Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Gm5581-201ENSMUST00000072940 2550 ntBASIC0.12□□□□□ -2.39
Scn11aQ9R053 Gm14669-201ENSMUST00000118841 250 ntBASIC0.11□□□□□ -2.39
Scn11aQ9R053 Gm11240-201ENSMUST00000142047 751 ntTSL 1 (best) BASIC0.11□□□□□ -2.39
Scn11aQ9R053 Gm24716-201ENSMUST00000157524 104 ntBASIC0.11□□□□□ -2.39
Scn11aQ9R053 Gm21171-201ENSMUST00000180048 673 ntBASIC0.11□□□□□ -2.39
Scn11aQ9R053 mt-Nd1-201ENSMUST00000082392 957 ntAPPRIS P1 BASIC0.11□□□□□ -2.39
Scn11aQ9R053 Gm22785-201ENSMUST00000104087 132 ntBASIC0.11□□□□□ -2.39
Scn11aQ9R053 Gm13731-201ENSMUST00000117332 196 ntBASIC0.11□□□□□ -2.39
Scn11aQ9R053 Gm14568-201ENSMUST00000119321 294 ntBASIC0.11□□□□□ -2.39
Scn11aQ9R053 Gm24296-201ENSMUST00000158297 106 ntBASIC0.11□□□□□ -2.39
Scn11aQ9R053 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC0.11□□□□□ -2.39
Scn11aQ9R053 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC0.11□□□□□ -2.39
Scn11aQ9R053 Gm44564-201ENSMUST00000207985 180 ntBASIC0.11□□□□□ -2.39
Scn11aQ9R053 Gm22299-201ENSMUST00000082663 136 ntBASIC0.11□□□□□ -2.39
Scn11aQ9R053 Gm25578-201ENSMUST00000083406 104 ntBASIC0.11□□□□□ -2.39
Scn11aQ9R053 Gm27878-201ENSMUST00000184000 106 ntBASIC0.1□□□□□ -2.39
Scn11aQ9R053 Gm45387-201ENSMUST00000209792 632 ntBASIC0.1□□□□□ -2.39
Scn11aQ9R053 Mir33-201ENSMUST00000083531 69 ntBASIC0.1□□□□□ -2.39
Scn11aQ9R053 Vmn2r-ps82-201ENSMUST00000174222 1641 ntBASIC0.1□□□□□ -2.39
Scn11aQ9R053 Gm11904-201ENSMUST00000120562 248 ntBASIC0.09□□□□□ -2.39
Scn11aQ9R053 Gm11358-201ENSMUST00000122310 373 ntBASIC0.09□□□□□ -2.39
Scn11aQ9R053 Gm23277-201ENSMUST00000157914 136 ntBASIC0.09□□□□□ -2.39
Scn11aQ9R053 Gm22164-201ENSMUST00000158413 106 ntBASIC0.09□□□□□ -2.39
Scn11aQ9R053 Gm42958-201ENSMUST00000197595 318 ntBASIC0.09□□□□□ -2.39
Scn11aQ9R053 Gm45912-201ENSMUST00000210646 543 ntBASIC0.09□□□□□ -2.39
Scn11aQ9R053 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC0.09□□□□□ -2.39
Scn11aQ9R053 Gm26206-201ENSMUST00000082908 110 ntBASIC0.09□□□□□ -2.39
Scn11aQ9R053 Gm36989-201ENSMUST00000193225 2160 ntBASIC0.09□□□□□ -2.39
Scn11aQ9R053 Mir667-201ENSMUST00000102441 92 ntBASIC0.09□□□□□ -2.4
Scn11aQ9R053 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC0.09□□□□□ -2.4
Scn11aQ9R053 Gm14362-201ENSMUST00000121679 273 ntBASIC0.09□□□□□ -2.4
Scn11aQ9R053 Gm15254-201ENSMUST00000149567 273 ntBASIC0.09□□□□□ -2.4
Scn11aQ9R053 Snord11-201ENSMUST00000158468 84 ntBASIC0.09□□□□□ -2.4
Scn11aQ9R053 Gm18358-201ENSMUST00000173179 1277 ntBASIC0.09□□□□□ -2.4
Scn11aQ9R053 Gm20477-201ENSMUST00000174028 280 ntBASIC0.09□□□□□ -2.4
Scn11aQ9R053 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC0.09□□□□□ -2.4
Scn11aQ9R053 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC0.09□□□□□ -2.4
Scn11aQ9R053 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC0.09□□□□□ -2.4
Scn11aQ9R053 AC154424.1-201ENSMUST00000225883 799 ntBASIC0.09□□□□□ -2.4
Scn11aQ9R053 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC0.09□□□□□ -2.4
Scn11aQ9R053 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC0.09□□□□□ -2.4
Scn11aQ9R053 Snord96a-201ENSMUST00000082791 81 ntBASIC0.09□□□□□ -2.4
Scn11aQ9R053 Gm23932-201ENSMUST00000082914 107 ntBASIC0.09□□□□□ -2.4
Scn11aQ9R053 Mir411-201ENSMUST00000083543 82 ntBASIC0.09□□□□□ -2.4
Scn11aQ9R053 Gm24587-201ENSMUST00000116697 89 ntBASIC0.08□□□□□ -2.4
Scn11aQ9R053 Gm22731-201ENSMUST00000158086 94 ntBASIC0.08□□□□□ -2.4
Scn11aQ9R053 Gm22075-201ENSMUST00000158599 192 ntBASIC0.08□□□□□ -2.4
Scn11aQ9R053 Gm22527-201ENSMUST00000158816 106 ntBASIC0.08□□□□□ -2.4
Scn11aQ9R053 Gm17677-201ENSMUST00000166746 351 ntAPPRIS P1 TSL 1 (best) BASIC0.08□□□□□ -2.4
Scn11aQ9R053 Gm25026-201ENSMUST00000175017 188 ntBASIC0.08□□□□□ -2.4
Scn11aQ9R053 Gm5583-201ENSMUST00000174328 1519 ntBASIC0.08□□□□□ -2.4
Scn11aQ9R053 Gm26011-201ENSMUST00000104410 104 ntBASIC0.07□□□□□ -2.4
Scn11aQ9R053 Gm11606-201ENSMUST00000120706 617 ntBASIC0.07□□□□□ -2.4
Scn11aQ9R053 Gm25393-201ENSMUST00000157336 285 ntBASIC0.07□□□□□ -2.4
Scn11aQ9R053 AC188459.1-201ENSMUST00000216651 300 ntBASIC0.07□□□□□ -2.4
Scn11aQ9R053 AC154851.2-201ENSMUST00000222172 644 ntBASIC0.07□□□□□ -2.4
Scn11aQ9R053 AC166830.2-201ENSMUST00000225821 196 ntBASIC0.07□□□□□ -2.4
Scn11aQ9R053 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC0.07□□□□□ -2.4
Scn11aQ9R053 Mir467h-201ENSMUST00000116759 121 ntBASIC0.06□□□□□ -2.4
Scn11aQ9R053 Gm26303-201ENSMUST00000116845 119 ntBASIC0.06□□□□□ -2.4
Scn11aQ9R053 Gm23381-201ENSMUST00000157676 94 ntBASIC0.06□□□□□ -2.4
Scn11aQ9R053 Mir15a-201ENSMUST00000175266 84 ntBASIC0.06□□□□□ -2.4
Scn11aQ9R053 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC0.06□□□□□ -2.4
Scn11aQ9R053 AC160031.2-201ENSMUST00000218242 274 ntBASIC0.06□□□□□ -2.4
Scn11aQ9R053 Snord33-201ENSMUST00000083694 84 ntBASIC0.06□□□□□ -2.4
Scn11aQ9R053 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC0.06□□□□□ -2.4
Scn11aQ9R053 Gm25011-201ENSMUST00000158398 126 ntBASIC0.06□□□□□ -2.4
Scn11aQ9R053 Gm21744-201ENSMUST00000178403 662 ntBASIC0.06□□□□□ -2.4
Scn11aQ9R053 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC0.06□□□□□ -2.4
Scn11aQ9R053 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC0.06□□□□□ -2.4
Scn11aQ9R053 AC124542.1-201ENSMUST00000205588 908 ntBASIC0.06□□□□□ -2.4
Scn11aQ9R053 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.06□□□□□ -2.4
Scn11aQ9R053 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC0.06□□□□□ -2.4
Scn11aQ9R053 Gm14013-201ENSMUST00000119006 270 ntBASIC0.05□□□□□ -2.4
Scn11aQ9R053 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC0.05□□□□□ -2.4
Scn11aQ9R053 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC0.05□□□□□ -2.4
Scn11aQ9R053 Gm29044-202ENSMUST00000188980 300 ntTSL 5 BASIC0.05□□□□□ -2.4
Scn11aQ9R053 AC159476.2-201ENSMUST00000216221 418 ntBASIC0.05□□□□□ -2.4
Scn11aQ9R053 Gm26326-201ENSMUST00000083070 129 ntBASIC0.05□□□□□ -2.4
Scn11aQ9R053 Gm14445-201ENSMUST00000117051 1484 ntBASIC0.05□□□□□ -2.4
Scn11aQ9R053 Gm24468-201ENSMUST00000104489 104 ntBASIC0.04□□□□□ -2.4
Scn11aQ9R053 Gm12656-201ENSMUST00000118149 577 ntBASIC0.04□□□□□ -2.4
Scn11aQ9R053 Sval2-203ENSMUST00000120605 497 ntTSL 2 BASIC0.04□□□□□ -2.4
Scn11aQ9R053 Gm11965-201ENSMUST00000122017 277 ntBASIC0.04□□□□□ -2.4
Scn11aQ9R053 Ighv15-1-201ENSMUST00000194450 276 ntBASIC0.04□□□□□ -2.4
Scn11aQ9R053 Mirlet7f-1-201ENSMUST00000198652 89 ntBASIC0.04□□□□□ -2.4
Scn11aQ9R053 AC121960.3-201ENSMUST00000227077 623 ntBASIC0.04□□□□□ -2.4
Scn11aQ9R053 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC0.04□□□□□ -2.4
Scn11aQ9R053 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC0.04□□□□□ -2.4
Scn11aQ9R053 Gm25697-201ENSMUST00000082902 98 ntBASIC0.04□□□□□ -2.4
Scn11aQ9R053 Gm24047-201ENSMUST00000102405 104 ntBASIC0.04□□□□□ -2.4
Scn11aQ9R053 Gm15211-201ENSMUST00000118932 528 ntBASIC0.04□□□□□ -2.4
Scn11aQ9R053 Gm22995-201ENSMUST00000179670 107 ntBASIC0.04□□□□□ -2.4
Scn11aQ9R053 Gm29277-201ENSMUST00000185226 602 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
Scn11aQ9R053 Gm29089-201ENSMUST00000186209 602 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
Scn11aQ9R053 Gm17987-201ENSMUST00000206902 603 ntBASIC0.04□□□□□ -2.4
Scn11aQ9R053 Gm45374-201ENSMUST00000211388 136 ntBASIC0.04□□□□□ -2.4
Scn11aQ9R053 Gm18252-203ENSMUST00000215855 757 ntBASIC0.04□□□□□ -2.4
Scn11aQ9R053 AC158597.1-201ENSMUST00000216234 150 ntBASIC0.04□□□□□ -2.4
Scn11aQ9R053 AC159380.1-201ENSMUST00000218096 121 ntBASIC0.04□□□□□ -2.4
Retrieved 100 of 76,532 protein–RNA pairs in 284.1 ms