Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 Gm22972-201ENSMUST00000083297 131 ntBASIC1.51□□□□□ -2.17
Trem1Q9JKE2 Mir465c-1-201ENSMUST00000093560 81 ntBASIC1.51□□□□□ -2.17
Trem1Q9JKE2 AC124456.1-201ENSMUST00000217391 2597 ntBASIC1.51□□□□□ -2.17
Trem1Q9JKE2 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Trem1Q9JKE2 Gm24282-201ENSMUST00000104232 66 ntBASIC1.5□□□□□ -2.17
Trem1Q9JKE2 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
Trem1Q9JKE2 Gm13672-201ENSMUST00000117554 459 ntBASIC1.5□□□□□ -2.17
Trem1Q9JKE2 Gm6025-201ENSMUST00000121517 201 ntBASIC1.5□□□□□ -2.17
Trem1Q9JKE2 Gm22793-201ENSMUST00000157227 330 ntBASIC1.5□□□□□ -2.17
Trem1Q9JKE2 Gm22817-201ENSMUST00000157448 356 ntBASIC1.5□□□□□ -2.17
Trem1Q9JKE2 Gm23352-201ENSMUST00000158428 64 ntBASIC1.5□□□□□ -2.17
Trem1Q9JKE2 Gm24572-201ENSMUST00000175505 88 ntBASIC1.5□□□□□ -2.17
Trem1Q9JKE2 Gm20613-201ENSMUST00000175828 345 ntBASIC1.5□□□□□ -2.17
Trem1Q9JKE2 Gm27660-201ENSMUST00000184028 208 ntBASIC1.5□□□□□ -2.17
Trem1Q9JKE2 Gm37923-201ENSMUST00000191624 161 ntBASIC1.5□□□□□ -2.17
Trem1Q9JKE2 Gtpbp4-ps7-201ENSMUST00000197059 297 ntBASIC1.5□□□□□ -2.17
Trem1Q9JKE2 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC1.5□□□□□ -2.17
Trem1Q9JKE2 Gm45907-201ENSMUST00000213023 193 ntBASIC1.5□□□□□ -2.17
Trem1Q9JKE2 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC1.5□□□□□ -2.17
Trem1Q9JKE2 Gm25130-201ENSMUST00000082650 156 ntBASIC1.5□□□□□ -2.17
Trem1Q9JKE2 Gm22572-201ENSMUST00000082985 105 ntBASIC1.5□□□□□ -2.17
Trem1Q9JKE2 Gm23453-201ENSMUST00000083326 106 ntBASIC1.5□□□□□ -2.17
Trem1Q9JKE2 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
Trem1Q9JKE2 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Trem1Q9JKE2 n-R5s200-201ENSMUST00000104194 113 ntBASIC1.49□□□□□ -2.17
Trem1Q9JKE2 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC1.49□□□□□ -2.17
Trem1Q9JKE2 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
Trem1Q9JKE2 Gm24241-201ENSMUST00000157787 145 ntBASIC1.49□□□□□ -2.17
Trem1Q9JKE2 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Trem1Q9JKE2 Gm27760-201ENSMUST00000185048 114 ntBASIC1.49□□□□□ -2.17
Trem1Q9JKE2 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC1.49□□□□□ -2.17
Trem1Q9JKE2 Gm29134-201ENSMUST00000186579 126 ntBASIC1.49□□□□□ -2.17
Trem1Q9JKE2 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
Trem1Q9JKE2 Gm28337-201ENSMUST00000190425 666 ntBASIC1.49□□□□□ -2.17
Trem1Q9JKE2 Gm31123-201ENSMUST00000192094 666 ntBASIC1.49□□□□□ -2.17
Trem1Q9JKE2 Ighv2-8-201ENSMUST00000193935 262 ntBASIC1.49□□□□□ -2.17
Trem1Q9JKE2 Gm43582-201ENSMUST00000196149 343 ntBASIC1.49□□□□□ -2.17
Trem1Q9JKE2 Mir691-201ENSMUST00000199719 78 ntBASIC1.49□□□□□ -2.17
Trem1Q9JKE2 Gm44135-201ENSMUST00000205221 368 ntBASIC1.49□□□□□ -2.17
Trem1Q9JKE2 Scgb2b2-202ENSMUST00000205821 357 ntTSL 5 BASIC1.49□□□□□ -2.17
Trem1Q9JKE2 AC153141.1-201ENSMUST00000218636 501 ntBASIC1.49□□□□□ -2.17
Trem1Q9JKE2 Gm40810-201ENSMUST00000219149 253 ntBASIC1.49□□□□□ -2.17
Trem1Q9JKE2 AC239878.2-201ENSMUST00000224048 464 ntBASIC1.49□□□□□ -2.17
Trem1Q9JKE2 Gm24982-201ENSMUST00000104456 132 ntBASIC1.48□□□□□ -2.17
Trem1Q9JKE2 Mir344e-201ENSMUST00000104677 66 ntBASIC1.48□□□□□ -2.17
Trem1Q9JKE2 Gm22713-201ENSMUST00000116895 130 ntBASIC1.48□□□□□ -2.17
Trem1Q9JKE2 Gm12871-201ENSMUST00000118758 438 ntBASIC1.48□□□□□ -2.17
Trem1Q9JKE2 Gm26150-201ENSMUST00000157426 151 ntBASIC1.48□□□□□ -2.17
Trem1Q9JKE2 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.48□□□□□ -2.17
Trem1Q9JKE2 Gm42570-201ENSMUST00000195937 292 ntBASIC1.48□□□□□ -2.17
Trem1Q9JKE2 Gm17906-201ENSMUST00000202480 901 ntBASIC1.48□□□□□ -2.17
Trem1Q9JKE2 CT009696.2-201ENSMUST00000216668 432 ntBASIC1.48□□□□□ -2.17
Trem1Q9JKE2 Gm24268-201ENSMUST00000082990 110 ntBASIC1.48□□□□□ -2.17
Trem1Q9JKE2 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.48□□□□□ -2.17
Trem1Q9JKE2 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC1.48□□□□□ -2.17
Trem1Q9JKE2 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
Trem1Q9JKE2 Gm10477-201ENSMUST00000101552 165 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Trem1Q9JKE2 Gm25759-201ENSMUST00000103988 129 ntBASIC1.47□□□□□ -2.17
Trem1Q9JKE2 Gm24338-201ENSMUST00000104205 127 ntBASIC1.47□□□□□ -2.17
Trem1Q9JKE2 Gm22488-201ENSMUST00000116811 127 ntBASIC1.47□□□□□ -2.17
Trem1Q9JKE2 Gm12806-201ENSMUST00000119384 268 ntBASIC1.47□□□□□ -2.17
Trem1Q9JKE2 Gm24895-201ENSMUST00000122742 74 ntBASIC1.47□□□□□ -2.17
Trem1Q9JKE2 Gm10715-201ENSMUST00000155807 675 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
Trem1Q9JKE2 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC1.47□□□□□ -2.17
Trem1Q9JKE2 Gm21094-201ENSMUST00000177842 498 ntTSL 5 BASIC1.47□□□□□ -2.17
Trem1Q9JKE2 Gm20837-201ENSMUST00000178446 498 ntTSL 5 BASIC1.47□□□□□ -2.17
Trem1Q9JKE2 Gm21739-201ENSMUST00000178639 498 ntTSL 5 BASIC1.47□□□□□ -2.17
Trem1Q9JKE2 Gm28891-201ENSMUST00000178751 498 ntTSL 5 BASIC1.47□□□□□ -2.17
Trem1Q9JKE2 Gm28490-201ENSMUST00000179076 498 ntTSL 5 BASIC1.47□□□□□ -2.17
Trem1Q9JKE2 Gm21861-201ENSMUST00000179480 498 ntTSL 5 BASIC1.47□□□□□ -2.17
Trem1Q9JKE2 Gm21256-201ENSMUST00000179672 498 ntTSL 5 BASIC1.47□□□□□ -2.17
Trem1Q9JKE2 Gm20838-201ENSMUST00000179884 498 ntTSL 5 BASIC1.47□□□□□ -2.17
Trem1Q9JKE2 Gm21679-201ENSMUST00000180373 498 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Trem1Q9JKE2 Gm5269-201ENSMUST00000183590 138 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Trem1Q9JKE2 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC1.47□□□□□ -2.17
Trem1Q9JKE2 Gm44654-201ENSMUST00000208052 329 ntBASIC1.47□□□□□ -2.17
Trem1Q9JKE2 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC1.47□□□□□ -2.17
Trem1Q9JKE2 Gm16976-205ENSMUST00000227324 226 ntBASIC1.47□□□□□ -2.17
Trem1Q9JKE2 Gm22683-201ENSMUST00000082854 137 ntBASIC1.47□□□□□ -2.17
Trem1Q9JKE2 Gm2869-201ENSMUST00000124359 2621 ntBASIC1.47□□□□□ -2.17
Trem1Q9JKE2 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Trem1Q9JKE2 Vmn1r83-202ENSMUST00000226701 2788 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Trem1Q9JKE2 Gm25094-201ENSMUST00000103992 131 ntBASIC1.46□□□□□ -2.18
Trem1Q9JKE2 Gm25109-201ENSMUST00000122474 114 ntBASIC1.46□□□□□ -2.18
Trem1Q9JKE2 Gm22221-201ENSMUST00000157362 103 ntBASIC1.46□□□□□ -2.18
Trem1Q9JKE2 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC1.46□□□□□ -2.18
Trem1Q9JKE2 Gm29397-201ENSMUST00000185205 333 ntBASIC1.46□□□□□ -2.18
Trem1Q9JKE2 Gm29603-201ENSMUST00000186792 334 ntBASIC1.46□□□□□ -2.18
Trem1Q9JKE2 Gm28437-201ENSMUST00000190277 783 ntBASIC1.46□□□□□ -2.18
Trem1Q9JKE2 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.46□□□□□ -2.18
Trem1Q9JKE2 Gm45366-201ENSMUST00000209828 384 ntBASIC1.46□□□□□ -2.18
Trem1Q9JKE2 Gm18854-201ENSMUST00000211196 329 ntBASIC1.46□□□□□ -2.18
Trem1Q9JKE2 mt-Co3-201ENSMUST00000082409 784 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Trem1Q9JKE2 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Trem1Q9JKE2 Olfr792-202ENSMUST00000215436 2113 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Trem1Q9JKE2 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC1.45□□□□□ -2.18
Trem1Q9JKE2 Gm16242-201ENSMUST00000117741 334 ntBASIC1.45□□□□□ -2.18
Trem1Q9JKE2 Gm11606-201ENSMUST00000120706 617 ntBASIC1.45□□□□□ -2.18
Trem1Q9JKE2 Gm23170-201ENSMUST00000157158 106 ntBASIC1.45□□□□□ -2.18
Trem1Q9JKE2 Gm22654-201ENSMUST00000157874 105 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 91.8 ms