Protein–RNA interactions for Protein: Q9JKS4

Ldb3, LIM domain-binding protein 3, mousemouse

Known RBP Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3Q9JKS4 Zfp980-202ENSMUST00000180014 1938 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
Ldb3Q9JKS4 Sacs-203ENSMUST00000119943 14991 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
Ldb3Q9JKS4 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
Ldb3Q9JKS4 Gm13314-201ENSMUST00000118742 335 ntBASIC3.05□□□□□ -1.92
Ldb3Q9JKS4 Gm25107-201ENSMUST00000122472 129 ntBASIC3.05□□□□□ -1.92
Ldb3Q9JKS4 Gm16289-201ENSMUST00000162079 183 ntBASIC3.05□□□□□ -1.92
Ldb3Q9JKS4 Gm17166-201ENSMUST00000172006 431 ntBASIC3.05□□□□□ -1.92
Ldb3Q9JKS4 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC3.05□□□□□ -1.92
Ldb3Q9JKS4 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC3.05□□□□□ -1.92
Ldb3Q9JKS4 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC3.05□□□□□ -1.92
Ldb3Q9JKS4 Gm19901-201ENSMUST00000192191 495 ntBASIC3.05□□□□□ -1.92
Ldb3Q9JKS4 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC3.05□□□□□ -1.92
Ldb3Q9JKS4 Gm23925-201ENSMUST00000082471 132 ntBASIC3.05□□□□□ -1.92
Ldb3Q9JKS4 Gm24164-201ENSMUST00000093663 104 ntBASIC3.05□□□□□ -1.92
Ldb3Q9JKS4 Gm38382-201ENSMUST00000193790 2499 ntBASIC3.05□□□□□ -1.92
Ldb3Q9JKS4 Gm42870-201ENSMUST00000199355 3470 ntBASIC3.05□□□□□ -1.92
Ldb3Q9JKS4 Zfp131-202ENSMUST00000178271 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
Ldb3Q9JKS4 Gm2093-201ENSMUST00000180518 3526 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
Ldb3Q9JKS4 Gm14416-201ENSMUST00000118630 2308 ntBASIC3.04□□□□□ -1.92
Ldb3Q9JKS4 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Ldb3Q9JKS4 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
Ldb3Q9JKS4 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
Ldb3Q9JKS4 Gm25272-201ENSMUST00000104293 128 ntBASIC3.04□□□□□ -1.92
Ldb3Q9JKS4 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC3.04□□□□□ -1.92
Ldb3Q9JKS4 Gm24586-201ENSMUST00000116695 89 ntBASIC3.04□□□□□ -1.92
Ldb3Q9JKS4 Gm13076-201ENSMUST00000118041 204 ntBASIC3.04□□□□□ -1.92
Ldb3Q9JKS4 Gm22380-201ENSMUST00000157479 95 ntBASIC3.04□□□□□ -1.92
Ldb3Q9JKS4 Gm24716-201ENSMUST00000157524 104 ntBASIC3.04□□□□□ -1.92
Ldb3Q9JKS4 Gm27851-201ENSMUST00000183529 63 ntBASIC3.04□□□□□ -1.92
Ldb3Q9JKS4 Mir6914-201ENSMUST00000184999 69 ntBASIC3.04□□□□□ -1.92
Ldb3Q9JKS4 AC131759.1-201ENSMUST00000220642 310 ntTSL 3 BASIC3.04□□□□□ -1.92
Ldb3Q9JKS4 AL590503.1-201ENSMUST00000222053 321 ntBASIC3.04□□□□□ -1.92
Ldb3Q9JKS4 Gm24147-201ENSMUST00000082763 144 ntBASIC3.04□□□□□ -1.92
Ldb3Q9JKS4 Mir384-201ENSMUST00000083565 88 ntBASIC3.04□□□□□ -1.92
Ldb3Q9JKS4 Mir26a-1-201ENSMUST00000083579 90 ntBASIC3.04□□□□□ -1.92
Ldb3Q9JKS4 Gm10242-201ENSMUST00000090064 330 ntBASIC3.04□□□□□ -1.92
Ldb3Q9JKS4 Gm26327-201ENSMUST00000093724 111 ntBASIC3.04□□□□□ -1.92
Ldb3Q9JKS4 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC3.04□□□□□ -1.92
Ldb3Q9JKS4 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
Ldb3Q9JKS4 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
Ldb3Q9JKS4 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
Ldb3Q9JKS4 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Ldb3Q9JKS4 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Ldb3Q9JKS4 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
Ldb3Q9JKS4 Gm12550-201ENSMUST00000118478 329 ntBASIC3.03□□□□□ -1.92
Ldb3Q9JKS4 Gm22560-201ENSMUST00000157332 120 ntBASIC3.03□□□□□ -1.92
Ldb3Q9JKS4 Gm24131-201ENSMUST00000158539 107 ntBASIC3.03□□□□□ -1.92
Ldb3Q9JKS4 Gm24666-201ENSMUST00000158937 167 ntBASIC3.03□□□□□ -1.92
Ldb3Q9JKS4 Gm18486-201ENSMUST00000184040 298 ntBASIC3.03□□□□□ -1.92
Ldb3Q9JKS4 Mir6371-201ENSMUST00000184470 111 ntBASIC3.03□□□□□ -1.92
Ldb3Q9JKS4 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC3.03□□□□□ -1.92
Ldb3Q9JKS4 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
Ldb3Q9JKS4 Gm44922-201ENSMUST00000206690 90 ntBASIC3.03□□□□□ -1.92
Ldb3Q9JKS4 AC135292.1-201ENSMUST00000227665 204 ntBASIC3.03□□□□□ -1.92
Ldb3Q9JKS4 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.03□□□□□ -1.92
Ldb3Q9JKS4 Gm23462-201ENSMUST00000083264 104 ntBASIC3.03□□□□□ -1.92
Ldb3Q9JKS4 Gm24762-201ENSMUST00000083689 104 ntBASIC3.03□□□□□ -1.92
Ldb3Q9JKS4 Cfh-206ENSMUST00000192880 3746 ntTSL 5 BASIC3.03□□□□□ -1.92
Ldb3Q9JKS4 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
Ldb3Q9JKS4 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC3.03□□□□□ -1.92
Ldb3Q9JKS4 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
Ldb3Q9JKS4 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
Ldb3Q9JKS4 Hhla1-201ENSMUST00000100584 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
Ldb3Q9JKS4 Ifi203-ps-201ENSMUST00000155076 2556 ntBASIC3.02□□□□□ -1.93
Ldb3Q9JKS4 Igkv2-109-201ENSMUST00000103322 374 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Ldb3Q9JKS4 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Ldb3Q9JKS4 Gm12458-201ENSMUST00000119387 495 ntBASIC3.02□□□□□ -1.93
Ldb3Q9JKS4 Gm25572-201ENSMUST00000157527 172 ntBASIC3.02□□□□□ -1.93
Ldb3Q9JKS4 Gm23152-201ENSMUST00000175322 116 ntBASIC3.02□□□□□ -1.93
Ldb3Q9JKS4 Gm22367-201ENSMUST00000178930 132 ntBASIC3.02□□□□□ -1.93
Ldb3Q9JKS4 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Ldb3Q9JKS4 Trav6d-3-202ENSMUST00000184883 308 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Ldb3Q9JKS4 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.02□□□□□ -1.93
Ldb3Q9JKS4 Gm43814-201ENSMUST00000197851 413 ntBASIC3.02□□□□□ -1.93
Ldb3Q9JKS4 Mir1a-2-201ENSMUST00000198520 72 ntBASIC3.02□□□□□ -1.93
Ldb3Q9JKS4 Gm42774-201ENSMUST00000198854 283 ntBASIC3.02□□□□□ -1.93
Ldb3Q9JKS4 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Ldb3Q9JKS4 AC098718.2-201ENSMUST00000226822 285 ntBASIC3.02□□□□□ -1.93
Ldb3Q9JKS4 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
Ldb3Q9JKS4 AC154481.2-201ENSMUST00000222526 3175 ntBASIC3.02□□□□□ -1.93
Ldb3Q9JKS4 AC132237.1-201ENSMUST00000220950 4475 ntBASIC3.02□□□□□ -1.93
Ldb3Q9JKS4 Hsf3-202ENSMUST00000119035 2691 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
Ldb3Q9JKS4 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
Ldb3Q9JKS4 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
Ldb3Q9JKS4 Btla-202ENSMUST00000102802 3251 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
Ldb3Q9JKS4 1700006A11Rik-201ENSMUST00000029598 2161 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
Ldb3Q9JKS4 Gm15183-201ENSMUST00000118933 348 ntBASIC3.01□□□□□ -1.93
Ldb3Q9JKS4 Gm14748-201ENSMUST00000119819 411 ntBASIC3.01□□□□□ -1.93
Ldb3Q9JKS4 Gm14687-201ENSMUST00000120206 363 ntBASIC3.01□□□□□ -1.93
Ldb3Q9JKS4 Gm25977-201ENSMUST00000158697 85 ntBASIC3.01□□□□□ -1.93
Ldb3Q9JKS4 Mir6370-201ENSMUST00000183510 120 ntBASIC3.01□□□□□ -1.93
Ldb3Q9JKS4 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC3.01□□□□□ -1.93
Ldb3Q9JKS4 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC3.01□□□□□ -1.93
Ldb3Q9JKS4 Gm19620-201ENSMUST00000195972 434 ntBASIC3.01□□□□□ -1.93
Ldb3Q9JKS4 Gm43021-201ENSMUST00000198692 337 ntTSL 3 BASIC3.01□□□□□ -1.93
Ldb3Q9JKS4 Gm45543-201ENSMUST00000209327 88 ntBASIC3.01□□□□□ -1.93
Ldb3Q9JKS4 Gm18000-201ENSMUST00000212153 800 ntBASIC3.01□□□□□ -1.93
Ldb3Q9JKS4 AC167250.1-201ENSMUST00000213739 3813 ntBASIC3.01□□□□□ -1.93
Ldb3Q9JKS4 Gm18015-201ENSMUST00000214879 316 ntBASIC3.01□□□□□ -1.93
Ldb3Q9JKS4 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 76,532 protein–RNA pairs in 92.9 ms