Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Gm25294-201ENSMUST00000122791 104 ntBASIC0.83□□□□□ -2.28
Scn8aQ9WTU3 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC0.83□□□□□ -2.28
Scn8aQ9WTU3 Gm38044-201ENSMUST00000192964 487 ntBASIC0.83□□□□□ -2.28
Scn8aQ9WTU3 Gm42976-201ENSMUST00000200313 222 ntBASIC0.83□□□□□ -2.28
Scn8aQ9WTU3 Gm30484-201ENSMUST00000200327 449 ntTSL 5 BASIC0.83□□□□□ -2.28
Scn8aQ9WTU3 Gm25128-201ENSMUST00000083339 76 ntBASIC0.83□□□□□ -2.28
Scn8aQ9WTU3 Gm23741-201ENSMUST00000097237 171 ntBASIC0.83□□□□□ -2.28
Scn8aQ9WTU3 AC125532.1-201ENSMUST00000216210 2334 ntBASIC0.82□□□□□ -2.28
Scn8aQ9WTU3 Gm19428-201ENSMUST00000220512 1995 ntBASIC0.82□□□□□ -2.28
Scn8aQ9WTU3 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
Scn8aQ9WTU3 Gm13885-201ENSMUST00000117569 187 ntBASIC0.82□□□□□ -2.28
Scn8aQ9WTU3 Gm27878-201ENSMUST00000184000 106 ntBASIC0.82□□□□□ -2.28
Scn8aQ9WTU3 Gm27245-201ENSMUST00000184385 376 ntBASIC0.82□□□□□ -2.28
Scn8aQ9WTU3 Gm42958-201ENSMUST00000197595 318 ntBASIC0.82□□□□□ -2.28
Scn8aQ9WTU3 Gm44324-201ENSMUST00000198517 135 ntBASIC0.82□□□□□ -2.28
Scn8aQ9WTU3 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC0.82□□□□□ -2.28
Scn8aQ9WTU3 AL669916.3-201ENSMUST00000213855 94 ntBASIC0.82□□□□□ -2.28
Scn8aQ9WTU3 AL669916.6-201ENSMUST00000214610 94 ntBASIC0.82□□□□□ -2.28
Scn8aQ9WTU3 AL669916.4-201ENSMUST00000215976 94 ntBASIC0.82□□□□□ -2.28
Scn8aQ9WTU3 AL669916.1-201ENSMUST00000217640 94 ntBASIC0.82□□□□□ -2.28
Scn8aQ9WTU3 AC101677.1-201ENSMUST00000218590 158 ntBASIC0.82□□□□□ -2.28
Scn8aQ9WTU3 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
Scn8aQ9WTU3 Gm25079-201ENSMUST00000082529 203 ntBASIC0.82□□□□□ -2.28
Scn8aQ9WTU3 Gm24610-201ENSMUST00000083270 109 ntBASIC0.82□□□□□ -2.28
Scn8aQ9WTU3 Gm13992-201ENSMUST00000120558 156 ntBASIC0.81□□□□□ -2.28
Scn8aQ9WTU3 Gm23754-201ENSMUST00000157576 63 ntBASIC0.81□□□□□ -2.28
Scn8aQ9WTU3 Gm24573-201ENSMUST00000175499 112 ntBASIC0.81□□□□□ -2.28
Scn8aQ9WTU3 Gm29460-201ENSMUST00000188607 714 ntBASIC0.81□□□□□ -2.28
Scn8aQ9WTU3 Olfr989-ps1-201ENSMUST00000214405 912 ntBASIC0.81□□□□□ -2.28
Scn8aQ9WTU3 Gm25495-201ENSMUST00000104431 131 ntBASIC0.81□□□□□ -2.28
Scn8aQ9WTU3 Mir883a-201ENSMUST00000104824 76 ntBASIC0.81□□□□□ -2.28
Scn8aQ9WTU3 Gm12417-201ENSMUST00000119153 403 ntBASIC0.81□□□□□ -2.28
Scn8aQ9WTU3 Gm23355-201ENSMUST00000177614 107 ntBASIC0.81□□□□□ -2.28
Scn8aQ9WTU3 Snord116l14-201ENSMUST00000179875 94 ntBASIC0.81□□□□□ -2.28
Scn8aQ9WTU3 Gm45375-201ENSMUST00000210338 280 ntBASIC0.81□□□□□ -2.28
Scn8aQ9WTU3 AC158597.1-201ENSMUST00000216234 150 ntBASIC0.81□□□□□ -2.28
Scn8aQ9WTU3 Gm5955-201ENSMUST00000222712 219 ntBASIC0.81□□□□□ -2.28
Scn8aQ9WTU3 AC173482.2-201ENSMUST00000224044 750 ntBASIC0.81□□□□□ -2.28
Scn8aQ9WTU3 Gm23721-201ENSMUST00000083005 107 ntBASIC0.81□□□□□ -2.28
Scn8aQ9WTU3 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
Scn8aQ9WTU3 Gm14558-201ENSMUST00000117458 381 ntBASIC0.8□□□□□ -2.28
Scn8aQ9WTU3 Gm15861-201ENSMUST00000120979 339 ntBASIC0.8□□□□□ -2.28
Scn8aQ9WTU3 Mir1967-201ENSMUST00000157789 82 ntBASIC0.8□□□□□ -2.28
Scn8aQ9WTU3 Mir3471-1-201ENSMUST00000175139 131 ntBASIC0.8□□□□□ -2.28
Scn8aQ9WTU3 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC0.8□□□□□ -2.28
Scn8aQ9WTU3 Gm10717-207ENSMUST00000179264 672 ntTSL 5 BASIC0.8□□□□□ -2.28
Scn8aQ9WTU3 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC0.8□□□□□ -2.28
Scn8aQ9WTU3 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC0.8□□□□□ -2.28
Scn8aQ9WTU3 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC0.8□□□□□ -2.28
Scn8aQ9WTU3 Gm18774-201ENSMUST00000218269 601 ntBASIC0.8□□□□□ -2.28
Scn8aQ9WTU3 AC152951.1-201ENSMUST00000218907 266 ntBASIC0.8□□□□□ -2.28
Scn8aQ9WTU3 AC159621.1-201ENSMUST00000223249 163 ntBASIC0.8□□□□□ -2.28
Scn8aQ9WTU3 Ear14-201ENSMUST00000049559 468 ntBASIC0.8□□□□□ -2.28
Scn8aQ9WTU3 Gm22061-201ENSMUST00000082557 107 ntBASIC0.8□□□□□ -2.28
Scn8aQ9WTU3 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
Scn8aQ9WTU3 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC0.8□□□□□ -2.28
Scn8aQ9WTU3 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
Scn8aQ9WTU3 Gm15167-201ENSMUST00000121997 187 ntBASIC0.79□□□□□ -2.28
Scn8aQ9WTU3 Gm24598-201ENSMUST00000122510 74 ntBASIC0.79□□□□□ -2.28
Scn8aQ9WTU3 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC0.79□□□□□ -2.28
Scn8aQ9WTU3 Gm23196-201ENSMUST00000158806 107 ntBASIC0.79□□□□□ -2.28
Scn8aQ9WTU3 Gm36966-201ENSMUST00000192217 413 ntBASIC0.79□□□□□ -2.28
Scn8aQ9WTU3 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC0.79□□□□□ -2.28
Scn8aQ9WTU3 AC138290.2-201ENSMUST00000218822 369 ntBASIC0.79□□□□□ -2.28
Scn8aQ9WTU3 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC0.79□□□□□ -2.28
Scn8aQ9WTU3 AC113031.5-201ENSMUST00000227116 606 ntBASIC0.79□□□□□ -2.28
Scn8aQ9WTU3 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC0.79□□□□□ -2.28
Scn8aQ9WTU3 Gm23735-201ENSMUST00000082551 134 ntBASIC0.79□□□□□ -2.28
Scn8aQ9WTU3 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC0.79□□□□□ -2.28
Scn8aQ9WTU3 Gm23126-201ENSMUST00000104260 134 ntBASIC0.79□□□□□ -2.28
Scn8aQ9WTU3 Gm13153-201ENSMUST00000120969 637 ntBASIC0.79□□□□□ -2.28
Scn8aQ9WTU3 Gm6568-201ENSMUST00000122274 697 ntBASIC0.79□□□□□ -2.28
Scn8aQ9WTU3 Gm22217-201ENSMUST00000157556 313 ntBASIC0.79□□□□□ -2.28
Scn8aQ9WTU3 Gm22944-201ENSMUST00000158662 133 ntBASIC0.79□□□□□ -2.28
Scn8aQ9WTU3 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC0.79□□□□□ -2.28
Scn8aQ9WTU3 Gm34015-201ENSMUST00000194908 451 ntBASIC0.79□□□□□ -2.28
Scn8aQ9WTU3 Gm14445-201ENSMUST00000117051 1484 ntBASIC0.79□□□□□ -2.28
Scn8aQ9WTU3 Gm23331-201ENSMUST00000157423 108 ntBASIC0.78□□□□□ -2.28
Scn8aQ9WTU3 Vmn1r-ps150-201ENSMUST00000176659 736 ntBASIC0.78□□□□□ -2.28
Scn8aQ9WTU3 Gm22583-201ENSMUST00000178031 107 ntBASIC0.78□□□□□ -2.28
Scn8aQ9WTU3 Gm25933-201ENSMUST00000178943 108 ntBASIC0.78□□□□□ -2.28
Scn8aQ9WTU3 Gm18356-201ENSMUST00000185677 623 ntBASIC0.78□□□□□ -2.28
Scn8aQ9WTU3 Gm34139-201ENSMUST00000196166 294 ntBASIC0.78□□□□□ -2.28
Scn8aQ9WTU3 Gm43531-201ENSMUST00000200676 1114 ntBASIC0.78□□□□□ -2.28
Scn8aQ9WTU3 Gm44128-201ENSMUST00000204909 219 ntBASIC0.78□□□□□ -2.28
Scn8aQ9WTU3 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC0.78□□□□□ -2.28
Scn8aQ9WTU3 AC112274.2-201ENSMUST00000218436 170 ntBASIC0.78□□□□□ -2.28
Scn8aQ9WTU3 Platr25-208ENSMUST00000222602 939 ntBASIC0.78□□□□□ -2.28
Scn8aQ9WTU3 Gm23429-201ENSMUST00000122486 149 ntBASIC0.77□□□□□ -2.29
Scn8aQ9WTU3 Gm22482-201ENSMUST00000122563 359 ntBASIC0.77□□□□□ -2.29
Scn8aQ9WTU3 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
Scn8aQ9WTU3 Gm24480-201ENSMUST00000157442 103 ntBASIC0.77□□□□□ -2.29
Scn8aQ9WTU3 Gm22075-201ENSMUST00000158599 192 ntBASIC0.77□□□□□ -2.29
Scn8aQ9WTU3 Gm27517-201ENSMUST00000184347 236 ntBASIC0.77□□□□□ -2.29
Scn8aQ9WTU3 Gm29600-201ENSMUST00000188687 377 ntBASIC0.77□□□□□ -2.29
Scn8aQ9WTU3 Gm44654-201ENSMUST00000208052 329 ntBASIC0.77□□□□□ -2.29
Scn8aQ9WTU3 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC0.77□□□□□ -2.29
Scn8aQ9WTU3 Mir29b-2-201ENSMUST00000083478 81 ntBASIC0.77□□□□□ -2.29
Scn8aQ9WTU3 Mir221-201ENSMUST00000083488 95 ntBASIC0.77□□□□□ -2.29
Scn8aQ9WTU3 Gm23347-201ENSMUST00000083823 82 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 76,532 protein–RNA pairs in 123 ms