Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Gm12372-201ENSMUST00000121654 768 ntBASIC1.43□□□□□ -2.18
Chmp2aQ9DB34 Gm24892-201ENSMUST00000122747 104 ntBASIC1.43□□□□□ -2.18
Chmp2aQ9DB34 Gm6956-201ENSMUST00000134724 546 ntBASIC1.43□□□□□ -2.18
Chmp2aQ9DB34 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC1.43□□□□□ -2.18
Chmp2aQ9DB34 Gm22963-201ENSMUST00000157960 91 ntBASIC1.43□□□□□ -2.18
Chmp2aQ9DB34 Gm23862-201ENSMUST00000180342 94 ntBASIC1.43□□□□□ -2.18
Chmp2aQ9DB34 Mir3961-201ENSMUST00000198795 59 ntBASIC1.43□□□□□ -2.18
Chmp2aQ9DB34 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC1.43□□□□□ -2.18
Chmp2aQ9DB34 AC102352.1-201ENSMUST00000224187 582 ntBASIC1.43□□□□□ -2.18
Chmp2aQ9DB34 AC138667.2-201ENSMUST00000224880 598 ntBASIC1.43□□□□□ -2.18
Chmp2aQ9DB34 CT010506.2-201ENSMUST00000225618 183 ntBASIC1.43□□□□□ -2.18
Chmp2aQ9DB34 CT009550.5-201ENSMUST00000226286 382 ntBASIC1.43□□□□□ -2.18
Chmp2aQ9DB34 Gm16976-205ENSMUST00000227324 226 ntBASIC1.43□□□□□ -2.18
Chmp2aQ9DB34 AC102291.2-201ENSMUST00000228083 367 ntBASIC1.43□□□□□ -2.18
Chmp2aQ9DB34 Gm25582-201ENSMUST00000083412 110 ntBASIC1.43□□□□□ -2.18
Chmp2aQ9DB34 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
Chmp2aQ9DB34 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC1.42□□□□□ -2.18
Chmp2aQ9DB34 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.42□□□□□ -2.18
Chmp2aQ9DB34 Gm20689-201ENSMUST00000176033 279 ntBASIC1.42□□□□□ -2.18
Chmp2aQ9DB34 Gm18396-201ENSMUST00000177095 361 ntBASIC1.42□□□□□ -2.18
Chmp2aQ9DB34 Gm23619-201ENSMUST00000178411 94 ntBASIC1.42□□□□□ -2.18
Chmp2aQ9DB34 Gm25474-201ENSMUST00000179052 94 ntBASIC1.42□□□□□ -2.18
Chmp2aQ9DB34 Gm22047-201ENSMUST00000179176 94 ntBASIC1.42□□□□□ -2.18
Chmp2aQ9DB34 Gm24306-201ENSMUST00000180229 79 ntBASIC1.42□□□□□ -2.18
Chmp2aQ9DB34 Gm29155-202ENSMUST00000186289 216 ntTSL 5 BASIC1.42□□□□□ -2.18
Chmp2aQ9DB34 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC1.42□□□□□ -2.18
Chmp2aQ9DB34 AC116726.2-201ENSMUST00000217629 986 ntBASIC1.42□□□□□ -2.18
Chmp2aQ9DB34 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
Chmp2aQ9DB34 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
Chmp2aQ9DB34 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Chmp2aQ9DB34 Nell1os-202ENSMUST00000136672 491 ntTSL 5 BASIC1.41□□□□□ -2.18
Chmp2aQ9DB34 Gm6182-201ENSMUST00000156439 1208 ntBASIC1.41□□□□□ -2.18
Chmp2aQ9DB34 Gm20613-201ENSMUST00000175828 345 ntBASIC1.41□□□□□ -2.18
Chmp2aQ9DB34 Mir6355-201ENSMUST00000183687 106 ntBASIC1.41□□□□□ -2.18
Chmp2aQ9DB34 Gm29134-201ENSMUST00000186579 126 ntBASIC1.41□□□□□ -2.18
Chmp2aQ9DB34 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
Chmp2aQ9DB34 Gm28337-201ENSMUST00000190425 666 ntBASIC1.41□□□□□ -2.18
Chmp2aQ9DB34 Gm37923-201ENSMUST00000191624 161 ntBASIC1.41□□□□□ -2.18
Chmp2aQ9DB34 Gm31123-201ENSMUST00000192094 666 ntBASIC1.41□□□□□ -2.18
Chmp2aQ9DB34 Gm44870-201ENSMUST00000207291 357 ntBASIC1.41□□□□□ -2.18
Chmp2aQ9DB34 Gm44910-201ENSMUST00000208451 396 ntBASIC1.41□□□□□ -2.18
Chmp2aQ9DB34 AC157654.1-201ENSMUST00000224130 820 ntBASIC1.41□□□□□ -2.18
Chmp2aQ9DB34 AC154424.1-201ENSMUST00000225883 799 ntBASIC1.41□□□□□ -2.18
Chmp2aQ9DB34 Gm14390-201ENSMUST00000117505 1695 ntBASIC1.41□□□□□ -2.18
Chmp2aQ9DB34 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC1.4□□□□□ -2.19
Chmp2aQ9DB34 Gm7916-201ENSMUST00000120325 456 ntBASIC1.4□□□□□ -2.19
Chmp2aQ9DB34 Gm24910-201ENSMUST00000157289 272 ntBASIC1.4□□□□□ -2.19
Chmp2aQ9DB34 Gm23221-201ENSMUST00000158118 93 ntBASIC1.4□□□□□ -2.19
Chmp2aQ9DB34 Gm24348-201ENSMUST00000158710 130 ntBASIC1.4□□□□□ -2.19
Chmp2aQ9DB34 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
Chmp2aQ9DB34 Mir6419-201ENSMUST00000184784 113 ntBASIC1.4□□□□□ -2.19
Chmp2aQ9DB34 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC1.4□□□□□ -2.19
Chmp2aQ9DB34 Gm28474-201ENSMUST00000188501 315 ntBASIC1.4□□□□□ -2.19
Chmp2aQ9DB34 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC1.4□□□□□ -2.19
Chmp2aQ9DB34 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
Chmp2aQ9DB34 AC069561.2-201ENSMUST00000217596 420 ntBASIC1.4□□□□□ -2.19
Chmp2aQ9DB34 Mir16-2-201ENSMUST00000083672 95 ntBASIC1.4□□□□□ -2.19
Chmp2aQ9DB34 Gm42639-201ENSMUST00000197061 1871 ntBASIC1.39□□□□□ -2.19
Chmp2aQ9DB34 Gm12779-201ENSMUST00000121496 143 ntBASIC1.39□□□□□ -2.19
Chmp2aQ9DB34 Gm25059-201ENSMUST00000157367 117 ntBASIC1.39□□□□□ -2.19
Chmp2aQ9DB34 Snord13-201ENSMUST00000157627 104 ntBASIC1.39□□□□□ -2.19
Chmp2aQ9DB34 Gm22075-201ENSMUST00000158599 192 ntBASIC1.39□□□□□ -2.19
Chmp2aQ9DB34 Gm24229-201ENSMUST00000158830 118 ntBASIC1.39□□□□□ -2.19
Chmp2aQ9DB34 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
Chmp2aQ9DB34 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
Chmp2aQ9DB34 Gm22862-201ENSMUST00000178593 121 ntBASIC1.39□□□□□ -2.19
Chmp2aQ9DB34 Gm43723-201ENSMUST00000196886 189 ntBASIC1.39□□□□□ -2.19
Chmp2aQ9DB34 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC1.39□□□□□ -2.19
Chmp2aQ9DB34 AC154552.7-201ENSMUST00000222824 156 ntBASIC1.39□□□□□ -2.19
Chmp2aQ9DB34 AC168062.3-201ENSMUST00000227025 165 ntBASIC1.39□□□□□ -2.19
Chmp2aQ9DB34 Gm24707-201ENSMUST00000082812 107 ntBASIC1.39□□□□□ -2.19
Chmp2aQ9DB34 Gm25007-201ENSMUST00000083808 133 ntBASIC1.39□□□□□ -2.19
Chmp2aQ9DB34 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
Chmp2aQ9DB34 Gm14007-201ENSMUST00000118288 210 ntBASIC1.38□□□□□ -2.19
Chmp2aQ9DB34 Gm11857-201ENSMUST00000119817 324 ntBASIC1.38□□□□□ -2.19
Chmp2aQ9DB34 Gm11359-201ENSMUST00000120039 567 ntBASIC1.38□□□□□ -2.19
Chmp2aQ9DB34 Gm24480-201ENSMUST00000157442 103 ntBASIC1.38□□□□□ -2.19
Chmp2aQ9DB34 Gm23090-201ENSMUST00000177331 78 ntBASIC1.38□□□□□ -2.19
Chmp2aQ9DB34 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC1.38□□□□□ -2.19
Chmp2aQ9DB34 Ighv12-1-201ENSMUST00000195542 329 ntBASIC1.38□□□□□ -2.19
Chmp2aQ9DB34 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC1.38□□□□□ -2.19
Chmp2aQ9DB34 AC093316.2-201ENSMUST00000220015 172 ntTSL 5 BASIC1.38□□□□□ -2.19
Chmp2aQ9DB34 AC120553.1-201ENSMUST00000227313 260 ntBASIC1.38□□□□□ -2.19
Chmp2aQ9DB34 Gm22578-201ENSMUST00000083730 107 ntBASIC1.38□□□□□ -2.19
Chmp2aQ9DB34 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.38□□□□□ -2.19
Chmp2aQ9DB34 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
Chmp2aQ9DB34 Gm15077-201ENSMUST00000122344 362 ntBASIC1.37□□□□□ -2.19
Chmp2aQ9DB34 Gm24517-201ENSMUST00000122560 107 ntBASIC1.37□□□□□ -2.19
Chmp2aQ9DB34 n-R5s150-201ENSMUST00000122705 108 ntBASIC1.37□□□□□ -2.19
Chmp2aQ9DB34 Gm24896-201ENSMUST00000122741 135 ntBASIC1.37□□□□□ -2.19
Chmp2aQ9DB34 Gm22559-201ENSMUST00000157329 134 ntBASIC1.37□□□□□ -2.19
Chmp2aQ9DB34 Gm23331-201ENSMUST00000157423 108 ntBASIC1.37□□□□□ -2.19
Chmp2aQ9DB34 Mir7009-201ENSMUST00000184519 64 ntBASIC1.37□□□□□ -2.19
Chmp2aQ9DB34 Gm28151-201ENSMUST00000189404 951 ntBASIC1.37□□□□□ -2.19
Chmp2aQ9DB34 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC1.37□□□□□ -2.19
Chmp2aQ9DB34 Gm44320-201ENSMUST00000199276 86 ntBASIC1.37□□□□□ -2.19
Chmp2aQ9DB34 AC167192.4-201ENSMUST00000224087 993 ntBASIC1.37□□□□□ -2.19
Chmp2aQ9DB34 Gm24921-201ENSMUST00000083024 107 ntBASIC1.37□□□□□ -2.19
Chmp2aQ9DB34 Gm23462-201ENSMUST00000083264 104 ntBASIC1.37□□□□□ -2.19
Chmp2aQ9DB34 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 137.1 ms