Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Gm11874-201ENSMUST00000117437 130 ntBASIC4.02□□□□□ -1.77
Nubp1Q9R060 Gm13756-201ENSMUST00000117618 222 ntBASIC4.02□□□□□ -1.77
Nubp1Q9R060 Gm11982-201ENSMUST00000121480 314 ntBASIC4.02□□□□□ -1.77
Nubp1Q9R060 Gm16327-201ENSMUST00000137146 228 ntBASIC4.02□□□□□ -1.77
Nubp1Q9R060 Gm16533-201ENSMUST00000140035 228 ntBASIC4.02□□□□□ -1.77
Nubp1Q9R060 Gm24747-201ENSMUST00000157835 87 ntBASIC4.02□□□□□ -1.77
Nubp1Q9R060 Gm24944-201ENSMUST00000158330 128 ntBASIC4.02□□□□□ -1.77
Nubp1Q9R060 Gm22708-201ENSMUST00000158987 103 ntBASIC4.02□□□□□ -1.77
Nubp1Q9R060 Mir5134-201ENSMUST00000175529 78 ntBASIC4.02□□□□□ -1.77
Nubp1Q9R060 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC4.02□□□□□ -1.77
Nubp1Q9R060 Gm29406-201ENSMUST00000186400 235 ntTSL 5 BASIC4.02□□□□□ -1.77
Nubp1Q9R060 Gm37733-201ENSMUST00000195478 2962 ntBASIC4.02□□□□□ -1.77
Nubp1Q9R060 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC4.02□□□□□ -1.77
Nubp1Q9R060 Gm43264-201ENSMUST00000202284 325 ntBASIC4.02□□□□□ -1.77
Nubp1Q9R060 Gm43901-201ENSMUST00000203247 453 ntBASIC4.02□□□□□ -1.77
Nubp1Q9R060 Gm10192-201ENSMUST00000086672 327 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
Nubp1Q9R060 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Nubp1Q9R060 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Nubp1Q9R060 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Nubp1Q9R060 Olfr1093-202ENSMUST00000213354 2240 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
Nubp1Q9R060 Gm42448-201ENSMUST00000197122 2644 ntBASIC4.02□□□□□ -1.77
Nubp1Q9R060 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
Nubp1Q9R060 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Nubp1Q9R060 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
Nubp1Q9R060 Klhl13-205ENSMUST00000115319 3349 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
Nubp1Q9R060 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Nubp1Q9R060 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Nubp1Q9R060 Vmn2r82-201ENSMUST00000170596 3045 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Nubp1Q9R060 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Nubp1Q9R060 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Nubp1Q9R060 Olfr577-203ENSMUST00000215237 3144 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Nubp1Q9R060 Zfp273-203ENSMUST00000181391 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Nubp1Q9R060 Gm25169-201ENSMUST00000104190 129 ntBASIC4.01□□□□□ -1.77
Nubp1Q9R060 Gm12039-201ENSMUST00000118219 180 ntBASIC4.01□□□□□ -1.77
Nubp1Q9R060 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC4.01□□□□□ -1.77
Nubp1Q9R060 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC4.01□□□□□ -1.77
Nubp1Q9R060 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Nubp1Q9R060 Gm22816-201ENSMUST00000157450 117 ntBASIC4.01□□□□□ -1.77
Nubp1Q9R060 Gm26404-201ENSMUST00000158498 109 ntBASIC4.01□□□□□ -1.77
Nubp1Q9R060 Gm25646-201ENSMUST00000178527 79 ntBASIC4.01□□□□□ -1.77
Nubp1Q9R060 1700109G14Rik-203ENSMUST00000190737 801 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Nubp1Q9R060 Gm44459-201ENSMUST00000203926 160 ntBASIC4.01□□□□□ -1.77
Nubp1Q9R060 Gm44294-201ENSMUST00000205090 728 ntBASIC4.01□□□□□ -1.77
Nubp1Q9R060 Gm22738-201ENSMUST00000083440 147 ntBASIC4.01□□□□□ -1.77
Nubp1Q9R060 Gm26165-201ENSMUST00000083791 138 ntBASIC4.01□□□□□ -1.77
Nubp1Q9R060 Gm43668-201ENSMUST00000197014 5342 ntBASIC4.01□□□□□ -1.77
Nubp1Q9R060 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
Nubp1Q9R060 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Nubp1Q9R060 AC140397.1-201ENSMUST00000225563 4562 ntBASIC4□□□□□ -1.77
Nubp1Q9R060 Slc5a12-201ENSMUST00000045972 3529 ntTSL 1 (best) BASIC4□□□□□ -1.77
Nubp1Q9R060 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Nubp1Q9R060 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC4□□□□□ -1.77
Nubp1Q9R060 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC4□□□□□ -1.77
Nubp1Q9R060 Defa-ps5-201ENSMUST00000121541 279 ntBASIC4□□□□□ -1.77
Nubp1Q9R060 Gm13560-201ENSMUST00000121865 329 ntBASIC4□□□□□ -1.77
Nubp1Q9R060 Gm23234-201ENSMUST00000157304 134 ntBASIC4□□□□□ -1.77
Nubp1Q9R060 Gm23504-201ENSMUST00000158988 95 ntBASIC4□□□□□ -1.77
Nubp1Q9R060 Gm22243-201ENSMUST00000178754 120 ntBASIC4□□□□□ -1.77
Nubp1Q9R060 Gm26435-201ENSMUST00000179026 107 ntBASIC4□□□□□ -1.77
Nubp1Q9R060 Mir6402-201ENSMUST00000183406 80 ntBASIC4□□□□□ -1.77
Nubp1Q9R060 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC4□□□□□ -1.77
Nubp1Q9R060 Gm28169-201ENSMUST00000190342 345 ntBASIC4□□□□□ -1.77
Nubp1Q9R060 Gm44389-201ENSMUST00000203795 182 ntBASIC4□□□□□ -1.77
Nubp1Q9R060 Gm44976-201ENSMUST00000205543 261 ntBASIC4□□□□□ -1.77
Nubp1Q9R060 AC149294.9-201ENSMUST00000227256 164 ntBASIC4□□□□□ -1.77
Nubp1Q9R060 Mup14-201ENSMUST00000071005 652 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
Nubp1Q9R060 Gm22245-201ENSMUST00000082479 103 ntBASIC4□□□□□ -1.77
Nubp1Q9R060 Mir369-201ENSMUST00000083627 79 ntBASIC4□□□□□ -1.77
Nubp1Q9R060 Mir323-201ENSMUST00000083683 86 ntBASIC4□□□□□ -1.77
Nubp1Q9R060 Adam26a-201ENSMUST00000049577 2489 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Nubp1Q9R060 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC4□□□□□ -1.77
Nubp1Q9R060 AC157570.1-201ENSMUST00000218052 3778 ntBASIC4□□□□□ -1.77
Nubp1Q9R060 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
Nubp1Q9R060 Olfr772-202ENSMUST00000214672 2955 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Nubp1Q9R060 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Nubp1Q9R060 Gm43486-201ENSMUST00000196431 4339 ntBASIC3.99□□□□□ -1.77
Nubp1Q9R060 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
Nubp1Q9R060 Gm42768-201ENSMUST00000197734 2897 ntBASIC3.99□□□□□ -1.77
Nubp1Q9R060 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Nubp1Q9R060 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Nubp1Q9R060 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Nubp1Q9R060 Gm24403-201ENSMUST00000104616 130 ntBASIC3.99□□□□□ -1.77
Nubp1Q9R060 Scgb1b23-ps-201ENSMUST00000116009 252 ntBASIC3.99□□□□□ -1.77
Nubp1Q9R060 Gm11644-201ENSMUST00000119735 150 ntBASIC3.99□□□□□ -1.77
Nubp1Q9R060 Atp5k-ps2-201ENSMUST00000120437 210 ntBASIC3.99□□□□□ -1.77
Nubp1Q9R060 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC3.99□□□□□ -1.77
Nubp1Q9R060 Gm24061-201ENSMUST00000157489 120 ntBASIC3.99□□□□□ -1.77
Nubp1Q9R060 Gm22946-201ENSMUST00000158558 82 ntBASIC3.99□□□□□ -1.77
Nubp1Q9R060 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC3.99□□□□□ -1.77
Nubp1Q9R060 Gm25817-201ENSMUST00000177758 121 ntBASIC3.99□□□□□ -1.77
Nubp1Q9R060 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Nubp1Q9R060 Gm24766-201ENSMUST00000179182 121 ntBASIC3.99□□□□□ -1.77
Nubp1Q9R060 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Nubp1Q9R060 Gm21064-202ENSMUST00000190583 278 ntBASIC3.99□□□□□ -1.77
Nubp1Q9R060 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC3.99□□□□□ -1.77
Nubp1Q9R060 AC126253.2-201ENSMUST00000226518 205 ntBASIC3.99□□□□□ -1.77
Nubp1Q9R060 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC3.99□□□□□ -1.77
Nubp1Q9R060 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC3.99□□□□□ -1.77
Nubp1Q9R060 A430106G13Rik-201ENSMUST00000182158 3388 ntBASIC3.99□□□□□ -1.77
Nubp1Q9R060 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 127.5 ms