Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC2.1□□□□□ -2.07
Scn4aQ9ER60 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Scn4aQ9ER60 Gm15896-201ENSMUST00000118045 440 ntBASIC2.1□□□□□ -2.07
Scn4aQ9ER60 Gm12872-201ENSMUST00000121835 320 ntBASIC2.1□□□□□ -2.07
Scn4aQ9ER60 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC2.1□□□□□ -2.07
Scn4aQ9ER60 Gm23713-201ENSMUST00000157353 70 ntBASIC2.1□□□□□ -2.07
Scn4aQ9ER60 Gm23332-201ENSMUST00000157424 275 ntBASIC2.1□□□□□ -2.07
Scn4aQ9ER60 Gm22615-201ENSMUST00000158102 70 ntBASIC2.1□□□□□ -2.07
Scn4aQ9ER60 Gm28437-201ENSMUST00000190277 783 ntBASIC2.1□□□□□ -2.07
Scn4aQ9ER60 Gm37119-201ENSMUST00000195691 389 ntBASIC2.1□□□□□ -2.07
Scn4aQ9ER60 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC2.1□□□□□ -2.07
Scn4aQ9ER60 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC2.1□□□□□ -2.07
Scn4aQ9ER60 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
Scn4aQ9ER60 Gm23249-201ENSMUST00000083369 161 ntBASIC2.1□□□□□ -2.07
Scn4aQ9ER60 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
Scn4aQ9ER60 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.09□□□□□ -2.07
Scn4aQ9ER60 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
Scn4aQ9ER60 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
Scn4aQ9ER60 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC2.09□□□□□ -2.08
Scn4aQ9ER60 Gm11991-201ENSMUST00000119652 1074 ntBASIC2.09□□□□□ -2.08
Scn4aQ9ER60 Gm22382-201ENSMUST00000158185 130 ntBASIC2.09□□□□□ -2.08
Scn4aQ9ER60 Gm8114-201ENSMUST00000172225 484 ntBASIC2.09□□□□□ -2.08
Scn4aQ9ER60 Gm45366-201ENSMUST00000209828 384 ntBASIC2.09□□□□□ -2.08
Scn4aQ9ER60 Gm45268-201ENSMUST00000210046 370 ntBASIC2.09□□□□□ -2.08
Scn4aQ9ER60 AC167229.1-201ENSMUST00000220057 469 ntBASIC2.09□□□□□ -2.08
Scn4aQ9ER60 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC2.09□□□□□ -2.08
Scn4aQ9ER60 AC144628.2-201ENSMUST00000227374 352 ntBASIC2.09□□□□□ -2.08
Scn4aQ9ER60 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
Scn4aQ9ER60 Gm23246-201ENSMUST00000083371 67 ntBASIC2.09□□□□□ -2.08
Scn4aQ9ER60 Gm22353-201ENSMUST00000083918 136 ntBASIC2.09□□□□□ -2.08
Scn4aQ9ER60 Gm14797-201ENSMUST00000119378 1480 ntBASIC2.08□□□□□ -2.08
Scn4aQ9ER60 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
Scn4aQ9ER60 Gm15215-201ENSMUST00000117773 489 ntBASIC2.08□□□□□ -2.08
Scn4aQ9ER60 Gm14833-201ENSMUST00000118345 1027 ntBASIC2.08□□□□□ -2.08
Scn4aQ9ER60 Gm12806-201ENSMUST00000119384 268 ntBASIC2.08□□□□□ -2.08
Scn4aQ9ER60 Gm14638-201ENSMUST00000121338 216 ntBASIC2.08□□□□□ -2.08
Scn4aQ9ER60 Gm16411-201ENSMUST00000122164 1100 ntBASIC2.08□□□□□ -2.08
Scn4aQ9ER60 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC2.08□□□□□ -2.08
Scn4aQ9ER60 Gm23813-201ENSMUST00000175153 77 ntBASIC2.08□□□□□ -2.08
Scn4aQ9ER60 Gm24572-201ENSMUST00000175505 88 ntBASIC2.08□□□□□ -2.08
Scn4aQ9ER60 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC2.08□□□□□ -2.08
Scn4aQ9ER60 Gm43529-201ENSMUST00000199178 412 ntBASIC2.08□□□□□ -2.08
Scn4aQ9ER60 Gm8013-201ENSMUST00000200139 462 ntTSL 2 BASIC2.08□□□□□ -2.08
Scn4aQ9ER60 Gm44142-201ENSMUST00000203358 311 ntBASIC2.08□□□□□ -2.08
Scn4aQ9ER60 Gm44818-201ENSMUST00000206608 358 ntBASIC2.08□□□□□ -2.08
Scn4aQ9ER60 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC2.08□□□□□ -2.08
Scn4aQ9ER60 1700030L22Rik-201ENSMUST00000221214 567 ntTSL 5 BASIC2.08□□□□□ -2.08
Scn4aQ9ER60 2410141K09Rik-201ENSMUST00000091541 288 ntTSL 5 BASIC2.08□□□□□ -2.08
Scn4aQ9ER60 Vmn1r178-205ENSMUST00000227993 2518 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
Scn4aQ9ER60 Gm15314-201ENSMUST00000120740 1887 ntBASIC2.08□□□□□ -2.08
Scn4aQ9ER60 Gm26421-201ENSMUST00000104279 132 ntBASIC2.07□□□□□ -2.08
Scn4aQ9ER60 Gm12433-201ENSMUST00000119659 255 ntBASIC2.07□□□□□ -2.08
Scn4aQ9ER60 Gm15029-201ENSMUST00000119742 199 ntBASIC2.07□□□□□ -2.08
Scn4aQ9ER60 Gm11410-201ENSMUST00000120053 1143 ntBASIC2.07□□□□□ -2.08
Scn4aQ9ER60 Gm24839-201ENSMUST00000122602 107 ntBASIC2.07□□□□□ -2.08
Scn4aQ9ER60 Gm26401-201ENSMUST00000158502 76 ntBASIC2.07□□□□□ -2.08
Scn4aQ9ER60 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
Scn4aQ9ER60 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC2.07□□□□□ -2.08
Scn4aQ9ER60 Gm6660-201ENSMUST00000179149 468 ntBASIC2.07□□□□□ -2.08
Scn4aQ9ER60 Mir7j-201ENSMUST00000184427 122 ntBASIC2.07□□□□□ -2.08
Scn4aQ9ER60 Sprr2c-ps-201ENSMUST00000195581 301 ntBASIC2.07□□□□□ -2.08
Scn4aQ9ER60 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
Scn4aQ9ER60 Gm17906-201ENSMUST00000202480 901 ntBASIC2.07□□□□□ -2.08
Scn4aQ9ER60 AC124542.1-201ENSMUST00000205588 908 ntBASIC2.07□□□□□ -2.08
Scn4aQ9ER60 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC2.07□□□□□ -2.08
Scn4aQ9ER60 AC188459.1-201ENSMUST00000216651 300 ntBASIC2.07□□□□□ -2.08
Scn4aQ9ER60 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC2.07□□□□□ -2.08
Scn4aQ9ER60 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
Scn4aQ9ER60 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.07□□□□□ -2.08
Scn4aQ9ER60 Gm14899-201ENSMUST00000118673 548 ntBASIC2.07□□□□□ -2.08
Scn4aQ9ER60 Gm14417-201ENSMUST00000120036 1074 ntBASIC2.07□□□□□ -2.08
Scn4aQ9ER60 Gm23429-201ENSMUST00000122486 149 ntBASIC2.07□□□□□ -2.08
Scn4aQ9ER60 Gm20543-201ENSMUST00000174200 726 ntBASIC2.07□□□□□ -2.08
Scn4aQ9ER60 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC2.07□□□□□ -2.08
Scn4aQ9ER60 AC153541.1-201ENSMUST00000213786 294 ntBASIC2.07□□□□□ -2.08
Scn4aQ9ER60 AC153141.1-201ENSMUST00000218636 501 ntBASIC2.07□□□□□ -2.08
Scn4aQ9ER60 AC123062.1-201ENSMUST00000221287 481 ntBASIC2.07□□□□□ -2.08
Scn4aQ9ER60 Gm22508-201ENSMUST00000082772 110 ntBASIC2.07□□□□□ -2.08
Scn4aQ9ER60 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC2.07□□□□□ -2.08
Scn4aQ9ER60 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Scn4aQ9ER60 Gm22834-201ENSMUST00000102021 79 ntBASIC2.06□□□□□ -2.08
Scn4aQ9ER60 Gm14013-201ENSMUST00000119006 270 ntBASIC2.06□□□□□ -2.08
Scn4aQ9ER60 Gm14765-201ENSMUST00000121954 326 ntBASIC2.06□□□□□ -2.08
Scn4aQ9ER60 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC2.06□□□□□ -2.08
Scn4aQ9ER60 Gm22535-201ENSMUST00000158174 119 ntBASIC2.06□□□□□ -2.08
Scn4aQ9ER60 Gm27313-201ENSMUST00000183500 142 ntBASIC2.06□□□□□ -2.08
Scn4aQ9ER60 Gm28597-201ENSMUST00000187664 666 ntBASIC2.06□□□□□ -2.08
Scn4aQ9ER60 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC2.06□□□□□ -2.08
Scn4aQ9ER60 Gm44358-201ENSMUST00000196301 98 ntBASIC2.06□□□□□ -2.08
Scn4aQ9ER60 Gm42509-201ENSMUST00000197390 781 ntBASIC2.06□□□□□ -2.08
Scn4aQ9ER60 Gm43510-201ENSMUST00000197922 353 ntBASIC2.06□□□□□ -2.08
Scn4aQ9ER60 Gm44459-201ENSMUST00000203926 160 ntBASIC2.06□□□□□ -2.08
Scn4aQ9ER60 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC2.06□□□□□ -2.08
Scn4aQ9ER60 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC2.06□□□□□ -2.08
Scn4aQ9ER60 CT025606.1-201ENSMUST00000218273 324 ntBASIC2.06□□□□□ -2.08
Scn4aQ9ER60 AC117588.2-201ENSMUST00000228340 311 ntBASIC2.06□□□□□ -2.08
Scn4aQ9ER60 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
Scn4aQ9ER60 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Scn4aQ9ER60 Gm24582-201ENSMUST00000103967 103 ntBASIC2.05□□□□□ -2.08
Scn4aQ9ER60 Gm25507-201ENSMUST00000116981 144 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 103.3 ms