Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
H2afb1S4R1E0 Gm15314-201ENSMUST00000120740 1887 ntBASIC2.2□□□□□ -2.06
H2afb1S4R1E0 Gm23142-201ENSMUST00000101848 105 ntBASIC2.2□□□□□ -2.06
H2afb1S4R1E0 Gm26240-201ENSMUST00000101893 105 ntBASIC2.2□□□□□ -2.06
H2afb1S4R1E0 Gm24582-201ENSMUST00000103967 103 ntBASIC2.2□□□□□ -2.06
H2afb1S4R1E0 Gm22021-201ENSMUST00000104353 107 ntBASIC2.2□□□□□ -2.06
H2afb1S4R1E0 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC2.2□□□□□ -2.06
H2afb1S4R1E0 Gm6574-201ENSMUST00000120037 362 ntBASIC2.2□□□□□ -2.06
H2afb1S4R1E0 Gm14845-201ENSMUST00000121259 306 ntBASIC2.2□□□□□ -2.06
H2afb1S4R1E0 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC2.2□□□□□ -2.06
H2afb1S4R1E0 Gm26256-201ENSMUST00000122499 186 ntBASIC2.2□□□□□ -2.06
H2afb1S4R1E0 Gm22491-201ENSMUST00000157190 102 ntBASIC2.2□□□□□ -2.06
H2afb1S4R1E0 Gm24481-201ENSMUST00000157210 102 ntBASIC2.2□□□□□ -2.06
H2afb1S4R1E0 Gm22843-201ENSMUST00000157710 134 ntBASIC2.2□□□□□ -2.06
H2afb1S4R1E0 Gm24212-201ENSMUST00000158258 132 ntBASIC2.2□□□□□ -2.06
H2afb1S4R1E0 Gm26402-201ENSMUST00000158499 113 ntBASIC2.2□□□□□ -2.06
H2afb1S4R1E0 Mir7578-201ENSMUST00000183455 82 ntBASIC2.2□□□□□ -2.06
H2afb1S4R1E0 Gm28008-201ENSMUST00000184021 186 ntBASIC2.2□□□□□ -2.06
H2afb1S4R1E0 Gm20058-201ENSMUST00000186939 284 ntBASIC2.2□□□□□ -2.06
H2afb1S4R1E0 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
H2afb1S4R1E0 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
H2afb1S4R1E0 Mir3069-201ENSMUST00000198802 65 ntBASIC2.2□□□□□ -2.06
H2afb1S4R1E0 Igkv1-108-201ENSMUST00000198926 298 ntBASIC2.2□□□□□ -2.06
H2afb1S4R1E0 Gm43264-201ENSMUST00000202284 325 ntBASIC2.2□□□□□ -2.06
H2afb1S4R1E0 AC132437.1-201ENSMUST00000218308 320 ntBASIC2.2□□□□□ -2.06
H2afb1S4R1E0 Gm33654-201ENSMUST00000221704 215 ntBASIC2.2□□□□□ -2.06
H2afb1S4R1E0 Gm21937-201ENSMUST00000222825 218 ntBASIC2.2□□□□□ -2.06
H2afb1S4R1E0 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.2□□□□□ -2.06
H2afb1S4R1E0 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.2□□□□□ -2.06
H2afb1S4R1E0 Gm42482-201ENSMUST00000198904 1947 ntBASIC2.19□□□□□ -2.06
H2afb1S4R1E0 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
H2afb1S4R1E0 Gm15088-201ENSMUST00000117973 1508 ntBASIC2.19□□□□□ -2.06
H2afb1S4R1E0 Gm15098-201ENSMUST00000119036 1508 ntBASIC2.19□□□□□ -2.06
H2afb1S4R1E0 Gm18360-201ENSMUST00000173327 1524 ntBASIC2.19□□□□□ -2.06
H2afb1S4R1E0 Gm12235-201ENSMUST00000118596 170 ntBASIC2.19□□□□□ -2.06
H2afb1S4R1E0 Gm14980-201ENSMUST00000121247 736 ntBASIC2.19□□□□□ -2.06
H2afb1S4R1E0 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC2.19□□□□□ -2.06
H2afb1S4R1E0 Gm13853-201ENSMUST00000155496 557 ntTSL 3 BASIC2.19□□□□□ -2.06
H2afb1S4R1E0 Gm23642-201ENSMUST00000157858 258 ntBASIC2.19□□□□□ -2.06
H2afb1S4R1E0 Gm25373-201ENSMUST00000158156 115 ntBASIC2.19□□□□□ -2.06
H2afb1S4R1E0 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC2.19□□□□□ -2.06
H2afb1S4R1E0 Gm9830-201ENSMUST00000178509 357 ntBASIC2.19□□□□□ -2.06
H2afb1S4R1E0 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
H2afb1S4R1E0 Mir7013-201ENSMUST00000183540 72 ntBASIC2.19□□□□□ -2.06
H2afb1S4R1E0 Gm44881-201ENSMUST00000205425 367 ntBASIC2.19□□□□□ -2.06
H2afb1S4R1E0 Gm44844-201ENSMUST00000207242 336 ntBASIC2.19□□□□□ -2.06
H2afb1S4R1E0 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC2.19□□□□□ -2.06
H2afb1S4R1E0 Gm19118-201ENSMUST00000222554 98 ntBASIC2.19□□□□□ -2.06
H2afb1S4R1E0 AC154472.1-201ENSMUST00000222663 236 ntTSL 3 BASIC2.19□□□□□ -2.06
H2afb1S4R1E0 Olfr197-201ENSMUST00000080031 926 ntBASIC2.19□□□□□ -2.06
H2afb1S4R1E0 Gm22249-201ENSMUST00000082485 136 ntBASIC2.19□□□□□ -2.06
H2afb1S4R1E0 Gm25796-201ENSMUST00000082645 163 ntBASIC2.19□□□□□ -2.06
H2afb1S4R1E0 Gm25937-201ENSMUST00000083912 107 ntBASIC2.19□□□□□ -2.06
H2afb1S4R1E0 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC2.19□□□□□ -2.06
H2afb1S4R1E0 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
H2afb1S4R1E0 Cyp3a41a-201ENSMUST00000094111 2060 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
H2afb1S4R1E0 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.19□□□□□ -2.06
H2afb1S4R1E0 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.19□□□□□ -2.06
H2afb1S4R1E0 Olfr1318-202ENSMUST00000214063 3556 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
H2afb1S4R1E0 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
H2afb1S4R1E0 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
H2afb1S4R1E0 Mir682-201ENSMUST00000102281 96 ntBASIC2.18□□□□□ -2.06
H2afb1S4R1E0 Gm22497-201ENSMUST00000104499 131 ntBASIC2.18□□□□□ -2.06
H2afb1S4R1E0 Mir669i-201ENSMUST00000117007 127 ntBASIC2.18□□□□□ -2.06
H2afb1S4R1E0 Gm13378-201ENSMUST00000117483 336 ntBASIC2.18□□□□□ -2.06
H2afb1S4R1E0 Gm13439-201ENSMUST00000117541 409 ntBASIC2.18□□□□□ -2.06
H2afb1S4R1E0 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC2.18□□□□□ -2.06
H2afb1S4R1E0 Gm12837-201ENSMUST00000120131 373 ntBASIC2.18□□□□□ -2.06
H2afb1S4R1E0 Gm12071-201ENSMUST00000121968 469 ntBASIC2.18□□□□□ -2.06
H2afb1S4R1E0 Gm22479-201ENSMUST00000122566 81 ntBASIC2.18□□□□□ -2.06
H2afb1S4R1E0 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC2.18□□□□□ -2.06
H2afb1S4R1E0 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC2.18□□□□□ -2.06
H2afb1S4R1E0 Gm27505-201ENSMUST00000185071 110 ntBASIC2.18□□□□□ -2.06
H2afb1S4R1E0 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
H2afb1S4R1E0 Gm37313-201ENSMUST00000191673 290 ntBASIC2.18□□□□□ -2.06
H2afb1S4R1E0 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2.18□□□□□ -2.06
H2afb1S4R1E0 Gm43739-201ENSMUST00000198294 307 ntBASIC2.18□□□□□ -2.06
H2afb1S4R1E0 Gm45452-201ENSMUST00000210905 177 ntBASIC2.18□□□□□ -2.06
H2afb1S4R1E0 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
H2afb1S4R1E0 Gm8031-201ENSMUST00000213430 626 ntBASIC2.18□□□□□ -2.06
H2afb1S4R1E0 Olfr1064-ps1-201ENSMUST00000213670 600 ntBASIC2.18□□□□□ -2.06
H2afb1S4R1E0 AC124537.1-201ENSMUST00000222890 159 ntBASIC2.18□□□□□ -2.06
H2afb1S4R1E0 Gm22622-201ENSMUST00000082870 129 ntBASIC2.18□□□□□ -2.06
H2afb1S4R1E0 Gm26494-201ENSMUST00000083154 143 ntBASIC2.18□□□□□ -2.06
H2afb1S4R1E0 Gm24493-201ENSMUST00000083805 143 ntBASIC2.18□□□□□ -2.06
H2afb1S4R1E0 Gm23345-201ENSMUST00000083817 150 ntBASIC2.18□□□□□ -2.06
H2afb1S4R1E0 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
H2afb1S4R1E0 Gm12513-201ENSMUST00000118617 352 ntBASIC2.17□□□□□ -2.06
H2afb1S4R1E0 Gm12897-201ENSMUST00000120341 250 ntBASIC2.17□□□□□ -2.06
H2afb1S4R1E0 Defa-ps13-201ENSMUST00000120695 204 ntBASIC2.17□□□□□ -2.06
H2afb1S4R1E0 Gm12924-201ENSMUST00000121747 318 ntBASIC2.17□□□□□ -2.06
H2afb1S4R1E0 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC2.17□□□□□ -2.06
H2afb1S4R1E0 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC2.17□□□□□ -2.06
H2afb1S4R1E0 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC2.17□□□□□ -2.06
H2afb1S4R1E0 Gm25153-201ENSMUST00000157118 156 ntBASIC2.17□□□□□ -2.06
H2afb1S4R1E0 Gm26102-201ENSMUST00000157251 284 ntBASIC2.17□□□□□ -2.06
H2afb1S4R1E0 Gm24958-201ENSMUST00000158009 97 ntBASIC2.17□□□□□ -2.06
H2afb1S4R1E0 Gm24056-201ENSMUST00000158617 146 ntBASIC2.17□□□□□ -2.06
H2afb1S4R1E0 Gm26400-201ENSMUST00000175012 85 ntBASIC2.17□□□□□ -2.06
H2afb1S4R1E0 Gm25748-201ENSMUST00000175487 70 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms