST00000117034 122 ntBASIC2.74□□□□□ -1.97
H2afb3S4R1G7 Gm15282-201ENSMUST00000117707 300 ntBASIC2.74□□□□□ -1.97
H2afb3S4R1G7 Gm12276-201ENSMUST00000121709 301 ntBASIC2.74□□□□□ -1.97
H2afb3S4R1G7 Gm12071-201ENSMUST00000121968 469 ntBASIC2.74□□□□□ -1.97
H2afb3S4R1G7 Gm7209-201ENSMUST00000122339 333 ntBASIC2.74□□□□□ -1.97
H2afb3S4R1G7 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC2.74□□□□□ -1.97
H2afb3S4R1G7 Gm22911-201ENSMUST00000177920 107 ntBASIC2.74□□□□□ -1.97
H2afb3S4R1G7 Gm27803-201ENSMUST00000183763 119 ntBASIC2.74□□□□□ -1.97
H2afb3S4R1G7 Mir8103-201ENSMUST00000183945 107 ntBASIC2.74□□□□□ -1.97
H2afb3S4R1G7 Gm27545-201ENSMUST00000184755 202 ntBASIC2.74□□□□□ -1.97
H2afb3S4R1G7 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC2.74□□□□□ -1.97
H2afb3S4R1G7 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
H2afb3S4R1G7 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC2.74□□□□□ -1.97
H2afb3S4R1G7 AC153564.2-201ENSMUST00000219464 273 ntBASIC2.74□□□□□ -1.97
H2afb3S4R1G7 S100z-201ENSMUST00000022186 399 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
H2afb3S4R1G7 CT009604.2-201ENSMUST00000225531 377 ntBASIC2.74□□□□□ -1.97
H2afb3S4R1G7 Gm24147-201ENSMUST00000082763 144 ntBASIC2.74□□□□□ -1.97
H2afb3S4R1G7 Mir103-2-201ENSMUST00000083629 86 ntBASIC2.74□□□□□ -1.97
H2afb3S4R1G7 Gm26327-201ENSMUST00000093724 111 ntBASIC2.74□□□□□ -1.97
H2afb3S4R1G7 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
H2afb3S4R1G7 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
H2afb3S4R1G7 Gm43016-201ENSMUST00000196628 3150 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
H2afb3S4R1G7 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
H2afb3S4R1G7 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
H2afb3S4R1G7 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
H2afb3S4R1G7 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
H2afb3S4R1G7 Gm43879-201ENSMUST00000203811 3760 ntBASIC2.74□□□□□ -1.97
H2afb3S4R1G7 AC117226.1-201ENSMUST00000221635 3737 ntBASIC2.73□□□□□ -1.97
H2afb3S4R1G7 Gm44049-201ENSMUST00000204905 2984 ntBASIC2.73□□□□□ -1.97
H2afb3S4R1G7 Gm38083-201ENSMUST00000194758 3498 ntBASIC2.73□□□□□ -1.97
H2afb3S4R1G7 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
H2afb3S4R1G7 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
H2afb3S4R1G7 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
H2afb3S4R1G7 Gm24423-201ENSMUST00000101982 106 ntBASIC2.73□□□□□ -1.97
H2afb3S4R1G7 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
H2afb3S4R1G7 Gm23609-201ENSMUST00000104542 127 ntBASIC2.73□□□□□ -1.97
H2afb3S4R1G7 Gm13729-201ENSMUST00000120328 406 ntBASIC2.73□□□□□ -1.97
H2afb3S4R1G7 Gm12723-201ENSMUST00000120700 451 ntBASIC2.73□□□□□ -1.97
H2afb3S4R1G7 Mup-ps20-201ENSMUST00000121132 389 ntBASIC2.73□□□□□ -1.97
H2afb3S4R1G7 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC2.73□□□□□ -1.97
H2afb3S4R1G7 4930517O19Rik-202ENSMUST00000145018 571 ntTSL 3 BASIC2.73□□□□□ -1.97
H2afb3S4R1G7 Gm22961-201ENSMUST00000157964 106 ntBASIC2.73□□□□□ -1.97
H2afb3S4R1G7 Gm26287-201ENSMUST00000158887 81 ntBASIC2.73□□□□□ -1.97
H2afb3S4R1G7 Ear-ps4-201ENSMUST00000166834 450 ntBASIC2.73□□□□□ -1.97
H2afb3S4R1G7 H2al1k-201ENSMUST00000178196 510 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
H2afb3S4R1G7 Gm27698-201ENSMUST00000184060 249 ntBASIC2.73□□□□□ -1.97
H2afb3S4R1G7 Gm27869-201ENSMUST00000184327 122 ntBASIC2.73□□□□□ -1.97
H2afb3S4R1G7 Gm27893-201ENSMUST00000184408 194 ntBASIC2.73□□□□□ -1.97
H2afb3S4R1G7 Gm37089-201ENSMUST00000195616 129 ntBASIC2.73□□□□□ -1.97
H2afb3S4R1G7 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC2.73□□□□□ -1.97
H2afb3S4R1G7 Gm45430-201ENSMUST00000211276 260 ntTSL 5 BASIC2.73□□□□□ -1.97
H2afb3S4R1G7 AC155712.1-201ENSMUST00000219704 160 ntBASIC2.73□□□□□ -1.97
H2afb3S4R1G7 AC173115.1-201ENSMUST00000220835 211 ntBASIC2.73□□□□□ -1.97
H2afb3S4R1G7 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC2.73□□□□□ -1.97
H2afb3S4R1G7 AC115735.2-201ENSMUST00000227135 351 ntBASIC2.73□□□□□ -1.97
H2afb3S4R1G7 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
H2afb3S4R1G7 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
H2afb3S4R1G7 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC2.73□□□□□ -1.97
H2afb3S4R1G7 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
H2afb3S4R1G7 Tlr3-205ENSMUST00000209772 4096 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
H2afb3S4R1G7 Gm23841-201ENSMUST00000116951 114 ntBASIC2.72□□□□□ -1.97
H2afb3S4R1G7 Gm14846-201ENSMUST00000121868 216 ntBASIC2.72□□□□□ -1.97
H2afb3S4R1G7 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC2.72□□□□□ -1.97
H2afb3S4R1G7 Gm22336-201ENSMUST00000157719 107 ntBASIC2.72□□□□□ -1.97
H2afb3S4R1G7 Gm24726-201ENSMUST00000158232 121 ntBASIC2.72□□□□□ -1.97
H2afb3S4R1G7 Gm26061-201ENSMUST00000175584 108 ntBASIC2.72□□□□□ -1.97
H2afb3S4R1G7 Mir6371-201ENSMUST00000184470 111 ntBASIC2.72□□□□□ -1.97
H2afb3S4R1G7 Gm5329-201ENSMUST00000186898 463 ntBASIC2.72□□□□□ -1.97
H2afb3S4R1G7 Gm29657-201ENSMUST00000189807 342 ntBASIC2.72□□□□□ -1.97
H2afb3S4R1G7 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC2.72□□□□□ -1.97
H2afb3S4R1G7 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC2.72□□□□□ -1.97
H2afb3S4R1G7 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
H2afb3S4R1G7 Olfr1317-201ENSMUST00000060098 951 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
H2afb3S4R1G7 Mir137-201ENSMUST00000083635 73 ntBASIC2.72□□□□□ -1.97
H2afb3S4R1G7 Gm37645-201ENSMUST00000194285 3556 ntBASIC2.71□□□□□ -1.97
H2afb3S4R1G7 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
H2afb3S4R1G7 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC2.71□□□□□ -1.98
H2afb3S4R1G7 Gm22784-201ENSMUST00000104088 132 ntBASIC2.71□□□□□ -1.98
H2afb3S4R1G7 Mdga2-203ENSMUST00000113942 423 ntBASIC2.71□□□□□ -1.98
H2afb3S4R1G7 Gm12797-201ENSMUST00000118645 273 ntBASIC2.71□□□□□ -1.98
H2afb3S4R1G7 Gm14838-201ENSMUST00000118913 248 ntBASIC2.71□□□□□ -1.98
H2afb3S4R1G7 Gm22956-201ENSMUST00000122520 80 ntBASIC2.71□□□□□ -1.98
H2afb3S4R1G7 Gm26020-201ENSMUST00000122729 183 ntBASIC2.71□□□□□ -1.98
H2afb3S4R1G7 Gm22842-201ENSMUST00000157709 118 ntBASIC2.71□□□□□ -1.98
H2afb3S4R1G7 Gm23640-201ENSMUST00000157860 104 ntBASIC2.71□□□□□ -1.98
H2afb3S4R1G7 Gm6660-201ENSMUST00000179149 468 ntBASIC2.71□□□□□ -1.98
H2afb3S4R1G7 Gm29104-201ENSMUST00000186304 222 ntBASIC2.71□□□□□ -1.98
H2afb3S4R1G7 Gm28453-203ENSMUST00000187041 189 ntBASIC2.71□□□□□ -1.98
H2afb3S4R1G7 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC2.71□□□□□ -1.98
H2afb3S4R1G7 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC2.71□□□□□ -1.98
H2afb3S4R1G7 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC2.71□□□□□ -1.98
H2afb3S4R1G7 Gm5899-201ENSMUST00000071770 270 ntBASIC2.71□□□□□ -1.98
H2afb3S4R1G7 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
H2afb3S4R1G7 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
H2afb3S4R1G7 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms