Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC1.31□□□□□ -2.2
Lima1Q9ERG0 Gm23983-201ENSMUST00000157142 114 ntBASIC1.31□□□□□ -2.2
Lima1Q9ERG0 Gm26102-201ENSMUST00000157251 284 ntBASIC1.31□□□□□ -2.2
Lima1Q9ERG0 Gm23829-201ENSMUST00000157392 270 ntBASIC1.31□□□□□ -2.2
Lima1Q9ERG0 Gm22668-201ENSMUST00000158716 260 ntBASIC1.31□□□□□ -2.2
Lima1Q9ERG0 Gm23145-201ENSMUST00000178912 79 ntBASIC1.31□□□□□ -2.2
Lima1Q9ERG0 Gm25457-201ENSMUST00000179509 107 ntBASIC1.31□□□□□ -2.2
Lima1Q9ERG0 Gm28151-201ENSMUST00000189404 951 ntBASIC1.31□□□□□ -2.2
Lima1Q9ERG0 Gm37361-201ENSMUST00000194345 132 ntBASIC1.31□□□□□ -2.2
Lima1Q9ERG0 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC1.31□□□□□ -2.2
Lima1Q9ERG0 Gm44666-201ENSMUST00000208544 391 ntBASIC1.31□□□□□ -2.2
Lima1Q9ERG0 AC069561.2-201ENSMUST00000217596 420 ntBASIC1.31□□□□□ -2.2
Lima1Q9ERG0 AC158606.1-201ENSMUST00000220078 325 ntBASIC1.31□□□□□ -2.2
Lima1Q9ERG0 AC159203.2-201ENSMUST00000221326 193 ntBASIC1.31□□□□□ -2.2
Lima1Q9ERG0 Gm24045-201ENSMUST00000083113 98 ntBASIC1.31□□□□□ -2.2
Lima1Q9ERG0 Mir429-201ENSMUST00000083493 83 ntBASIC1.31□□□□□ -2.2
Lima1Q9ERG0 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
Lima1Q9ERG0 Gm2869-201ENSMUST00000124359 2621 ntBASIC1.31□□□□□ -2.2
Lima1Q9ERG0 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC1.31□□□□□ -2.2
Lima1Q9ERG0 Gm25495-201ENSMUST00000104431 131 ntBASIC1.3□□□□□ -2.2
Lima1Q9ERG0 Gm13059-201ENSMUST00000119881 398 ntBASIC1.3□□□□□ -2.2
Lima1Q9ERG0 Gm12309-201ENSMUST00000119889 182 ntBASIC1.3□□□□□ -2.2
Lima1Q9ERG0 Gm11363-201ENSMUST00000121672 548 ntBASIC1.3□□□□□ -2.2
Lima1Q9ERG0 Gm6182-201ENSMUST00000156439 1208 ntBASIC1.3□□□□□ -2.2
Lima1Q9ERG0 Gm23670-201ENSMUST00000157469 119 ntBASIC1.3□□□□□ -2.2
Lima1Q9ERG0 Gm9593-201ENSMUST00000166034 469 ntBASIC1.3□□□□□ -2.2
Lima1Q9ERG0 Gm25933-201ENSMUST00000178943 108 ntBASIC1.3□□□□□ -2.2
Lima1Q9ERG0 Gm24638-201ENSMUST00000179807 132 ntBASIC1.3□□□□□ -2.2
Lima1Q9ERG0 Gm23862-201ENSMUST00000180342 94 ntBASIC1.3□□□□□ -2.2
Lima1Q9ERG0 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC1.3□□□□□ -2.2
Lima1Q9ERG0 Mir3961-201ENSMUST00000198795 59 ntBASIC1.3□□□□□ -2.2
Lima1Q9ERG0 Gm43583-201ENSMUST00000199235 303 ntBASIC1.3□□□□□ -2.2
Lima1Q9ERG0 AC159297.2-201ENSMUST00000219567 1075 ntBASIC1.3□□□□□ -2.2
Lima1Q9ERG0 Gm22229-201ENSMUST00000082987 108 ntBASIC1.3□□□□□ -2.2
Lima1Q9ERG0 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC1.3□□□□□ -2.2
Lima1Q9ERG0 n-R5s158-201ENSMUST00000104095 118 ntBASIC1.29□□□□□ -2.2
Lima1Q9ERG0 n-R5s202-201ENSMUST00000104517 114 ntBASIC1.29□□□□□ -2.2
Lima1Q9ERG0 Gm22817-201ENSMUST00000157448 356 ntBASIC1.29□□□□□ -2.2
Lima1Q9ERG0 Gm25831-201ENSMUST00000158924 163 ntBASIC1.29□□□□□ -2.2
Lima1Q9ERG0 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC1.29□□□□□ -2.2
Lima1Q9ERG0 Gm20477-201ENSMUST00000174028 280 ntBASIC1.29□□□□□ -2.2
Lima1Q9ERG0 Mir7050-201ENSMUST00000184636 60 ntBASIC1.29□□□□□ -2.2
Lima1Q9ERG0 Gm43676-201ENSMUST00000197532 540 ntBASIC1.29□□□□□ -2.2
Lima1Q9ERG0 Gm43680-201ENSMUST00000199466 340 ntBASIC1.29□□□□□ -2.2
Lima1Q9ERG0 AC153646.1-201ENSMUST00000223229 1279 ntBASIC1.29□□□□□ -2.2
Lima1Q9ERG0 n-R5s37-201ENSMUST00000082533 118 ntBASIC1.29□□□□□ -2.2
Lima1Q9ERG0 Mir301b-201ENSMUST00000102333 97 ntBASIC1.28□□□□□ -2.2
Lima1Q9ERG0 Gm13409-201ENSMUST00000122072 546 ntBASIC1.28□□□□□ -2.2
Lima1Q9ERG0 Gm14775-201ENSMUST00000122089 310 ntBASIC1.28□□□□□ -2.2
Lima1Q9ERG0 Gm15077-201ENSMUST00000122344 362 ntBASIC1.28□□□□□ -2.2
Lima1Q9ERG0 Gm25115-201ENSMUST00000157187 140 ntBASIC1.28□□□□□ -2.2
Lima1Q9ERG0 Gm22818-201ENSMUST00000157446 104 ntBASIC1.28□□□□□ -2.2
Lima1Q9ERG0 Gm23122-201ENSMUST00000157645 103 ntBASIC1.28□□□□□ -2.2
Lima1Q9ERG0 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC1.28□□□□□ -2.2
Lima1Q9ERG0 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
Lima1Q9ERG0 Ranbp2-ps3-201ENSMUST00000183549 388 ntBASIC1.28□□□□□ -2.2
Lima1Q9ERG0 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
Lima1Q9ERG0 Gm38333-201ENSMUST00000193608 604 ntBASIC1.28□□□□□ -2.2
Lima1Q9ERG0 4930459L07Rik-201ENSMUST00000199751 420 ntTSL 1 (best) BASIC1.28□□□□□ -2.2
Lima1Q9ERG0 Gm45207-201ENSMUST00000207469 145 ntBASIC1.28□□□□□ -2.2
Lima1Q9ERG0 Tnfrsf23-203ENSMUST00000208017 544 ntTSL 3 BASIC1.28□□□□□ -2.2
Lima1Q9ERG0 AC156560.1-201ENSMUST00000221425 256 ntBASIC1.28□□□□□ -2.2
Lima1Q9ERG0 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
Lima1Q9ERG0 Mir29b-2-201ENSMUST00000083478 81 ntBASIC1.28□□□□□ -2.2
Lima1Q9ERG0 Gm23422-201ENSMUST00000102000 107 ntBASIC1.27□□□□□ -2.21
Lima1Q9ERG0 Gm25068-201ENSMUST00000103895 110 ntBASIC1.27□□□□□ -2.21
Lima1Q9ERG0 Gm25832-201ENSMUST00000104140 130 ntBASIC1.27□□□□□ -2.21
Lima1Q9ERG0 Gm22591-201ENSMUST00000104243 106 ntBASIC1.27□□□□□ -2.21
Lima1Q9ERG0 Gm14793-201ENSMUST00000118739 311 ntBASIC1.27□□□□□ -2.21
Lima1Q9ERG0 Gm4732-201ENSMUST00000118778 473 ntBASIC1.27□□□□□ -2.21
Lima1Q9ERG0 Gm11857-201ENSMUST00000119817 324 ntBASIC1.27□□□□□ -2.21
Lima1Q9ERG0 Gm7916-201ENSMUST00000120325 456 ntBASIC1.27□□□□□ -2.21
Lima1Q9ERG0 Gm24885-201ENSMUST00000158783 270 ntBASIC1.27□□□□□ -2.21
Lima1Q9ERG0 Gm22800-201ENSMUST00000175627 94 ntBASIC1.27□□□□□ -2.21
Lima1Q9ERG0 Gm24388-201ENSMUST00000177872 107 ntBASIC1.27□□□□□ -2.21
Lima1Q9ERG0 Scgb2b17-202ENSMUST00000182640 420 ntAPPRIS ALT2 TSL 3 BASIC1.27□□□□□ -2.21
Lima1Q9ERG0 Ighv12-1-201ENSMUST00000195542 329 ntBASIC1.27□□□□□ -2.21
Lima1Q9ERG0 Gm2628-201ENSMUST00000218019 426 ntBASIC1.27□□□□□ -2.21
Lima1Q9ERG0 AC121844.1-201ENSMUST00000218706 137 ntBASIC1.27□□□□□ -2.21
Lima1Q9ERG0 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.27□□□□□ -2.21
Lima1Q9ERG0 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC1.27□□□□□ -2.21
Lima1Q9ERG0 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.26□□□□□ -2.21
Lima1Q9ERG0 Gm8858-201ENSMUST00000118259 342 ntBASIC1.26□□□□□ -2.21
Lima1Q9ERG0 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.26□□□□□ -2.21
Lima1Q9ERG0 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.26□□□□□ -2.21
Lima1Q9ERG0 Gm22556-201ENSMUST00000157803 100 ntBASIC1.26□□□□□ -2.21
Lima1Q9ERG0 Gm24902-201ENSMUST00000158126 123 ntBASIC1.26□□□□□ -2.21
Lima1Q9ERG0 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.26□□□□□ -2.21
Lima1Q9ERG0 Gm20689-201ENSMUST00000176033 279 ntBASIC1.26□□□□□ -2.21
Lima1Q9ERG0 Snord116l12-201ENSMUST00000179816 94 ntBASIC1.26□□□□□ -2.21
Lima1Q9ERG0 Gm23144-201ENSMUST00000180226 107 ntBASIC1.26□□□□□ -2.21
Lima1Q9ERG0 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC1.26□□□□□ -2.21
Lima1Q9ERG0 Gm18357-201ENSMUST00000188184 580 ntBASIC1.26□□□□□ -2.21
Lima1Q9ERG0 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC1.26□□□□□ -2.21
Lima1Q9ERG0 Gm44482-201ENSMUST00000199232 103 ntBASIC1.26□□□□□ -2.21
Lima1Q9ERG0 Gm44011-201ENSMUST00000203336 394 ntBASIC1.26□□□□□ -2.21
Lima1Q9ERG0 Gm44135-201ENSMUST00000205221 368 ntBASIC1.26□□□□□ -2.21
Lima1Q9ERG0 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.26□□□□□ -2.21
Lima1Q9ERG0 AC102352.1-201ENSMUST00000224187 582 ntBASIC1.26□□□□□ -2.21
Lima1Q9ERG0 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
Retrieved 100 of 76,532 protein–RNA pairs in 104.3 ms