Protein–RNA interactions for Protein: Q9EPU0

Upf1, Regulator of nonsense transcripts 1, mousemouse

Known RBP Predictions only

Length 1,124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf1Q9EPU0 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
Upf1Q9EPU0 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Upf1Q9EPU0 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Upf1Q9EPU0 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Upf1Q9EPU0 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC3.86□□□□□ -1.79
Upf1Q9EPU0 Gm23705-201ENSMUST00000104370 130 ntBASIC3.86□□□□□ -1.79
Upf1Q9EPU0 Gm24683-201ENSMUST00000104840 88 ntBASIC3.86□□□□□ -1.79
Upf1Q9EPU0 Gm14586-201ENSMUST00000119571 408 ntBASIC3.86□□□□□ -1.79
Upf1Q9EPU0 Gm22316-201ENSMUST00000158012 216 ntBASIC3.86□□□□□ -1.79
Upf1Q9EPU0 Tshb-202ENSMUST00000170856 552 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Upf1Q9EPU0 Mir3075-201ENSMUST00000175340 85 ntBASIC3.86□□□□□ -1.79
Upf1Q9EPU0 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Upf1Q9EPU0 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Upf1Q9EPU0 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Upf1Q9EPU0 Gm17522-201ENSMUST00000178144 498 ntBASIC3.86□□□□□ -1.79
Upf1Q9EPU0 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Upf1Q9EPU0 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Upf1Q9EPU0 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Upf1Q9EPU0 Gm39380-201ENSMUST00000214710 192 ntTSL 5 BASIC3.86□□□□□ -1.79
Upf1Q9EPU0 CT025619.4-201ENSMUST00000217362 350 ntTSL 2 BASIC3.86□□□□□ -1.79
Upf1Q9EPU0 Gm22979-201ENSMUST00000082609 159 ntBASIC3.86□□□□□ -1.79
Upf1Q9EPU0 Mir181b-2-201ENSMUST00000083644 89 ntBASIC3.86□□□□□ -1.79
Upf1Q9EPU0 Zfp119a-201ENSMUST00000079642 2018 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Upf1Q9EPU0 AC102369.2-201ENSMUST00000219725 1679 ntBASIC3.86□□□□□ -1.79
Upf1Q9EPU0 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Upf1Q9EPU0 Zfp595-203ENSMUST00000168892 4040 ntAPPRIS P2 TSL 1 (best) BASIC3.86□□□□□ -1.79
Upf1Q9EPU0 Gm23322-201ENSMUST00000104464 167 ntBASIC3.85□□□□□ -1.79
Upf1Q9EPU0 Gm15846-201ENSMUST00000116022 320 ntBASIC3.85□□□□□ -1.79
Upf1Q9EPU0 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC3.85□□□□□ -1.79
Upf1Q9EPU0 Gm25280-201ENSMUST00000157269 101 ntBASIC3.85□□□□□ -1.79
Upf1Q9EPU0 Gm24898-201ENSMUST00000158133 106 ntBASIC3.85□□□□□ -1.79
Upf1Q9EPU0 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Upf1Q9EPU0 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Upf1Q9EPU0 Gm20542-201ENSMUST00000174582 372 ntBASIC3.85□□□□□ -1.79
Upf1Q9EPU0 Gm28030-201ENSMUST00000184987 138 ntBASIC3.85□□□□□ -1.79
Upf1Q9EPU0 Gm29657-201ENSMUST00000189807 342 ntBASIC3.85□□□□□ -1.79
Upf1Q9EPU0 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC3.85□□□□□ -1.79
Upf1Q9EPU0 Gm25820-202ENSMUST00000197479 128 ntBASIC3.85□□□□□ -1.79
Upf1Q9EPU0 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC3.85□□□□□ -1.79
Upf1Q9EPU0 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.85□□□□□ -1.79
Upf1Q9EPU0 Gm22443-201ENSMUST00000082890 107 ntBASIC3.85□□□□□ -1.79
Upf1Q9EPU0 Gm23723-201ENSMUST00000082996 132 ntBASIC3.85□□□□□ -1.79
Upf1Q9EPU0 n-R5s182-201ENSMUST00000083889 107 ntBASIC3.85□□□□□ -1.79
Upf1Q9EPU0 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Upf1Q9EPU0 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
Upf1Q9EPU0 Gm21034-201ENSMUST00000207390 2608 ntBASIC3.85□□□□□ -1.79
Upf1Q9EPU0 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC3.85□□□□□ -1.79
Upf1Q9EPU0 Gm44682-201ENSMUST00000208501 2614 ntBASIC3.84□□□□□ -1.79
Upf1Q9EPU0 Olfr59-204ENSMUST00000214048 3363 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
Upf1Q9EPU0 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Upf1Q9EPU0 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
Upf1Q9EPU0 Olfr1354-203ENSMUST00000217073 3792 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
Upf1Q9EPU0 Mir541-201ENSMUST00000102097 90 ntBASIC3.84□□□□□ -1.79
Upf1Q9EPU0 Gm13167-201ENSMUST00000118554 578 ntBASIC3.84□□□□□ -1.79
Upf1Q9EPU0 Gm22315-201ENSMUST00000158010 143 ntBASIC3.84□□□□□ -1.79
Upf1Q9EPU0 Mir6370-201ENSMUST00000183510 120 ntBASIC3.84□□□□□ -1.79
Upf1Q9EPU0 Gm27699-201ENSMUST00000183553 180 ntBASIC3.84□□□□□ -1.79
Upf1Q9EPU0 Gm19123-201ENSMUST00000190716 651 ntBASIC3.84□□□□□ -1.79
Upf1Q9EPU0 Trbv6-201ENSMUST00000193743 276 ntBASIC3.84□□□□□ -1.79
Upf1Q9EPU0 4930520P13Rik-201ENSMUST00000222622 505 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Upf1Q9EPU0 AC115735.2-201ENSMUST00000227135 351 ntBASIC3.84□□□□□ -1.79
Upf1Q9EPU0 AC135292.1-201ENSMUST00000227665 204 ntBASIC3.84□□□□□ -1.79
Upf1Q9EPU0 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Upf1Q9EPU0 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Upf1Q9EPU0 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
Upf1Q9EPU0 AC164297.1-201ENSMUST00000224484 1561 ntBASIC3.84□□□□□ -1.8
Upf1Q9EPU0 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
Upf1Q9EPU0 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
Upf1Q9EPU0 Gm42447-201ENSMUST00000200102 2903 ntBASIC3.83□□□□□ -1.8
Upf1Q9EPU0 Gm37061-201ENSMUST00000195066 3243 ntBASIC3.83□□□□□ -1.8
Upf1Q9EPU0 Mir291a-201ENSMUST00000104815 82 ntBASIC3.83□□□□□ -1.8
Upf1Q9EPU0 Gm25805-201ENSMUST00000122788 108 ntBASIC3.83□□□□□ -1.8
Upf1Q9EPU0 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC3.83□□□□□ -1.8
Upf1Q9EPU0 Gm22722-201ENSMUST00000157467 132 ntBASIC3.83□□□□□ -1.8
Upf1Q9EPU0 Gm22187-201ENSMUST00000157819 129 ntBASIC3.83□□□□□ -1.8
Upf1Q9EPU0 Gm22833-201ENSMUST00000158292 132 ntBASIC3.83□□□□□ -1.8
Upf1Q9EPU0 Gm25642-201ENSMUST00000175137 66 ntBASIC3.83□□□□□ -1.8
Upf1Q9EPU0 Gm25235-201ENSMUST00000179933 107 ntBASIC3.83□□□□□ -1.8
Upf1Q9EPU0 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Upf1Q9EPU0 Ighv12-2-201ENSMUST00000191949 362 ntBASIC3.83□□□□□ -1.8
Upf1Q9EPU0 Mir376a-201ENSMUST00000197584 68 ntBASIC3.83□□□□□ -1.8
Upf1Q9EPU0 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Upf1Q9EPU0 Gm35857-201ENSMUST00000212739 178 ntBASIC3.83□□□□□ -1.8
Upf1Q9EPU0 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Upf1Q9EPU0 2210407C18Rik-201ENSMUST00000048801 876 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Upf1Q9EPU0 Gm26327-201ENSMUST00000093724 111 ntBASIC3.83□□□□□ -1.8
Upf1Q9EPU0 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Upf1Q9EPU0 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Upf1Q9EPU0 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC3.82□□□□□ -1.8
Upf1Q9EPU0 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Upf1Q9EPU0 Mir297a-2-201ENSMUST00000103795 90 ntBASIC3.82□□□□□ -1.8
Upf1Q9EPU0 Gm24116-201ENSMUST00000103975 107 ntBASIC3.82□□□□□ -1.8
Upf1Q9EPU0 Mdga2-203ENSMUST00000113942 423 ntBASIC3.82□□□□□ -1.8
Upf1Q9EPU0 Gm11460-201ENSMUST00000118200 361 ntBASIC3.82□□□□□ -1.8
Upf1Q9EPU0 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC3.82□□□□□ -1.8
Upf1Q9EPU0 Gm23982-201ENSMUST00000157141 106 ntBASIC3.82□□□□□ -1.8
Upf1Q9EPU0 Gm23640-201ENSMUST00000157860 104 ntBASIC3.82□□□□□ -1.8
Upf1Q9EPU0 Gm16584-201ENSMUST00000159267 189 ntBASIC3.82□□□□□ -1.8
Upf1Q9EPU0 Gm16567-201ENSMUST00000160967 576 ntTSL 5 BASIC3.82□□□□□ -1.8
Upf1Q9EPU0 Gm26297-201ENSMUST00000179464 132 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms