Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm22678-201ENSMUST00000116974 101 ntBASIC1.59□□□□□ -2.15
Cdc40Q9DC48 Gm8858-201ENSMUST00000118259 342 ntBASIC1.59□□□□□ -2.15
Cdc40Q9DC48 Gm12053-201ENSMUST00000119022 252 ntBASIC1.59□□□□□ -2.15
Cdc40Q9DC48 Gm14402-201ENSMUST00000122217 508 ntBASIC1.59□□□□□ -2.15
Cdc40Q9DC48 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC1.59□□□□□ -2.15
Cdc40Q9DC48 Gm29134-201ENSMUST00000186579 126 ntBASIC1.59□□□□□ -2.15
Cdc40Q9DC48 Gm28337-201ENSMUST00000190425 666 ntBASIC1.59□□□□□ -2.15
Cdc40Q9DC48 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC1.59□□□□□ -2.15
Cdc40Q9DC48 Gm37923-201ENSMUST00000191624 161 ntBASIC1.59□□□□□ -2.15
Cdc40Q9DC48 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC1.59□□□□□ -2.15
Cdc40Q9DC48 Gm31123-201ENSMUST00000192094 666 ntBASIC1.59□□□□□ -2.15
Cdc40Q9DC48 Gm29950-201ENSMUST00000195273 237 ntBASIC1.59□□□□□ -2.15
Cdc40Q9DC48 Gm36992-201ENSMUST00000195463 428 ntTSL 3 BASIC1.59□□□□□ -2.15
Cdc40Q9DC48 Gm43676-201ENSMUST00000197532 540 ntBASIC1.59□□□□□ -2.15
Cdc40Q9DC48 Mir3087-201ENSMUST00000199405 56 ntBASIC1.59□□□□□ -2.15
Cdc40Q9DC48 Gm44142-201ENSMUST00000203358 311 ntBASIC1.59□□□□□ -2.15
Cdc40Q9DC48 Gm44564-201ENSMUST00000207985 180 ntBASIC1.59□□□□□ -2.15
Cdc40Q9DC48 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
Cdc40Q9DC48 Gm45754-201ENSMUST00000212380 279 ntBASIC1.59□□□□□ -2.15
Cdc40Q9DC48 AC153541.1-201ENSMUST00000213786 294 ntBASIC1.59□□□□□ -2.15
Cdc40Q9DC48 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC1.59□□□□□ -2.15
Cdc40Q9DC48 AC124569.4-201ENSMUST00000223830 1220 ntBASIC1.59□□□□□ -2.15
Cdc40Q9DC48 AC132918.1-201ENSMUST00000227877 925 ntBASIC1.59□□□□□ -2.15
Cdc40Q9DC48 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Cdc40Q9DC48 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
Cdc40Q9DC48 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
Cdc40Q9DC48 Mir873a-201ENSMUST00000104863 77 ntBASIC1.58□□□□□ -2.16
Cdc40Q9DC48 Gm15266-201ENSMUST00000119635 255 ntBASIC1.58□□□□□ -2.16
Cdc40Q9DC48 Gm25625-201ENSMUST00000157221 96 ntBASIC1.58□□□□□ -2.16
Cdc40Q9DC48 Igkv13-55-1-201ENSMUST00000200400 308 ntBASIC1.58□□□□□ -2.16
Cdc40Q9DC48 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC1.58□□□□□ -2.16
Cdc40Q9DC48 Gm44128-201ENSMUST00000204909 219 ntBASIC1.58□□□□□ -2.16
Cdc40Q9DC48 Gm44644-201ENSMUST00000207994 642 ntTSL 3 BASIC1.58□□□□□ -2.16
Cdc40Q9DC48 AC166830.2-201ENSMUST00000225821 196 ntBASIC1.58□□□□□ -2.16
Cdc40Q9DC48 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
Cdc40Q9DC48 Gm10719-201ENSMUST00000099047 681 ntAPPRIS P5 TSL 5 BASIC1.58□□□□□ -2.16
Cdc40Q9DC48 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.57□□□□□ -2.16
Cdc40Q9DC48 Gm22761-201ENSMUST00000102278 96 ntBASIC1.57□□□□□ -2.16
Cdc40Q9DC48 Gm24892-201ENSMUST00000122747 104 ntBASIC1.57□□□□□ -2.16
Cdc40Q9DC48 Gm22217-201ENSMUST00000157556 313 ntBASIC1.57□□□□□ -2.16
Cdc40Q9DC48 Gm24885-201ENSMUST00000158783 270 ntBASIC1.57□□□□□ -2.16
Cdc40Q9DC48 Gm16577-201ENSMUST00000161579 471 ntTSL 3 BASIC1.57□□□□□ -2.16
Cdc40Q9DC48 Gm24333-201ENSMUST00000175101 84 ntBASIC1.57□□□□□ -2.16
Cdc40Q9DC48 Gm25933-201ENSMUST00000178943 108 ntBASIC1.57□□□□□ -2.16
Cdc40Q9DC48 Gm9892-201ENSMUST00000182415 992 ntBASIC1.57□□□□□ -2.16
Cdc40Q9DC48 Gm28404-201ENSMUST00000190242 453 ntBASIC1.57□□□□□ -2.16
Cdc40Q9DC48 Gm44384-201ENSMUST00000200208 114 ntBASIC1.57□□□□□ -2.16
Cdc40Q9DC48 Gm44923-201ENSMUST00000206673 85 ntBASIC1.57□□□□□ -2.16
Cdc40Q9DC48 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC1.57□□□□□ -2.16
Cdc40Q9DC48 AC188459.1-201ENSMUST00000216651 300 ntBASIC1.57□□□□□ -2.16
Cdc40Q9DC48 AC153141.1-201ENSMUST00000218636 501 ntBASIC1.57□□□□□ -2.16
Cdc40Q9DC48 AC164304.1-201ENSMUST00000226920 272 ntBASIC1.57□□□□□ -2.16
Cdc40Q9DC48 AC027184.1-201ENSMUST00000226991 424 ntBASIC1.57□□□□□ -2.16
Cdc40Q9DC48 Gm22062-201ENSMUST00000082563 107 ntBASIC1.57□□□□□ -2.16
Cdc40Q9DC48 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
Cdc40Q9DC48 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
Cdc40Q9DC48 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
Cdc40Q9DC48 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC1.56□□□□□ -2.16
Cdc40Q9DC48 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Cdc40Q9DC48 Gm13153-201ENSMUST00000120969 637 ntBASIC1.56□□□□□ -2.16
Cdc40Q9DC48 Gm25102-201ENSMUST00000122479 112 ntBASIC1.56□□□□□ -2.16
Cdc40Q9DC48 Gm25052-201ENSMUST00000122661 158 ntBASIC1.56□□□□□ -2.16
Cdc40Q9DC48 Gm24076-201ENSMUST00000158179 94 ntBASIC1.56□□□□□ -2.16
Cdc40Q9DC48 Gm22386-201ENSMUST00000158192 129 ntBASIC1.56□□□□□ -2.16
Cdc40Q9DC48 Gm24084-201ENSMUST00000175173 137 ntBASIC1.56□□□□□ -2.16
Cdc40Q9DC48 Snord87-201ENSMUST00000175437 87 ntBASIC1.56□□□□□ -2.16
Cdc40Q9DC48 Gm22166-201ENSMUST00000178419 121 ntBASIC1.56□□□□□ -2.16
Cdc40Q9DC48 Gm23288-201ENSMUST00000179213 121 ntBASIC1.56□□□□□ -2.16
Cdc40Q9DC48 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC1.56□□□□□ -2.16
Cdc40Q9DC48 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.56□□□□□ -2.16
Cdc40Q9DC48 Gm44693-201ENSMUST00000208141 460 ntTSL 3 BASIC1.56□□□□□ -2.16
Cdc40Q9DC48 Gm44666-201ENSMUST00000208544 391 ntBASIC1.56□□□□□ -2.16
Cdc40Q9DC48 AC158597.1-201ENSMUST00000216234 150 ntBASIC1.56□□□□□ -2.16
Cdc40Q9DC48 AC130829.3-201ENSMUST00000222735 154 ntBASIC1.56□□□□□ -2.16
Cdc40Q9DC48 Gm10360-201ENSMUST00000097219 272 ntBASIC1.56□□□□□ -2.16
Cdc40Q9DC48 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
Cdc40Q9DC48 Gm22551-201ENSMUST00000157795 103 ntBASIC1.55□□□□□ -2.16
Cdc40Q9DC48 Gm24222-201ENSMUST00000158834 93 ntBASIC1.55□□□□□ -2.16
Cdc40Q9DC48 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
Cdc40Q9DC48 Gm22800-201ENSMUST00000175627 94 ntBASIC1.55□□□□□ -2.16
Cdc40Q9DC48 Gm24388-201ENSMUST00000177872 107 ntBASIC1.55□□□□□ -2.16
Cdc40Q9DC48 Gm22851-201ENSMUST00000178741 94 ntBASIC1.55□□□□□ -2.16
Cdc40Q9DC48 Gm25074-201ENSMUST00000178782 94 ntBASIC1.55□□□□□ -2.16
Cdc40Q9DC48 Gm27755-201ENSMUST00000184623 132 ntBASIC1.55□□□□□ -2.16
Cdc40Q9DC48 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.55□□□□□ -2.16
Cdc40Q9DC48 Gm29350-201ENSMUST00000189141 541 ntBASIC1.55□□□□□ -2.16
Cdc40Q9DC48 Gm43680-201ENSMUST00000199466 340 ntBASIC1.55□□□□□ -2.16
Cdc40Q9DC48 CT009696.2-201ENSMUST00000216668 432 ntBASIC1.55□□□□□ -2.16
Cdc40Q9DC48 AC157017.1-201ENSMUST00000220148 364 ntBASIC1.55□□□□□ -2.16
Cdc40Q9DC48 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC1.55□□□□□ -2.16
Cdc40Q9DC48 AC192333.2-201ENSMUST00000224771 196 ntBASIC1.55□□□□□ -2.16
Cdc40Q9DC48 AC154484.1-201ENSMUST00000227311 771 ntBASIC1.55□□□□□ -2.16
Cdc40Q9DC48 Gm26080-201ENSMUST00000104069 131 ntBASIC1.54□□□□□ -2.16
Cdc40Q9DC48 Gm25832-201ENSMUST00000104140 130 ntBASIC1.54□□□□□ -2.16
Cdc40Q9DC48 n-R5s207-201ENSMUST00000122497 118 ntBASIC1.54□□□□□ -2.16
Cdc40Q9DC48 Gm22631-201ENSMUST00000179656 94 ntBASIC1.54□□□□□ -2.16
Cdc40Q9DC48 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC1.54□□□□□ -2.16
Cdc40Q9DC48 Mir6341-201ENSMUST00000183490 121 ntBASIC1.54□□□□□ -2.16
Cdc40Q9DC48 Mir7241-201ENSMUST00000184532 64 ntBASIC1.54□□□□□ -2.16
Cdc40Q9DC48 Gm6657-203ENSMUST00000188791 531 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 128.3 ms