Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 1700031L13Rik-204ENSMUST00000188072 812 ntTSL 5 BASIC2.41□□□□□ -2.02
Cpsf3Q9QXK7 Gm37128-201ENSMUST00000192599 232 ntBASIC2.41□□□□□ -2.02
Cpsf3Q9QXK7 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC2.41□□□□□ -2.02
Cpsf3Q9QXK7 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC2.41□□□□□ -2.02
Cpsf3Q9QXK7 AC164117.2-201ENSMUST00000222090 327 ntBASIC2.41□□□□□ -2.02
Cpsf3Q9QXK7 Gm26457-201ENSMUST00000082678 78 ntBASIC2.41□□□□□ -2.02
Cpsf3Q9QXK7 Gm24043-201ENSMUST00000083108 116 ntBASIC2.41□□□□□ -2.02
Cpsf3Q9QXK7 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.41□□□□□ -2.02
Cpsf3Q9QXK7 Gm45558-201ENSMUST00000209384 1895 ntBASIC2.41□□□□□ -2.02
Cpsf3Q9QXK7 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.4□□□□□ -2.02
Cpsf3Q9QXK7 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.4□□□□□ -2.02
Cpsf3Q9QXK7 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Cpsf3Q9QXK7 Gm14269-201ENSMUST00000120455 306 ntBASIC2.4□□□□□ -2.03
Cpsf3Q9QXK7 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.4□□□□□ -2.03
Cpsf3Q9QXK7 Dnal1-203ENSMUST00000136159 403 ntTSL 5 BASIC2.4□□□□□ -2.03
Cpsf3Q9QXK7 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC2.4□□□□□ -2.03
Cpsf3Q9QXK7 Gm24358-201ENSMUST00000158424 288 ntBASIC2.4□□□□□ -2.03
Cpsf3Q9QXK7 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC2.4□□□□□ -2.03
Cpsf3Q9QXK7 Gm24084-201ENSMUST00000175173 137 ntBASIC2.4□□□□□ -2.03
Cpsf3Q9QXK7 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC2.4□□□□□ -2.03
Cpsf3Q9QXK7 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC2.4□□□□□ -2.03
Cpsf3Q9QXK7 Gm21737-201ENSMUST00000178112 664 ntBASIC2.4□□□□□ -2.03
Cpsf3Q9QXK7 Gm21815-201ENSMUST00000178213 664 ntBASIC2.4□□□□□ -2.03
Cpsf3Q9QXK7 Gm20874-201ENSMUST00000178356 663 ntBASIC2.4□□□□□ -2.03
Cpsf3Q9QXK7 Gm20901-201ENSMUST00000180177 664 ntBASIC2.4□□□□□ -2.03
Cpsf3Q9QXK7 Gm21647-201ENSMUST00000189755 664 ntBASIC2.4□□□□□ -2.03
Cpsf3Q9QXK7 Gm43722-201ENSMUST00000196054 124 ntBASIC2.4□□□□□ -2.03
Cpsf3Q9QXK7 Trav5d-2-201ENSMUST00000196107 275 ntBASIC2.4□□□□□ -2.03
Cpsf3Q9QXK7 Trav5n-2-201ENSMUST00000197136 275 ntBASIC2.4□□□□□ -2.03
Cpsf3Q9QXK7 Mir3068-202ENSMUST00000197755 79 ntBASIC2.4□□□□□ -2.03
Cpsf3Q9QXK7 Gm43587-201ENSMUST00000199590 204 ntBASIC2.4□□□□□ -2.03
Cpsf3Q9QXK7 Gm18453-201ENSMUST00000208000 626 ntBASIC2.4□□□□□ -2.03
Cpsf3Q9QXK7 AC166358.7-201ENSMUST00000221132 108 ntBASIC2.4□□□□□ -2.03
Cpsf3Q9QXK7 AC125543.5-201ENSMUST00000222799 108 ntBASIC2.4□□□□□ -2.03
Cpsf3Q9QXK7 CT485612.2-201ENSMUST00000223014 151 ntBASIC2.4□□□□□ -2.03
Cpsf3Q9QXK7 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
Cpsf3Q9QXK7 Gm23242-201ENSMUST00000083055 107 ntBASIC2.4□□□□□ -2.03
Cpsf3Q9QXK7 Gm24661-201ENSMUST00000083205 104 ntBASIC2.4□□□□□ -2.03
Cpsf3Q9QXK7 Gm24698-201ENSMUST00000083883 130 ntBASIC2.4□□□□□ -2.03
Cpsf3Q9QXK7 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Cpsf3Q9QXK7 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC2.4□□□□□ -2.03
Cpsf3Q9QXK7 Gm45393-201ENSMUST00000211634 2631 ntBASIC2.4□□□□□ -2.03
Cpsf3Q9QXK7 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC2.39□□□□□ -2.03
Cpsf3Q9QXK7 Gm13378-201ENSMUST00000117483 336 ntBASIC2.39□□□□□ -2.03
Cpsf3Q9QXK7 Gm12956-201ENSMUST00000122184 414 ntBASIC2.39□□□□□ -2.03
Cpsf3Q9QXK7 Gm14770-201ENSMUST00000122197 312 ntBASIC2.39□□□□□ -2.03
Cpsf3Q9QXK7 Gm26280-201ENSMUST00000157096 101 ntBASIC2.39□□□□□ -2.03
Cpsf3Q9QXK7 Gm22791-201ENSMUST00000157232 145 ntBASIC2.39□□□□□ -2.03
Cpsf3Q9QXK7 Gm23557-201ENSMUST00000157820 138 ntBASIC2.39□□□□□ -2.03
Cpsf3Q9QXK7 Gm21518-201ENSMUST00000178115 567 ntTSL 5 BASIC2.39□□□□□ -2.03
Cpsf3Q9QXK7 Gm20736-201ENSMUST00000178198 567 ntTSL 5 BASIC2.39□□□□□ -2.03
Cpsf3Q9QXK7 Gm20843-201ENSMUST00000178505 567 ntTSL 5 BASIC2.39□□□□□ -2.03
Cpsf3Q9QXK7 Gm21209-201ENSMUST00000178556 567 ntTSL 5 BASIC2.39□□□□□ -2.03
Cpsf3Q9QXK7 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC2.39□□□□□ -2.03
Cpsf3Q9QXK7 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC2.39□□□□□ -2.03
Cpsf3Q9QXK7 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC2.39□□□□□ -2.03
Cpsf3Q9QXK7 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC2.39□□□□□ -2.03
Cpsf3Q9QXK7 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC2.39□□□□□ -2.03
Cpsf3Q9QXK7 Gm44844-201ENSMUST00000207242 336 ntBASIC2.39□□□□□ -2.03
Cpsf3Q9QXK7 Gm34783-201ENSMUST00000209159 303 ntBASIC2.39□□□□□ -2.03
Cpsf3Q9QXK7 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC2.39□□□□□ -2.03
Cpsf3Q9QXK7 AC109214.2-201ENSMUST00000220089 358 ntBASIC2.39□□□□□ -2.03
Cpsf3Q9QXK7 CT009713.9-201ENSMUST00000223604 389 ntBASIC2.39□□□□□ -2.03
Cpsf3Q9QXK7 AC123533.1-201ENSMUST00000227782 446 ntBASIC2.39□□□□□ -2.03
Cpsf3Q9QXK7 Gm25130-201ENSMUST00000082650 156 ntBASIC2.39□□□□□ -2.03
Cpsf3Q9QXK7 Gm25578-201ENSMUST00000083406 104 ntBASIC2.39□□□□□ -2.03
Cpsf3Q9QXK7 Gm23040-201ENSMUST00000083869 163 ntBASIC2.39□□□□□ -2.03
Cpsf3Q9QXK7 Gm37661-201ENSMUST00000191863 1550 ntBASIC2.39□□□□□ -2.03
Cpsf3Q9QXK7 Zfp160-201ENSMUST00000088811 3791 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Cpsf3Q9QXK7 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.38□□□□□ -2.03
Cpsf3Q9QXK7 Ifi203-205ENSMUST00000129829 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC2.38□□□□□ -2.03
Cpsf3Q9QXK7 Gm24172-201ENSMUST00000104127 117 ntBASIC2.38□□□□□ -2.03
Cpsf3Q9QXK7 Gm25509-201ENSMUST00000116985 106 ntBASIC2.38□□□□□ -2.03
Cpsf3Q9QXK7 Gm23642-201ENSMUST00000157858 258 ntBASIC2.38□□□□□ -2.03
Cpsf3Q9QXK7 Gm26159-201ENSMUST00000158968 104 ntBASIC2.38□□□□□ -2.03
Cpsf3Q9QXK7 Gm25707-201ENSMUST00000175120 96 ntBASIC2.38□□□□□ -2.03
Cpsf3Q9QXK7 Gm23660-201ENSMUST00000178362 79 ntBASIC2.38□□□□□ -2.03
Cpsf3Q9QXK7 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
Cpsf3Q9QXK7 Gm24088-201ENSMUST00000179100 79 ntBASIC2.38□□□□□ -2.03
Cpsf3Q9QXK7 Gm26968-201ENSMUST00000182894 481 ntBASIC2.38□□□□□ -2.03
Cpsf3Q9QXK7 Mir7062-201ENSMUST00000185038 66 ntBASIC2.38□□□□□ -2.03
Cpsf3Q9QXK7 Gm29322-201ENSMUST00000185378 582 ntTSL 5 BASIC2.38□□□□□ -2.03
Cpsf3Q9QXK7 Gm18356-201ENSMUST00000185677 623 ntBASIC2.38□□□□□ -2.03
Cpsf3Q9QXK7 Gm28627-201ENSMUST00000186141 453 ntBASIC2.38□□□□□ -2.03
Cpsf3Q9QXK7 Gm43680-201ENSMUST00000199466 340 ntBASIC2.38□□□□□ -2.03
Cpsf3Q9QXK7 Gm44083-201ENSMUST00000203114 337 ntBASIC2.38□□□□□ -2.03
Cpsf3Q9QXK7 Gm45375-201ENSMUST00000210338 280 ntBASIC2.38□□□□□ -2.03
Cpsf3Q9QXK7 AC109212.1-201ENSMUST00000215561 427 ntBASIC2.38□□□□□ -2.03
Cpsf3Q9QXK7 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.38□□□□□ -2.03
Cpsf3Q9QXK7 AC154521.1-201ENSMUST00000222635 330 ntBASIC2.38□□□□□ -2.03
Cpsf3Q9QXK7 Gm24313-201ENSMUST00000082561 133 ntBASIC2.38□□□□□ -2.03
Cpsf3Q9QXK7 Olfr1201-203ENSMUST00000216213 2602 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
Cpsf3Q9QXK7 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC2.37□□□□□ -2.03
Cpsf3Q9QXK7 Olfr1496-202ENSMUST00000209137 2394 ntAPPRIS ALT1 TSL 5 BASIC2.37□□□□□ -2.03
Cpsf3Q9QXK7 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.37□□□□□ -2.03
Cpsf3Q9QXK7 Ppp1r3a-201ENSMUST00000045096 6965 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Cpsf3Q9QXK7 Gm23202-201ENSMUST00000104376 129 ntBASIC2.37□□□□□ -2.03
Cpsf3Q9QXK7 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
Cpsf3Q9QXK7 Gm12550-201ENSMUST00000118478 329 ntBASIC2.37□□□□□ -2.03
Cpsf3Q9QXK7 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 168.7 ms